Transient structure of the amyloid precursor protein cytoplasmic tail indicates preordering of structure for binding to cytosolic factors

Biochemistry

Volumn 39, Issue 10, 2000, Pages 2714-2725

  Ramelot, Theresa A ^a   Gentile, Lisa N ^a,b   Nicholson, Linda K ^a  

^a Department of Obstetrics Gynecology   (United States)

^b UNIVERSITY OF NEW ENGLAND   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMYLOID PRECURSOR PROTEIN; CYTOPLASM PROTEIN;

ALZHEIMER DISEASE; AMINO TERMINAL SEQUENCE; ARTICLE; HYDROGEN BOND; HYDROPHOBICITY; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PH; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN DEGRADATION; PROTEIN PROCESSING; PROTEIN STRUCTURE;

ADAPTOR PROTEINS, SIGNAL TRANSDUCING; AMINO ACID SEQUENCE; AMYLOID BETA-PROTEIN PRECURSOR; CYTOPLASM; CYTOSOL; HUMANS; HYDROGEN BONDING; HYDROGEN-ION CONCENTRATION; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NERVE TISSUE PROTEINS; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PEPTIDE FRAGMENTS; PLASMIDS; PROTEIN BINDING; PROTEIN STRUCTURE, SECONDARY; RECOMBINANT FUSION PROTEINS;

EID: 0034646447     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi992580m     Document Type: Article

References (65)

