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Volumn 146, Issue 2, 2000, Pages 249-254

Sources of and Solutions to Problems in the Refinement of Protein NMR Structures against Torsion Angle Potentials of Mean Force

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

EID: 0034296491     PISSN: 10907807     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmre.2000.2142     Document Type: Article
Times cited : (95)

References (11)
  • 1
    • 0032568556 scopus 로고    scopus 로고
    • New methods of structure refinement for macromolecular structure detemination by NMR
    • G. M. Clore and A. M. Gronenborn, New methods of structure refinement for macromolecular structure detemination by NMR, Proc. Natl. Acad. Sci. U.S.A. 95, 5891-5898 (1998).
    • (1998) Proc. Natl. Acad. Sci. U.S.A. , vol.95 , pp. 5891-5898
    • Clore, G.M.1    Gronenborn, A.M.2
  • 2
    • 0030000912 scopus 로고    scopus 로고
    • Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases
    • J. Kuszewski, A. M. Gronenborn, and G. M. Clore, Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases, Prot. Sci. 5, 1067-1080 (1996).
    • (1996) Prot. Sci. , vol.5 , pp. 1067-1080
    • Kuszewski, J.1    Gronenborn, A.M.2    Clore, G.M.3
  • 3
    • 0031083293 scopus 로고    scopus 로고
    • Improvements and extensions in the conformational database potential for the refinement of NMR and X-ray structures of proteins and nucleic acids
    • J. Kuszewski, A. M. Gronenborn, and G. M. Clore, Improvements and extensions in the conformational database potential for the refinement of NMR and X-ray structures of proteins and nucleic acids, J. Magn. Reson. 125, 171-177 (1997).
    • (1997) J. Magn. Reson. , vol.125 , pp. 171-177
    • Kuszewski, J.1    Gronenborn, A.M.2    Clore, G.M.3
  • 4
    • 0025341310 scopus 로고
    • Calculation of conformation ensembles from potentials of mean force: An approach to the knowledge-based prediction of local structures in globular proteins
    • M. J. Sippl, Calculation of conformation ensembles from potentials of mean force: An approach to the knowledge-based prediction of local structures in globular proteins, J. Mol. Biol. 213, 859-883 (1990).
    • (1990) J. Mol. Biol. , vol.213 , pp. 859-883
    • Sippl, M.J.1
  • 6
    • 0024285896 scopus 로고
    • Determination of three-dimensional structures of proteins from interproton distance data by hybrid distance geometry-dynamical simulated annealing calculations
    • M. Nilges, G. M. Clore, and A. M. Gronenborn, Determination of three-dimensional structures of proteins from interproton distance data by hybrid distance geometry-dynamical simulated annealing calculations, FEBS Lett. 229, 317-324 (1988).
    • (1988) FEBS Lett. , vol.229 , pp. 317-324
    • Nilges, M.1    Clore, G.M.2    Gronenborn, A.M.3
  • 8
    • 0033577269 scopus 로고    scopus 로고
    • Improving the packing and accuracy of NMR structures with a pseudopotential for the radius of gyration
    • J. Kuszewski, A. M. Gronenborn, and G. M. Clore, Improving the packing and accuracy of NMR structures with a pseudopotential for the radius of gyration, J. Am. Chem. Soc. 121, 2337-2338 (1999).
    • (1999) J. Am. Chem. Soc. , vol.121 , pp. 2337-2338
    • Kuszewski, J.1    Gronenborn, A.M.2    Clore, G.M.3
  • 9
    • 0000243829 scopus 로고
    • PROCHECK: A program to check the stereochemical quality of protein structures
    • R. A. Laskowski, M. W. MacArthur, D. S. Moss, and J. M. Thornton, PROCHECK: A program to check the stereochemical quality of protein structures, J. Appl. Cryst. 26, 283-291 (1993).
    • (1993) J. Appl. Cryst. , vol.26 , pp. 283-291
    • Laskowski, R.A.1    MacArthur, M.W.2    Moss, D.S.3    Thornton, J.M.4
  • 10
    • 0034213458 scopus 로고    scopus 로고
    • Solution structure of the MEF2A-DNA complex: Structural basis for the modulation of DNA bending and specificity by MADS-box transcription factors
    • K. Huang, J. M. Louis, L. Donaldson, F.-L. Lim, A. D. Sharrocks, and G. M. Clore, Solution structure of the MEF2A-DNA complex: Structural basis for the modulation of DNA bending and specificity by MADS-box transcription factors, EMBO J. 19, 2615-2628 (2000).
    • (2000) EMBO J. , vol.19 , pp. 2615-2628
    • Huang, K.1    Louis, J.M.2    Donaldson, L.3    Lim, F.-L.4    Sharrocks, A.D.5    Clore, G.M.6
  • 11
    • 0344258272 scopus 로고    scopus 로고
    • Impact of residual dipolar couplings on the accuracy of NMR structures determined from a minimal number of NOE restraints
    • G. M. Clore, M. R. Starich, C. A. Bewley, M. Cai, and J. Kuszewski, Impact of residual dipolar couplings on the accuracy of NMR structures determined from a minimal number of NOE restraints, J. Am. Chem. Soc. 121, 6513-6514 (1999).
    • (1999) J. Am. Chem. Soc. , vol.121 , pp. 6513-6514
    • Clore, G.M.1    Starich, M.R.2    Bewley, C.A.3    Cai, M.4    Kuszewski, J.5


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