메뉴 건너뛰기




Volumn 19, Issue 4, 2000, Pages 776-785

Tn 10 transpososome assembly involves a folded intermediate that must be unfolded for target capture and strand transfer

Author keywords

IHF; Tn10; Transposition

Indexed keywords

ARTICLE; CONTROLLED STUDY; DNA CLEAVAGE; DNA FOOTPRINTING; DNA PROTEIN COMPLEX; DNA TRANSFER; DNA TRANSPOSITION; MOLECULAR INTERACTION; MORPHOGENESIS; NONHUMAN; PRIORITY JOURNAL; STRUCTURE ACTIVITY RELATION; TRANSPOSON; BINDING SITE; BIOLOGICAL MODEL; CHEMISTRY; CONFORMATION; ESCHERICHIA COLI; GENETICS; METABOLISM; NUCLEOTIDE SEQUENCE; PROTEIN BINDING; PROTEIN CONFORMATION;

EID: 0034651857     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/19.4.776     Document Type: Article
Times cited : (26)

References (27)
  • 1
    • 0003377345 scopus 로고    scopus 로고
    • Insertion sequences and transposons
    • Charlebois, R.L. (ed.). American Society for Microbiology, Washington, DC
    • Chalmers, R. and. Blot, M. (1999) Insertion sequences and transposons. In Charlebois, R.L. (ed.), Organization of the Prokaryotic Genome. American Society for Microbiology, Washington, DC, pp. 151-169.
    • (1999) Organization of the Prokaryotic Genome , pp. 151-169
    • Chalmers, R.1    Blot, M.2
  • 2
    • 0032577448 scopus 로고    scopus 로고
    • IHF modulation of Tn10 transposition: Sensory transduction of supercoiling status via a proposed protein-DNA molecular spring
    • Chalmers, R., Guhathakurta, A., Benjamin, H. and Kleckner, N. (1998) IHF modulation of Tn10 transposition: sensory transduction of supercoiling status via a proposed protein-DNA molecular spring. Cell, 93, 897-908.
    • (1998) Cell , vol.93 , pp. 897-908
    • Chalmers, R.1    Guhathakurta, A.2    Benjamin, H.3    Kleckner, N.4
  • 3
  • 4
    • 0028276599 scopus 로고
    • Tn10 transposition in vivo: Temporal separation of cleavages at the two transposon ends and roles of terminal base pairs subsequent to interaction of ends
    • Haniford, D. and Kleckner, N. (1994) Tn10 transposition in vivo: temporal separation of cleavages at the two transposon ends and roles of terminal base pairs subsequent to interaction of ends. EMBO J., 13, 3401-3411.
    • (1994) EMBO J. , vol.13 , pp. 3401-3411
    • Haniford, D.1    Kleckner, N.2
  • 5
    • 0025964138 scopus 로고
    • Kinetic and structural analysis of a cleaved donor intermediate and a strand transfer intermediate in Tn10 transposition
    • Haniford, D.B., Benjamin, H.W. and Kleckner, N. (1991) Kinetic and structural analysis of a cleaved donor intermediate and a strand transfer intermediate in Tn10 transposition. Cell, 64, 171-179.
    • (1991) Cell , vol.64 , pp. 171-179
    • Haniford, D.B.1    Benjamin, H.W.2    Kleckner, N.3
  • 6
    • 0024446065 scopus 로고
    • Mutational analysis of IS10's outside end
    • Huisman, O., Errada, P.R., Signon, L. and Kleckner, N. (1989) Mutational analysis of IS10's outside end. EMBO J., 8, 2101-2109.
    • (1989) EMBO J. , vol.8 , pp. 2101-2109
    • Huisman, O.1    Errada, P.R.2    Signon, L.3    Kleckner, N.4
  • 7
    • 0030959067 scopus 로고    scopus 로고
    • Factors responsible for target site selection in Tn10 transposition: A role for the DDE motif in target DNA capture
    • Junop, M.S. and Haniford, D.B. (1997) Factors responsible for target site selection in Tn10 transposition: a role for the DDE motif in target DNA capture. EMBO J., 16, 2646-2655.
    • (1997) EMBO J. , vol.16 , pp. 2646-2655
    • Junop, M.S.1    Haniford, D.B.2
  • 8
  • 9
    • 0029655788 scopus 로고    scopus 로고