1. Selkoe, D. J., Yamazaki, T., Citron, M., Podlisny, M. B., Koo, E. H., Teplow, D. B., and Haas, C. (1996) in Annals of the New York Academy of Sciences (Wurtman, R. J., Corkin, S., Growdon, J. H., and Nitsch, R. M., Eds.) pp 57-64, New York Academy of Sciences, New York.
2. Lai, A., Sisodia, S. S., and Trowbridge, I. S. (1995) J. Biol. Chem. 270, 3565-3573.
3. Lai, A., Gibson, A., Hopkins, C. R., and Trowbridge, I. S. (1998) J. Biol. Chem. 273, 3732-3739.
4. De Strooper, B., Umans, L., Van Leuven, F., and Van Den Berghe, H. (1993) J. Cell Biol. 121, 295-304.
5. Koo, E. H., and Squazzo, S. L. (1994) J. Biol. Chem. 269, 17386-17389.
6. Kornfeld, S., and Mellman, I. (1989) Annu. Rev. Cell Biol. 5, 483-525.
7. Fukuda, M. (1991) J. Biol. Chem. 266, 21327-21330.
8. Haass, C., Koo, E. H., Capell, A., Teplow, D. B., and Selkoe, D. J. (1995) J. Cell Biol. 128, 537-547.
9. Kang, J., Lemaire, H.-G., Unterbeck, A., Salbaum, J. M., Masters, C. L., Grzeschik, K.-H., Multhaup, G., Beyreuther, K., and Muller-Hill, B. (1987) Nature 325, 733-736.
10. Yamatsuji, T., Okamoto, T., Takeda, S., Murayama, Y., Tanaka, N., and Nishimoto, I. (1996) EMBO J. 15, 498-509.
11. Nishimoto, I., Okamoto, T., Matsuura, Y., Takahashi, S., Okamoto, T., Murayama, Y., and Ogata, E. (1993) Nature 362, 75-79.
12. Okamoto, T., Takeda, S., Murayama, Y., Ogata, E., and Nishimoto, I. (1995) J. Biol. Chem. 270, 4205-4208.
13. Yamatsuji, T., Matsui, T., Okamoto, T., Komatsuzaki, K., Takeda, S., Fukumoto, H., Iwatsubo, T., Suzuki, N., Asami-Odaka, A., Ireland, S., Kinane, T. B., Giambarella, U., and Nishimoto, I. (1996) Science 272, 1349-1352.
14. Chow, N., Korenberg, J. R., Chen, X.-N., and Neve, R. L. (1996) J. Biol. Chem. 271, 11339-11346.
15. Borg, J.-P., Ooi, J., Levy, E., and Margolis, B. (1996) Mol. Cell. Biol. 16, 6229-6241.
16. Zambrano, N., Buxbaum, J. D., Minopoli, G., Fiore, F., De Candia, P., De Renzis. S., Faraonio, R., Sabo, S., Cheetham, J., Sudol, M., and Russo, T. (1997) J. Biol. Chem. 272, 6399-6405.
17. Guenette, S. Y., Chen, J., Paul, J. D., and Tanzi, R. E. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 10832-10837.
18. Zhang, Z., Lee, C.-H., Mandiyan, V., Borg, J.-P., Margolis, B., Schelssinger, J., and Kuriyan, J. (1997) EMBO J. 16, 6141-6150.
19. Kroenke, C. D., Ziemnicka-Kotula, D., Xu, J., and Palmer, A. G. (1997) Biochemistry 36, 8145-8152.
20. Goldgaber, D., Lerman, M. I., McBride, O. W., Saffiotti, U., and Gajdusek, D. C. (1987) Science 235, 877-880.
21. Robakis, N. K., Ramakrishna, N., Wolfe, G., and Misniewski, H. M. (1987) Proc. Natl. Acad. Sci. U.S.A. 84, 4190-4194.
22. States, D. J., Haberkorn, R. A., and Ruben, D. J. (1982) J. Magn. Reson. 48, 286-292.
23. Bax, A., and Davis, D. G. (1985) J. Magn. Reson. 65, 355-360.
24. Bodenhausen, G., Kogler, H., and Ernst, R. R. (1984) J. Magn. Reson. 58, 370-388.
25. Shaka, A. J., Lee, C. J., and Pines, A. (1988) J. Magn. Reson. 274-293.
26. Kay, L. E., and Bax, A. (1990) J. Magn. Reson. 86, 100-126.
27. Vuister, G. W., and Bax, A. (1993) J. Am. Chem. Soc. 115, 7772-7777.
28. Skelton, N. J., Kordel, J., Akke, M., and Chazin, W. J. (1992) J. Mol. Biol. 227, 1100-17.
29. Bai, Y., Milne, J. S., Mayne, L., and Englander, S. W. (1993) Proteins: Struct., Funct., Genet. 17, 75.
30. Connelly, G. P., Bai, Y., Mei-Fen, J., and Englander, S. W. (1993) Proteins: Struct., Funct., Genet. 17, 87-92.
31. Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) J. Biomol. NMR 6, 277-93.
32. Garrett, D. S., Powers, R., Gronenborn, A. M., and Clore, G. M. (1991) J. Magn. Reson. 95, 214-220.
