Integration of the genetic and physical maps of the chicken macrochromosomes

Animal Genetics

Volumn 31, Issue 1, 2000, Pages 20-27

  Smith, J ^a   Paton, I R ^a   Bruley, C K ^a   Windsor, D ^a   Burke, D ^b   Ponce De Leon, F A ^b   Burt, D W ^a  

^a UNIVERSITY OF EDINBURGH   (United Kingdom)

^b UNIVERSITY OF MINNESOTA   (United States)

Author keywords

Chicken; Genetic map; Group; Integration; Linkage; Macrochromosomes; Physical map

Indexed keywords

CHICKEN; CHROMOSOMAL LOCALIZATION; CLONE; GENETIC DISTANCE; LINKAGE GROUP; MACROCHROMOSOME; SEX CHROMOSOME;

ANIMALS; CHICKENS; COSMIDS; IN SITU HYBRIDIZATION, FLUORESCENCE; LINKAGE (GENETICS); PHYSICAL CHROMOSOME MAPPING; POLYMORPHISM, SINGLE-STRANDED CONFORMATIONAL;

AVES; GALLUS GALLUS;

EID: 0034141856     PISSN: 02689146     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2052.2000.00549.x     Document Type: Article

References (39)

1. Beier D.R. (1993) Single-strand conformation polymorphism (SSCP) analysis as a tool for genetic mapping. Mammalian Genome 4, 627-31.
2. Budowle B., Chakraborty R., Giusti A.M., Eisenberg A.J. & Allen R.C. (1991) Analysis of the VNTR locus DIS80 by the PCR followed by high-resolution PAGE. American Journal of Human Genetics 48, 137-44.
3. Buitkamp J., Ewald D., Schalkwyk L. et al. (1998) Construction and characterization of a gridded chicken cosmid library with four-fold genomic coverage. Animal Genetics 29, 295-301.
4. Bumstead N. & Palyga J. (1992) A preliminary linkage map of the chicken genome. Genomics 13, 690-7.
5. Burke D., Burt D.W. & Ponce de Leon F.A. (1994) Chromosomal assignment of the chicken transforming growth factor β3 gene by FISH. In: 11th European Colloquium on Cytogenetics of Domestic Animals, Denmark, August 2-5.
6. Burt D.W. (1994) Mapping the chicken GAPD locus using heteroduplex polymorphisms. Animal Genetics 25, 207.
7. Burt D.W. & Cheng H.H. (1998) Bird gene maps. ILAR Journal 39, 229-36.
8. Burt D.W., Dey B.R., Paton I.R., Morrice D.R. & Law A.S. (1995) the chicken transforming growth factor β3 gene: genomic structure, transcriptional analysis and chromosomal location. DNA and Cell Biology 14, 111-23.
9. Cheng H.H. & Crittenden L.B. (1994) Microsatellite markers for genetic mapping in the chicken. Poultry Science 73, 539-46.
10. Cheng H.H., Levin I., Vallejo R.L. et al. (1995) Development of a genetic map of the chicken with markers of high utility. Poultry Science 74, 1855-74.
11. Crittenden L.B., Provencher L., Santangelo L. et al. (1993) Characterization of a Red Jungle Fowl by White Leghorn backcross reference population for molecular mapping of the chicken genome. Poultry Science 72, 334-48.
12. Dominguez-Steglich M., Jeltsch J.-M. & Schmid M. (1992) In situ mapping of the chicken progesterone receptor gene and the ovalbumin gene. Genomics 13, 1343-4.
13. Fillon V., Langlois P., Douaire M., Gellin J. & Vignal A. (1997) Assignment of stearoyl coenzyme A desaturase gene (SCD1) to chicken chromosome R-band 6q14 by in situ hybridization. Cytogenetics and Cell Genetics 78, 229-30.
14. Fillon V., Morisson M., Zoorob R. et al. (1998) Identification of 16 chicken microchromosomes by molecular markers using two-colour Fluorescence In situ Hybridization (FISH). Chromosome Research 6, 307-13.
15. Fridolfsson A.-K., Cheng H.H., Copeland N.G. et al. (1998) Evolution of the avian sex chromosomes from an ancestral pair of autosomes. Proceedings of the National Academy of Sciences USA 95, 8147-52.
16. Girard-Santosuosso O., Bumstead N., Lantier I. et al. (1997) Partial conservation of the mammalian NRAMP1 syntenic group on chicken chromosome 7. Mammalian Genome 8, 614-6.
17. Griffiths R. & Korn R.M. (1997) A CHD1 gene is Z chromosome linked in the chicken Gallus domesticus. Gene 197, 229.
