Structure of the soluble domain of cytochrome c552 from Paracoccus denitrificans in the oxidized and reduced states

Journal of Molecular Biology

Volumn 295, Issue 3, 2000, Pages 667-678

  Harrenga, Axel ^a   Reincke, Britta ^b   Rüterjans, Heinrich ^b   Ludwig, Bernd ^b   Michel, Hartmut ^a  

^a MAX PLANCK INSTITUTE OF BIOPHYSICS   (Germany)

^b GOETHE UNIVERSITY   (Germany)

Author keywords

Cytochrome c; Heme; Low salt; Paracoccus denitrificans; Structure

Indexed keywords

BACTERIAL ENZYME; CYTOCHROME;

ARTICLE; CRYSTAL STRUCTURE; ENZYME ANALYSIS; ENZYME STRUCTURE; NONHUMAN; OXIDATION REDUCTION STATE; PARACOCCUS DENITRIFICANS; PRIORITY JOURNAL; PROTEIN DOMAIN; STRUCTURE ANALYSIS;

BACTERIA (MICROORGANISMS); EUKARYOTA; PARACOCCUS DENITRIFICANS;

EID: 0034695429     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1999.3382     Document Type: Article

References (49)

1. 1 ATPase
2. Molecular genetics of the genus Paracoccus: Metabolically versatile bacteria with bioenergetic flexibility
3. Oxidation state-dependent conformational changes in cytochrome c
4. 3 complexes
5. The free R value: A novel statistical quantity for assessing the accuracy of crystal structures
6. Crystallography and NMR System: A new software suite for macromolecular structure determination
7. High-resolution three-dimensional structure of horse heart cytohrome c
8. The CCP4 suite: Programs for protein crystallography
9. Maximum likelihood heavy atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods
10. Increase in apparent compressibility of cytochrome c upon oxidation
11. Accurate bond and angle parameters for X-ray protein structure refinement
12. Hardware lighted three-dimensional solid model representations of macromolecules
13. Salt-dependent structure change and ion binding in cytochrome c studied by two-dimensional proton NMR
14. Redox-dependent structure change and hyperfine nuclear magnetic resonance shifts in cytochrome c
15. Definition of cytochrome c binding domains by chemical modification
16. Assignment of cytochrome hemes in crystallized reaction centers from Rhodopseudomonas viridis
17. 3 has a third subunit
18. Ionic strength dependence of the kinetics of electron transfer from bovine mitochondrial cytochrome c to bovine mitochondrial cytochrome c oxidase
19. Determination of macromolecular structures from anomalous diffraction of synchrotron radiation
20. Errors in protein structures
21. Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans
22. Improved methods for building protein models in electron density maps and the location of errors in these models
23. Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
24. Extended X-ray absorption fine structure studies of cytochrome c: Structural aspects of oxidation-reduction
25. MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
26. The coupling of light-induced electron transfer and proton uptake as derived from crystal structures of reaction centres from Rhodopseudomonas viridis modified at the binding site of the secondary quinone, Q(B)
27. PROCHECK: A program to check the stereochemical quality of protein structures
28. High-resolution refinement of yeast iso-1-cytochrome c and comparisons with other eukaryotic cytochromes c
29. Guided by electrostatics a textbook protein comes of age
30. Structure of the cytochrome c-551 from Ps. aeruginosa refined at 1.6 Å resolution and comparison of the two redox forms
31. Solvent content of protein crystals
32. Raster3D Version 2.0 - A program for photorealistic molecular graphics
33. Control of redox properties of cytochrome c by special electrostatic interactions
34. Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
35. Structure at 2.7 Å resolution of the Paracoccus denitrificans two-subunit cytochrome c oxidase complexed with an antibody F(V) fragment
36. Processing of X-ray diffraction data collected in oscillation mode
37. Crystal structure of a complex between electron transfer partners, cytochrome c peroxidase and cytochrome c
38. 552 acting as electron donor to the Paracoccus denitrificans cytochrome c oxidase
39. 1. Differential acetylation of lysyl residues in free and complexed cytochrome c
40. Structural bases for function in cytochromes c
41. The low ionic strength crystal structure of horse cytochrome c at 2.1 Å resolution and comparison with its high ionic strength counterpart
42. Conformation change of cytochrome c: (I) ferrocytochrome c structure refined at 1.5 Å resolution
43. Conformation change of cytochrome c: (II) ferricytochrome c refined at 1.8 Å and comparison with the ferrocytochrome structure
44. Differences in the solution structures of oxidized and reduced cytochrome c measured by small-angle X-ray scattering
45. 552 and sequence analysis of the gene
46. LIGPLOT - A program to generate schematic diagrams of protein ligand interactions
47. Two-dimensional 1H NMR studies of cytochrome c: Hydrogen exchange in the N-terminal helix
48. Cytochrome-c-binding site on cytochrome oxidase in Paracoccus denitrificans