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Volumn 271, Issue 2, 2000, Pages 363-370

Internal and 3' RNA initiation by Qβ replicase directed by CCA boxes

Author keywords

3' adenylation; Initiation of RNA synthesis; Positive strand RNA virus; Q bacteriophage; RNA dependent RNA polymerase; Transcription

Indexed keywords

PURINE; PYRIMIDINE; RNA DIRECTED RNA POLYMERASE; VIRUS RNA;

EID: 0034608198     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.2000.0334     Document Type: Article
Times cited : (12)

References (24)
  • 1
    • 0029866750 scopus 로고    scopus 로고
    • Cis-acting elements within an RNA coliphage genome: Fold as you please, but fold you must!!
    • Arora R., Priano C., Jacobson A. B., Mills D. R. cis-acting elements within an RNA coliphage genome: Fold as you please, but fold you must!! J. Mol. Biol. 258:1996;433-446.
    • (1996) J. Mol. Biol. , vol.258 , pp. 433-446
    • Arora, R.1    Priano, C.2    Jacobson, A.B.3    Mills, D.R.4
  • 2
    • 0027282394 scopus 로고
    • Different mechanisms of recognition of bacteriophage Qβ plus and minus strand RNAs by Qβ replicase
    • Barrera I., Schuppli D., Sogo J. M., Weber H. Different mechanisms of recognition of bacteriophage Qβ plus and minus strand RNAs by Qβ replicase. J. Mol. Biol. 232:1993;512-521.
    • (1993) J. Mol. Biol. , vol.232 , pp. 512-521
    • Barrera, I.1    Schuppli, D.2    Sogo, J.M.3    Weber, H.4
  • 4
    • 0018370008 scopus 로고
    • RNA replication: Function and structure of Qβ-replicase
    • Blumenthal T., Carmichael G. G. RNA replication: function and structure of Qβ-replicase. Annu. Rev. Biochem. 48:1979;525-548.
    • (1979) Annu. Rev. Biochem. , vol.48 , pp. 525-548
    • Blumenthal, T.1    Carmichael, G.G.2
  • 5
    • 0028808340 scopus 로고
    • Selection and characterization of RNAs replicated by Qβ replicase
    • Brown D., Gold L. Selection and characterization of RNAs replicated by Qβ replicase. Biochemistry. 34:1995;14775-14782.
    • (1995) Biochemistry , vol.34 , pp. 14775-14782
    • Brown, D.1    Gold, L.2
  • 6
    • 0029859576 scopus 로고    scopus 로고
    • RNA replication by Qβ replicase: A working model
    • Brown D., Gold L. RNA replication by Qβ replicase: A working model. Proc. Natl. Acad. Sci. USA. 93:1996;11558-11562.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 11558-11562
    • Brown, D.1    Gold, L.2
  • 7
    • 0033605077 scopus 로고    scopus 로고
    • A minimal RNA promoter for minus-strand RNA synthesis by the brome mosaic virus polymerase complex
    • Chapman M. R., Kao C. C. A minimal RNA promoter for minus-strand RNA synthesis by the brome mosaic virus polymerase complex. J. Mol. Biol. 286:1999;709-720.
    • (1999) J. Mol. Biol. , vol.286 , pp. 709-720
    • Chapman, M.R.1    Kao, C.C.2
  • 8
    • 0031969648 scopus 로고    scopus 로고
    • Minimal template requirements for initiation of minus-strand synthesis in vitro by the RNA-dependent RNA polymerase of turnip yellow mosaic virus
    • Deiman B. A., Koenen A. K., Verlaan P. W., Pleij C. W. Minimal template requirements for initiation of minus-strand synthesis in vitro by the RNA-dependent RNA polymerase of turnip yellow mosaic virus. J. Virol. 72:1998;3965-3972.
    • (1998) J. Virol. , vol.72 , pp. 3965-3972
    • Deiman, B.A.1    Koenen, A.K.2    Verlaan, P.W.3    Pleij, C.W.4
