Distances between DNA and ATP binding sites in the TyrR-DNA complex

Biochemistry

Volumn 39, Issue 19, 2000, Pages 5653-5661

  Sawyer, William H ^a   Chan, Robert Y S ^a   Eccleston, John F ^b   Davidson, Barrie E ^a   Samat, Saiffudin A ^a   Yan, Yuling ^c  

^a UNIVERSITY OF MELBOURNE   (Australia)

^b NATIONAL INSTITUTE FOR MEDICAL RESEARCH   (United Kingdom)

^c MAX PLANCK INSTITUTE OF BIOCHEMISTRY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATE; DNA; REGULATOR PROTEIN;

ANISOTROPY; ARTICLE; BINDING AFFINITY; BINDING SITE; COMPLEX FORMATION; DISSOCIATION CONSTANT; DNA DETERMINATION; ENERGY TRANSFER; FLUORESCENCE ANALYSIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING;

ADENOSINE TRIPHOSPHATE; BINDING SITES; DNA, BACTERIAL; ENERGY TRANSFER; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; FLUORESCENCE POLARIZATION; MACROMOLECULAR SUBSTANCES; MODELS, MOLECULAR; OLIGONUCLEOTIDES; REPRESSOR PROTEINS; RHODAMINES; SPECTROMETRY, FLUORESCENCE;

EID: 0034673993     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi0000723     Document Type: Article

References (27)

1. Pittard, A. J., and Davidson, B. E. (1991) Mol. Microbiol. 5, 1585-1592.
2. Pittard, A. J. (1996) in Escherichia coli and Salmonella: Cellular and Molecular Biology (Neidhardt, F. C., Curtiss, R., Ingraham, J. L., Lin, E. C. C., Low, K. B., Magasanik, B., Reznikoff, W. S., Riley, M., Schaechter, M., and Umbarger, H. E., Eds.) pp 458-484, ASM Press, Washington, DC.
3. Wilson, T. J., Maroudas, P., Howlett, G. J., and Davidson, B. E. (1994) J. Mol. Biol. 238, 308-319.
4. Argaet, V. P., Wilson, T. J., and Davidson, B. E. (1994) J. Biol. Chem. 269, 5171-5178.
5. Cui, J., and Somerville, R. L. (1993) J. Biol. Chem. 268, 5040-5047.
6. Yang, J., Ganesan, S., Sarsero, J., and Pittard, A. J. (1993) J. Bacteriol. 175, 1767-1776.
7. Yang, J., Camakaris, H., and Pittard, A. J. (1993) J. Bacteriol. 175, 6372-6375.
8. Wilson, T. J., Argaet, V. P., Howlett, G. J., and Davidson, B. E. (1995) Mol. Microbiol. 17, 483-492.
9. Walker, J. E., Saraste, M., Runswick, M. J., and Gay, N. J. (1982) EMBO J. 8, 945-951.
10. Henijoff, S., and Wallace, J. C. (1988) Nucleic Acids Res. 16, 6191-6204.
11. Morett, E., and Segovia, L. (1993) J. Bacteriol. 175, 6067-6074.
12. Kwok, T., Yang, J., Pittard, A. J., Wilson, T. J., and Davidson, B. E. (1995) Mol. Microbiol. 17, 471-481.
13. Bailey, M. F., Davidson, B. E., Haralambidis, J., Kwok, T., and Sawyer, W. H. (1998) Biochemistry 37, 7431-7443.
14. Andrews, A. E., Lawley, B., and Pittard, A. J. (1991) J. Bacteriol. 173, 5068-5078.
15. Andrews, A. E., Dickson, B., Lawley, B., Cobbett, C., and Pittard, A. J. (1991) J. Bacteriol. 173, 5079-5085.
16. Hwang, J. S., Yang, J., and Pittard, A. J. (1997) J. Bacteriol. 179, 1051-1058.
17. Hwang, J. S., Yang, J., and Pittard, A. J. (1999) J. Bacteriol. 181, 6411-6418.
18. Bailey, M. F., Hagmar, P., Millar, D. P., Davidson, B. E., Tong, G., and Haralambidis, J. (1995) Biochemistry 34, 15802-15812.
19. Clegg, R. M. (1992) Methods Enzymol. 211, 353-388.
20. Van der Meer, B. W., Coker, G., and Chen, S.-Y. (1994) Resonance Energy Transfer. Theory and Data, VCH, New York.
21. Heyduk, T., and Lee, J. C. (1992) Biochemistry 31, 5165-5171.
22. Furey, W. S., Joyce, C. M., Osborne, M. A., Klenerman, D., Peliska, J. A., and Balasubramanian, S. (1998) Biochemistry 37, 2979-2990.
23. Jameson, D. M., and Eccleston, J. F. (1997) Methods Enzymol. 278, 363-390.
24. Hagmar, P., Bailey, M., Tong, G., Haralambidis, J., Sawyer, W. H., and Davidson, B. E. (1995) Biochim. Biophys. Acta 1244, 259-268.
25. Corrie, J. E. T., Eccleston, J. F., Danter, Z., Moore, M. H., and Turkenbery, J. P. (1998) Biophys. J. 74, A180.
26. Weber, G., and Teale, F. W. J. (1956) Trans. Faraday Soc. 53, 646-655.
27. Stryer, L. (1978) Annu. Rev. Biochem. 47, 819-846.