33. Nilges, M., Clore, G. M., and Gronenborn, A. M. (1988) FEBS Lett. 229, 317-324.
34. Brünger, A. T. (1992) X-PLOR, Version 3.1: A System for X-ray Crystallography and NMR. Harvard University Press, New Haven, CT.
35. Wishart, D. S., Sykes, B. D., and Richards, F. M. (1992) Biochemistry 31, 1647-1651.
36. Dyson, J. H., Rance, M., Houghten, R. A., Wright, P. E., and Lerner, R. (1988) J. Mol. Biol. 201, 201-217.
37. Seale, J. W., Srinivasan, R., and Rose, G. D. (1994) Protein Sci. 3, 1741-1745.
38. Stickle, D. F., Presta, L. G., Dill, K. A., and Rose, G. D. (1992) J. Mol. Biol. 226, 1143-1159.
39. Aurora, R., and Rose, G. D. (1998) Protein Sci. 7, 21-38.
40. Harper, E. T., and Rose, G. D. (1993) Biochemistry 32, 7605-9.
41. Kyte, J., and Doolittle, R. F. (1982) J. Mol. Biol. 157, 105.
42. Bundi, A., and Wüthrich, K. (1979) Biopolymers 18, 299-311.
43. Szyperski, T., Antuch, W., Schick, M., Betz., A., Stone, S. R., and Wüthrich, K. (1994) Biochemistry 33, 9303-9310.
44. Schaller, W., and Robertson, A. D. (1995) Biochemists 34, 4714-4723.
45. Khoda, D., and Inagaki, F. (1992) Biochemists 31, 11928-11939.
46. Doig, A., Macarthur, M. W., Stapley, B. J., and Thornton, J. M. (1997) Protein Sci. 6, 147-155.
47. Clore, G. M., Nilges, M., Sukumaran, D. K., Brünger, A. T., Karplus, M., and Gronenborn, A. M. (1986) EMBO J. 5, 2729-2735.
48. Lawson, C. L., Zhang, R. G., Schevitz, R. W., Otwinowski, Z., Joachimiak, A., and Sigler, P. B. (1988) Proteins: Struct., Funct., Genet. 3, 18-31.
49. Watanabe, T., Sukegawa, J., Sukegawa, I., Tomita, S., Iijima, K., Oguchi, S., Suzuki, T., Nairn, A. C., and Greengard, P. (1999) J. Neurochem. 72, 549-556.
50. Borg, J. P., Yang, Y., De Taddeo-Borg, M., Margolis, B., and Turner, R. S. (1998) J. Biol. Chem. 273, 14761-14766.
51. Lehmann, L. E., Eberle, W., Krull, S., Prill, V., Schmidt, B., Sander, C., von Figura, K., and Peters, C. (1992) EMBO J. 11, 4391-4399.
52. Chen, W.-J., Goldstein, J. L., and Brown, M. S. (1990) J. Biol. Chem. 265, 3116-3123.
53. Bansal, A., and Gierasch, L. M. (1991) Cell 67, 1195-1201.
54. Giambarella, U., Yamatsuji, T., Okamoto, T., Matsui, T., Ikezu, T., Murayama, Y., Levine, M. A., Katz, A., Gautam, N., and Nishimoto, I. (1997) EMBO J. 16, 4897-4907.
55. Lang, J., Nishimoto, I., Okamoto, T., Sadoul, K., Regazzi, R., Kiraly, K., Willer, U., and Wollheim, C. B. (1995) EMBO J. 14, 3635-3644.
56. Dobson, C. M., and Karplus, M. (1999) Curr. Opin. Struct. Biol. 9, 92-101.
57. Wright, P. E., Dyson, H. J., and Lerner, R. A. (1988) Biochemistry 27, 7167-7175.
58. Hubbard, J. A., MacLachlan, L. K., Meenan, E., Salter, C. J., Reid, D. G., Lahouratate, P., Humphries, J., Stevens, N., Bell, D., Neville, W. A., Murray, K., and Darker, J. G. (1994) Mol. Membr. Biol. 11, 263-269.
59. Sandoval, I. V., Arredondo, J. J., Alcalde, J., Gonzalez Noriega, A., Vandekerckhove, J., Jimenez, M. A., and Rico, M. (1994) J. Biol. Chem. 269, 6622-6631.
60. Wilde, A., Dempsey, C., and Banting, G. (1994) J. Biol. Chem. 10, 7131-7136.
61. Wray, V., Mertins, D., Kiess, M., Henklein, P., Trowitzsch-Kienast, W., and Schubert, U. (1998) Biochemistry 37, 8527-8538.
62. Serrano, L., Sancho, J., Hirshberg, M., and Fersht, A. R. (1992) J. Mol. Biol. 227, 544-559.
63. Radford, S. E., Dobson, C. M., and Evans, P. A. (1992) Nature 358, 302-307.
64. Dyson, H. J., Rance, M., Houghten, R. A., Lerner, R. A., and Wright. P. E. (1988) J. Mol. Biol. 201, 161-200.
65. Ernst, R. R., Bodenhausen, G., and Wokaun, A. (1997) Principles of Nuclear Magnetic Resonance in One and Two Dimensions, Clarendon Press, Oxford, England.