    • Tn10 and IS10 transposition and chromosome rearrangements: Mechanism and regulation in vivo and in vitro
    • Saedler, H. and Gierl, A. (eds). Springer-Verlag, Berlin
    • Kleckner, N., Chalmers, R.M., Kwon, D., Sakai, J. and Bolland, S. (1996) Tn10 and IS10 transposition and chromosome rearrangements: mechanism and regulation in vivo and in vitro. In Saedler, H. and Gierl, A. (eds), Current Topics in Microbiology and Immunology. Springer-Verlag, Berlin, pp. 49-82.
    • (1996) Current Topics in Microbiology and Immunology , pp. 49-82
    • Kleckner, N.1    Chalmers, R.M.2    Kwon, D.3    Sakai, J.4    Bolland, S.5
  • 10
    • 0023613953 scopus 로고
    • Rapid and efficient sitespecific mutagenesis without phenotypic selection
    • Kunkel, T.A., Roberts, J.D. Zakour, R.A. (1987) Rapid and efficient sitespecific mutagenesis without phenotypic selection. Methods Enzymol., 154, 367-382.
    • (1987) Methods Enzymol. , vol.154 , pp. 367-382
    • Kunkel, T.A.1    Roberts, J.D.2    Zakour, R.A.3
  • 12
    • 0026637325 scopus 로고
    • Transpositional recombination: Mechanistic insights from studies of Mu and other elements
    • Mizuuchi, K. (1992) Transpositional recombination: mechanistic insights from studies of Mu and other elements. Annu. Rev. Biochem., 61, 1011-1051.
    • (1992) Annu. Rev. Biochem. , vol.61 , pp. 1011-1051
    • Mizuuchi, K.1
  • 13
    • 0032509089 scopus 로고    scopus 로고
    • A quantitative UV laser footprinting analysis of the interaction of IHF with specific binding sites: Re-evaluation of the effective concentration of IHF in the cell
    • Murtin, C., Engelhorn, M., Geiselmann, J. and Boccard, F. (1998) A quantitative UV laser footprinting analysis of the interaction of IHF with specific binding sites: re-evaluation of the effective concentration of IHF in the cell. J. Mol. Biol., 284, 949-961.
    • (1998) J. Mol. Biol. , vol.284 , pp. 949-961
    • Murtin, C.1    Engelhorn, M.2    Geiselmann, J.3    Boccard, F.4
  • 14
    • 0025285536 scopus 로고
    • Bending and supercoiling of DNA at the attachment site of bacteriophage λ
    • Nash, H.A. (1990) Bending and supercoiling of DNA at the attachment site of bacteriophage λ. Trends Biochem. Sci., 15, 222-227.
    • (1990) Trends Biochem. Sci. , vol.15 , pp. 222-227
    • Nash, H.A.1
  • 15
    • 0002480960 scopus 로고    scopus 로고
    • The HU and IHF proteins: Accessory factors for complex protein-DNA assemblies
    • Lin, E.E.C. and Lynch, A.C. (eds), R.G, Landes Co., Austin, TX
    • Nash, H.A. (1996) The HU and IHF proteins: accessory factors for complex protein-DNA assemblies. In Lin, E.E.C. and Lynch, A.C. (eds), Regulation of Gene Expression in Escherichia coli, R.G, Landes Co., Austin, TX, pp. 149-179.
    • (1996) Regulation of Gene Expression in Escherichia Coli , pp. 149-179
    • Nash, H.A.1
  • 16
    • 0031052180 scopus 로고    scopus 로고
    • Making DNA do a U-turn: IHF and related proteins
    • Rice, P.A. (1997) Making DNA do a U-turn: IHF and related proteins. Curr. Opin. Struct. Biol. 7, 86-93.
    • (1997) Curr. Opin. Struct. Biol. , vol.7 , pp. 86-93
    • Rice, P.A.1
  • 17
    • 0030451819 scopus 로고    scopus 로고
    • Crystal structure of an IHF-DNA complex: A protein-induced DNA U-turn
    • Rice, P.A., Yang, S., Mizuuchi, K. and Nash, H.A. (1996) Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn. Cell, 87, 1295-1306.
    • (1996) Cell , vol.87 , pp. 1295-1306
    • Rice, P.A.1    Yang, S.2    Mizuuchi, K.3    Nash, H.A.4
  • 18
    • 0023022809 scopus 로고
    • The interaction of recombination proteins with supercoiled DNA: Defining the role of supercoiling in λ integrative recombination
