Alanine mutagenesis of high-mobility-group-protein-1 box B (HMG1-B)

Biochemical Journal

Volumn 347, Issue 3, 2000, Pages 807-814

  Taudte, Susann ^a   Xin, Hong ^a   Kallenbach, Neville R ^a  

^a NEW YORK UNIVERSITY   (United States)

Author keywords

Alanine scan; Four way junction; Protein stability; Protein DNA interaction; Structure specific recognition

Indexed keywords

ALANINE; DNA; GUANIDINE; HIGH MOBILITY GROUP PROTEIN; PHENYLALANINE;

AMINO ACID SUBSTITUTION; ARTICLE; CONTROLLED STUDY; MOLECULAR MODEL; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN DOMAIN; PROTEIN FOLDING; RAT; SITE DIRECTED MUTAGENESIS;

ALANINE; AMINO ACID MOTIFS; AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ANIMALS; CARRIER PROTEINS; CIRCULAR DICHROISM; DNA; DNA-BINDING PROTEINS; FLUORESCENCE; GUANIDINE; HIGH MOBILITY GROUP PROTEINS; HMGB1 PROTEIN; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUTATION; PHENYLALANINE; PROTEIN BINDING; PROTEIN DENATURATION; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; RATS; TEMPERATURE; THERMODYNAMICS; TRYPTOPHAN;

EID: 0034192308     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/0264-6021:3470807     Document Type: Article

References (37)

1. 1 Bustin, M. and Reeves, R. (1996) Progr. Nucleic Acid Res. Mol. Biol. 54, 35-100
2. 2 Pazin, M. J. and Kadonaga, J. T. (1997) Cell 89, 325-328
3. 3 Widom, J. (1998) Curr. Biol. 8, R788-R791
4. 4 Struhl, K. (1998) Genes Dev. 12, 599-606
5. 5 Johnson, C. A., Goddard, J. P. and Adams, R. L. P. (1995) Biochem. J. 305, 791-798
6. 6 Sera, T. and Wolffe, A. P. (1998) Mol. Cell. Biol. 18, 3668-3680
7. 7 Jantzen, H., Admon, A., Bell, S. and Tjian, R. (1990) Nature (London) 344, 830-836
8. 8 Ner, S. S. (1992) Curr. Biol. 2, 208-210
9. 9 Teo, S.-H., Grasser, K. D. and Thomas, J. O. (1995) Eur. J. Biochem. 230, 943-950
10. 10 Pil, P. M., Chow, C. S. and Lippard, S. J. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 9465-9469
11. 11 Blanchi, M. E., Beltrame, M. and Paonessa, G. (1989) Science 24, 1056-1059
12. 12 Bianchi, M. E., Falciola, L., Ferrari, S. and Lilley, D M. J. (1992) EMBO J. 11, 1055-1063
13. 13 Paull, T. T., Haykinson, M. J. and Johnson, R. C (1993) Genes Dev. 7, 1521-1534
14. 14 Grosschedl, R., Giese, K. and Pagel, J. (1994) Trends Genet 10, 94-100
15. 15 Wang, H., Bloom, O., Zhang, M., Vishnubhakat, J. M., Ombrellino, M., Che, J., Frazier, A., Yang, H., Ivanova, S., Borovikova, L. et al. (1999) Science 285, 248-251
16. 16 Weir, H. M., Kraulis, P. J., Hill, C. S., Raine, A. R. C., Laue, E. D. and Thomas, J. O. (1993) EMBO J. 12, 1311-1319
17. 17 Hardman, C. H., Broadhurst, R. W., Raine, A. R. C., Grasser, K. D., Thomas, J. O. and Laue, E. D. (1995) Biochemistry 34, 16596-16607
18. 18 Love, J. J., Li, X., Case, D. A., Giese, K., Grosschedl, R. and Wright, P. E. (1995) Nature (London) 376, 791-795
19. 19 Werner, M. H., Huth, J. R., Gronenborn, A. M. and Clore, G. M. (1995) Cell 81, 705-714
20. 20 Werner, M. H., Gronenborn, A. M. and Clore, G. M. (1996) Science 271, 778-784
21. 21 Zlatanova, J. and van Holde, K. (1998) FASEB J. 12, 421-431
22. 22 Allain, F. H.-T., Yen, Y.-M., Masse, J. E., Schultze, P., Diekmann, T., Johnson, R. C. and Feigon, J. (1999) EMBO J. 18, 2563-2579
23. 23 Milla, M. E., Brown, B. M. and Sauer, R. T. (1994) Nat. Struct. Biol. 1, 518-523
24. 24 Brown, B. M., Milla, M. E., Smith, T. L. and Sauer, R. T. (1994) Nature Struct. Biol. 1, 164-168
25. 25 Brown, B. M. and Sauer, R. T. (1999) Proc Natl. Acad. Sci. U.S.A. 96, 1983-1988
26. 26 Bianchi, M. E. (1991) Gene 104, 271-275
27. 27 Kunkel, T. A., Bebenek, K. and McClary, J. (1991) Methods Enzymol. 204, 125-139
28. 28 Chow, C. S., Barnes, C. M. and Lippard, S. J. (1995) Biochemistry 34, 2956-2964
29. 29 Pace, C. N., Vajdos, F., Fee, L., Grimsley, G. and Gray, T. (1995) Protein Sci. 4, 2411-2423
30. 30 Kallenbach, N. R., Ma, R. I. and Seeman, N. C. (1983) Nature (London) 305, 829-831
31. 31 Pace, C. N. (1988) Methods Enzymol. 131, 266-279
32. 32 Milardi, D., la Rosa, C., Fasone, S. and Grasso, D. (1997) Biophys. Chem. 69, 43-51
33. 33 Bianchi, M. E. (1988) EMBO J. 7, 843-849
34. 34 Falciola, L., Murchie, A. I. H., Lilley, D. M. and Bianchi, M. E. (1994) Nucleic Acids Res. 22, 285-292
35. 35 Weiss, M. A., Ukiyama, E. and King, C.-Y. (1997) J. Biomol. Struct. Dyn. 15, 177-184
36. 36 Bednar, J., Horowitz, R. A., Grigoryev, S. A., Carruthers, L. M., Hansen, J. C., Koster, A. J. and Woodcock, C. L. (1998) Proc. Natl. Acad. Sci. U.S.A 95, 14173-14178
37. 37 Ferrari, S., Harley, V. R., Pontiggia, A., Goodfellow, P. N., Lovell-Badge, R. and Bianchi, M. E. (1992) EMBO J. 11, 4497-4506