  • 9
    • 0016839447 scopus 로고
    • Initiation specificity of the poly(cytidylic acid)-dependent Qβ replicase activity
    • Feix G., Sano H. Initiation specificity of the poly(cytidylic acid)-dependent Qβ replicase activity. Eur. J. Biochem. 58:1975;59-64.
    • (1975) Eur. J. Biochem. , vol.58 , pp. 59-64
    • Feix, G.1    Sano, H.2
  • 10
    • 0015520441 scopus 로고
    • A new method for the purification of Qβ RNA-dependent RNA polymerase
    • Kamen R. A new method for the purification of Qβ RNA-dependent RNA polymerase. Biochim. Biophys. Acta. 262:1972;88-100.
    • (1972) Biochim. Biophys. Acta , vol.262 , pp. 88-100
    • Kamen, R.1
  • 11
    • 0016696712 scopus 로고
    • Minimal requirements for template recognition by bacteriophage Qβ replicase: Approach to general RNA-dependent RNA synthesis
    • Kuppers B., Sumper M. Minimal requirements for template recognition by bacteriophage Qβ replicase: Approach to general RNA-dependent RNA synthesis. Proc. Natl. Acad. Sci. USA. 72:1975;2640-2643.
    • (1975) Proc. Natl. Acad. Sci. USA , vol.72 , pp. 2640-2643
    • Kuppers, B.1    Sumper, M.2
  • 12
    • 0032876683 scopus 로고    scopus 로고
    • Crystal structure of the RNA-dependent RNA polymerase from hepatitis C virus reveals a fully encircled active site
    • Lesburg C. A., Cable M. B., Ferrari E., Hong Z., Mannarino A. F., Weber P. C. Crystal structure of the RNA-dependent RNA polymerase from hepatitis C virus reveals a fully encircled active site. Nat. Struct. Biol. 6:1999;937-943.
    • (1999) Nat. Struct. Biol. , vol.6 , pp. 937-943
    • Lesburg, C.A.1    Cable, M.B.2    Ferrari, E.3    Hong, Z.4    Mannarino, A.F.5    Weber, P.C.6
  • 13
    • 0021933941 scopus 로고
    • Synthesis of brome mosaic virus subgenomic RNA in vitro by internal initiation on (-)-sense genomic RNA
    • Miller W. A., Dreher T. W., Hall T. C. Synthesis of brome mosaic virus subgenomic RNA in vitro by internal initiation on (-)-sense genomic RNA. Nature. 313:1985;68-70.
    • (1985) Nature , vol.313 , pp. 68-70
    • Miller, W.A.1    Dreher, T.W.2    Hall, T.C.3
  • 14
    • 0023651444 scopus 로고
    • Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates
    • Milligan J. F., Groebe D. R., Witherell G. W., Uhlenbeck O. C. Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucleic Acids Res. 15:1987;8783-8798.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 8783-8798
    • Milligan, J.F.1    Groebe, D.R.2    Witherell, G.W.3    Uhlenbeck, O.C.4
  • 16
    • 0031686310 scopus 로고    scopus 로고
    • T7 RNA polymerase produces 5′ end heterogeneity during in vitro transcription from certain templates
    • Pleiss J. A., Derrick M. L., Uhlenbeck O. C. T7 RNA polymerase produces 5′ end heterogeneity during in vitro transcription from certain templates. RNA. 4:1998;1313-1317.
    • (1998) RNA , vol.4 , pp. 1313-1317
    • Pleiss, J.A.1    Derrick, M.L.2    Uhlenbeck, O.C.3
  • 17
    • 0031592948 scopus 로고    scopus 로고
    • Probing RNA-protein interactions using pyrene-labeled oligodeoxynucleotides: Qβ replicase efficiently binds small RNAs by recognizing pyrimidine residues
    • Preuss R., Dapprich J., Walter N. G. Probing RNA-protein interactions using pyrene-labeled oligodeoxynucleotides: Qβ replicase efficiently binds small RNAs by recognizing pyrimidine residues. J. Mol. Biol. 273:1997;600-613.