18. Groenen M.A.M., Crooijmans R.P.M.A., Veenendal A., Cheng H.H., Siwek M. & van der Poel J.J. (1998) A comprehensive microsatellite linkage map of the chicken genome. Genomics 49, 265-74.
19. Hu J., Bumstead N., Burke D. et al. (1995) Genetic and physical mapping of the natural resistance-associated macrophage protein 1 (NRAMP1) in chicken. Mammalian Genome 6, 809-15.
20. Jones C.T., Morrice D.R., Paton I.R. & Burt D.W. (1997) Gene homologs on human chromosome 15q21-q26 and a chicken microchromosome identify a new conserved segment. Mammalian Genome 8, 436-40.
21. Klein S., Morrice D.R., Sang H., Crittenden L.B. & Burt D.W. (1996) Genetic and physical mapping of the chicken IGF1 gene to chromosome 1 and conservation of synteny with other vertebrate genomes. Journal of Heredity 87, 10-4.
22. Kosambi D.D. (1944) The estimation of the map distance from recombination values. Ann. Eugenics 12, 172-5.
23. Levin I., Santangelo L., Cheng H.H., Crittenden L.B. & Dodgson J. (1994) An autosomal genetic linkage map of the chicken. Journal of Heredity 85, 79-85.
24. Manly K.F. (1993) A Macintosh program for storage and analysis of experimental genetic mapping data. Mammalian Genome 4, 303-13.
25. Morisson M., Pitel F., Fillon V. et al. (1998) Integration of chicken cytogenetic and genetic maps: 18 new polymorphic markers isolated from BAC and PAC clones. Animal Genetics 29, 348-55.
26. Morrice D.R. & Burt D.W. (1995) A SstI RFLP at the chicken transforming growth factor beta-2 locus (TGFβ2). Animal Genetics 26, 210.
27. Nanda I., Tanaka T. & Schmid M. (1996) The intron-containing ribosomal protein-encoding genes L5, L7a and L37a are unlinked in chicken. Gene 170, 159-64.
28. Pitel F., Pouzadoux A., Langlois P. et al. (1998) Mapping the chicken SCD1 locus: assignment of a linkage group to chromosome 6. Animal Genetics 29, 152.
29. Ponce de Leon F.A., Yukui L. & Smith E.J. (1991) Reassignment of the evl locus by high resolution chromosomal in situ hybridization. Poultry Science 70 (Suppl. 1), 95.
30. Rauen K.A., LeCiel C.D.S., Abbott U.K. & Hutchison N.J. (1994) Localization of the chicken PGK gene to chromosome 4p by fluorescence in situ hybridization. Journal of Heredity 85, 147-50.
31. Rigby P.W.J., Dieckmann M., Rhodes C. & Berg P. (1977) Labelling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. Journal of Molecular Biology 113, 237-51.
32. Saitoh Y., Ogawa A., Hori T., Kunita R. & Mizuno S. (1993) Identification and localization of two genes on the chicken Z chromosome: implication of evolutionary conservation of the Z chromosome among avian species. Chromosome Research 1, 239-51.
33. Shimogiri T., Kono M., Mannen H., Mizutani M. & Tsuji S. (1998) Chicken ornithine transcarbamylase gene, structure, regulation and chromosomal assignment: repetitive sequence motif in intron 3 regulates this enzyme activity. Journal of Biochemistry 124, 962-71.
34. Smith J. & Burt D.W. (1998) Parameters of the chicken genome (Gallus gallus). Animal Genetics 29, 290-4.
35. Smith E.J. & Cheng H.H. (1998) Mapping chicken genes using preferential amplification of specific alleles. Microbial and Computational Genomics 3, 13-20.
36. Soret J., Vellard M., Viegas-Pequignot E., Apiou F., Dutrillaux B. & Perbal B. (1990) Chromosomal reallocation of the chicken c-myb locus and organization of 3'-proximal coding exons. FEBS 263, 254-60.
37. Spike C.A., Bumstead N., Crittenden L.B. & Lamont S.J. (1996) RFLP mapping of expressed sequence tails in the chicken. Journal of Heredity 87, 6-9.
38. Symonds G., Stubblefield E., Guyaux M. & Bishop J.M. (1984) Cellular oncogenes (c-ERB-A and c-ERB-B) located on different chicken chromosomes can be transduced into the same viral genome. Molecular and Cell Biology 4, 1627-30.
39. Toye A.A., Bumstead N. & Moran C. (1997) A pentanucleotide repeat polymorphism maps progesterone receptor (PGR) to chicken chromosome 1. Animal Genetics 28, 317.