    • Richet, E., Abcarian, P. and Nash, H.A. (1986) The interaction of recombination proteins with supercoiled DNA: defining the role of supercoiling in λ integrative recombination. Cell, 46, 1011-1021.
    • (1986) Cell , vol.46 , pp. 1011-1021
    • Richet, E.1    Abcarian, P.2    Nash, H.A.3
  • 20
    • 0030967281 scopus 로고    scopus 로고
    • The Tn10 synaptic complex can capture a target DNA only after transposon excision
    • Sakai, J. and Kleckner, N. (1997) The Tn10 synaptic complex can capture a target DNA only after transposon excision. Cell, 89, 205-214.
    • (1997) Cell , vol.89 , pp. 205-214
    • Sakai, J.1    Kleckner, N.2
  • 21
    • 0029143391 scopus 로고
    • Identification and characterization of a pre-cleavage synaptic complex that is an early intermediate in Tn10 transposition
    • Sakai, J., Chalmers, R.M. and Kleckner, N. (1995) Identification and characterization of a pre-cleavage synaptic complex that is an early intermediate in Tn10 transposition. EMBO J., 14, 4374-4383.
    • (1995) EMBO J. , vol.14 , pp. 4374-4383
    • Sakai, J.1    Chalmers, R.M.2    Kleckner, N.3
  • 22
    • 0032508723 scopus 로고    scopus 로고
    • Analysis of higher order intermediates and synapsis in the bent-L pathway of bacteriophage X site-specific recombination
    • Segall, A.M. (1998) Analysis of higher order intermediates and synapsis in the bent-L pathway of bacteriophage X site-specific recombination. J. Biol. Chem., 273, 24258-24265.
    • (1998) J. Biol. Chem. , vol.273 , pp. 24258-24265
    • Segall, A.M.1
  • 23
    • 0031449687 scopus 로고    scopus 로고
    • A large nucleoprotein assembly at the ends of the viral DNA mediates retroviral DNA integration
    • Wei, S.Q., Mizuuchi, K. and Craigie, R. (1997) A large nucleoprotein assembly at the ends of the viral DNA mediates retroviral DNA integration. EMBO J., 16, 7511-7520.
    • (1997) EMBO J. , vol.16 , pp. 7511-7520
    • Wei, S.Q.1    Mizuuchi, K.2    Craigie, R.3
  • 24
    • 0028446543 scopus 로고
    • Symmetry and asymmetry in the function of E.coli integration host factor: Implication for target identification by a DNA-binding protein
    • Werner, M.H., Clore, G.M., Gronenborn, A.M. and Nash, H.A. (1994) Symmetry and asymmetry in the function of E.coli integration host factor: implication for target identification by a DNA-binding protein. Curr. Biol., 4, 477-487.
    • (1994) Curr. Biol. , vol.4 , pp. 477-487
    • Werner, M.H.1    Clore, G.M.2    Gronenborn, A.M.3    Nash, H.A.4
  • 25
    • 0031573477 scopus 로고    scopus 로고
    • Site-specific recombination in plane view
    • Yang, W. and Mizuuchi, K. (1997) Site-specific recombination in plane view. Structure, 5, 1401-1406.
    • (1997) Structure , vol.5 , pp. 1401-1406
    • Yang, W.1    Mizuuchi, K.2
  • 26
    • 0024340266 scopus 로고
    • The interaction of E.coli IHF protein with its specific binding sites
    • Yang, C.C. and Nash, H.A. (1989) The interaction of E.coli IHF protein with its specific binding sites. Cell, 57, 869-880.
    • (1989) Cell , vol.57 , pp. 869-880
    • Yang, C.C.1    Nash, H.A.2
  • 27
    • 0029561532 scopus 로고
    • Comparison of protein binding to DNA in vivo and in vitro: Defining an effective intracellular target
    • Yang, S.W. and Nash, H.A. (1995) Comparison of protein binding to DNA in vivo and in vitro: defining an effective intracellular target. EMBO J., 14, 6292-6300.
    • (1995) EMBO J. , vol.14 , pp. 6292-6300
    • Yang, S.W.1    Nash, H.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.