    • (1997) J. Mol. Biol. , vol.273 , pp. 600-613
    • Preuss, R.1    Dapprich, J.2    Walter, N.G.3
  • 18
    • 0032582475 scopus 로고    scopus 로고
    • A branched stem-loop structure in the M-site of bacteriophage Qβ RNA is important for template recognition by Qβ replicase holoenzyme
    • Schuppli D., Miranda G., Qiu S., Weber H. A branched stem-loop structure in the M-site of bacteriophage Qβ RNA is important for template recognition by Qβ replicase holoenzyme. J. Mol. Biol. 283:1998;585-593.
    • (1998) J. Mol. Biol. , vol.283 , pp. 585-593
    • Schuppli, D.1    Miranda, G.2    Qiu, S.3    Weber, H.4
  • 19
    • 0030761264 scopus 로고    scopus 로고
    • Sequence-specific recognition of a subgenomic RNA promoter by a viral RNA polymerase
    • Siegel R. W., Adkins S., Kao C. C. Sequence-specific recognition of a subgenomic RNA promoter by a viral RNA polymerase. Proc. Natl. Acad. Sci. USA. 94:1997;11238-11243.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 11238-11243
    • Siegel, R.W.1    Adkins, S.2    Kao, C.C.3
  • 20
    • 0031664772 scopus 로고    scopus 로고
    • Specific site selection in RNA resulting from a combination of nonspecific secondary structure and -CCR- boxes: Initiation of minus strand synthesis by turnip yellow mosaic virus RNA-dependent RNA polymerase
    • Singh R. N., Dreher T. W. Specific site selection in RNA resulting from a combination of nonspecific secondary structure and -CCR- boxes: Initiation of minus strand synthesis by turnip yellow mosaic virus RNA-dependent RNA polymerase. RNA. 4:1998;1083-1095.
    • (1998) RNA , vol.4 , pp. 1083-1095
    • Singh, R.N.1    Dreher, T.W.2
  • 21
    • 0030024985 scopus 로고    scopus 로고
    • Overstretching B-DNA: The elastic response of individual double-stranded and single-stranded DNA molecules
    • Smith S. B., Cui Y., Bustamante C. Overstretching B-DNA: The elastic response of individual double-stranded and single-stranded DNA molecules. Science. 271:1996;795-799.
    • (1996) Science , vol.271 , pp. 795-799
    • Smith, S.B.1    Cui, Y.2    Bustamante, C.3
  • 22
    • 0026770023 scopus 로고
    • Structural consensus of RNA templates replicated by Qβ replicase
    • Voronin L. A. Structural consensus of RNA templates replicated by Qβ replicase. Biochimie (Paris). 74:1992;491-494.
    • (1992) Biochimie (Paris) , vol.74 , pp. 491-494
    • Voronin, L.A.1
  • 23
    • 0034113957 scopus 로고    scopus 로고
    • CCA initiation boxes without unique promoter elements support in vitro transcription by three RNA viral RNA polymerases
    • Yoshinari S., Nagy P. D., Simon A. E., Dreher T. W. CCA initiation boxes without unique promoter elements support in vitro transcription by three RNA viral RNA polymerases. RNA. 2000.
    • (2000) RNA
    • Yoshinari, S.1    Nagy, P.D.2    Simon, A.E.3    Dreher, T.W.4
  • 24
    • 0028943179 scopus 로고
    • Design of artificial short-chained RNA species that are replicated by Qβ replicase
    • Zamora H., Luce R., Biebricher C. K. Design of artificial short-chained RNA species that are replicated by Qβ replicase. Biochemistry. 34:1995;1261-1266.
    • (1995) Biochemistry , vol.34 , pp. 1261-1266
    • Zamora, H.1    Luce, R.2    Biebricher, C.K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.