-
2
-
-
0029160337
-
The napEDABC gene cluster encoding the periplasmic nitrate reductase system of Thiosphaera pantotropha
-
BERKS, B.C., RICHARDSON, D.J., REILLY, A., WILLIS, A.C., FERGUSON, S.J.: The napEDABC gene cluster encoding the periplasmic nitrate reductase system of Thiosphaera pantotropha. Biochem. J. 309, 983-992 (1995).
-
(1995)
Biochem. J.
, vol.309
, pp. 983-992
-
-
Berks, B.C.1
Richardson, D.J.2
Reilly, A.3
Willis, A.C.4
Ferguson, S.J.5
-
3
-
-
34250230562
-
Evolution of bacterial denitrification and denitrifier diversity
-
BETLACH, M.R.: Evolution of bacterial denitrification and denitrifier diversity. Antonie van Leeuwenhoek 48, 585-607 (1982).
-
(1982)
Antonie Van Leeuwenhoek
, vol.48
, pp. 585-607
-
-
Betlach, M.R.1
-
4
-
-
0025368948
-
Nitrate reductases of Escherichia coli. Sequence of the second nitrate reductase and comparison with that encoded by the narGHJI operon
-
BLASCO, F., IOBBI, C., RATOUCHNIAK, J., BONNEFOY, V., CHIPPAUX, M.: Nitrate reductases of Escherichia coli. sequence of the second nitrate reductase and comparison with that encoded by the narGHJI operon. Mol. Gen. Genet. 222, 104-111 (1990).
-
(1990)
Mol. Gen. Genet.
, vol.222
, pp. 104-111
-
-
Blasco, F.1
Iobbi, C.2
Ratouchniak, J.3
Bonnefoy, V.4
Chippaux, M.5
-
6
-
-
0000228203
-
A model of evolutionary change in proteins
-
(M. O. DAYHOFF, ed.), National Biomedical Research Foundation, Washington DC
-
DAYHOFF, M.O., SCHWARTZ, R.M., ORCUTT, B.C.: A model of evolutionary change in proteins. In: Atlas of Protein Sequence Structure (M. O. DAYHOFF, ed.), Vol. 5, Suppl. 3. National Biomedical Research Foundation, Washington DC, pp. 345-352 (1978).
-
(1978)
Atlas of Protein Sequence Structure
, vol.5
, Issue.SUPPL. 3
, pp. 345-352
-
-
Dayhoff, M.O.1
Schwartz, R.M.2
Orcutt, B.C.3
-
7
-
-
0000122573
-
Phylip - Phylogenetic interference package (version 3.2)
-
FELSENSTEIN, J.: Phylip - phylogenetic interference package (version 3.2). Cladistics 5, 164-166 (1989).
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
8
-
-
0017329035
-
Numerically dominant denitrifying bacteria from world soils
-
GAMBLE, T.N., BETLACH, M.R., TIEDJE, J.M.: Numerically dominant denitrifying bacteria from world soils. Appl. Environm. Microbiol. 33, 926-939 (1977).
-
(1977)
Appl. Environm. Microbiol.
, vol.33
, pp. 926-939
-
-
Gamble, T.N.1
Betlach, M.R.2
Tiedje, J.M.3
-
9
-
-
0023919379
-
Oxygen inhibition of nitrate uptake is a general regulatory mechanism in nitrate respiration
-
HERNANDEZ, D., ROWE, J.J.: Oxygen inhibition of nitrate uptake is a general regulatory mechanism in nitrate respiration. J. Biol. Chem. 263, 7937-7939 (1988).
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 7937-7939
-
-
Hernandez, D.1
Rowe, J.J.2
-
10
-
-
0025370653
-
A simple method for subcloning DNA fragments from gel slices
-
HEERY, D.M., GANNON, F., POWELL, R.: A simple method for subcloning DNA fragments from gel slices. Trends Genet. 6(6), 173 (1990).
-
(1990)
Trends Genet.
, vol.6
, Issue.6
, pp. 173
-
-
Heery, D.M.1
Gannon, F.2
Powell, R.3
-
11
-
-
0029834661
-
Inferring complex phylogenies
-
HILLIS, D.M.: Inferring complex phylogenies. Nature 383, 130-131 (1996).
-
(1996)
Nature
, vol.383
, pp. 130-131
-
-
Hillis, D.M.1
-
12
-
-
0000732090
-
Evolution of protein molecules
-
(H. MUNRO, ed.) New York, Academic Press
-
JUKES, T.H., CANTOR, C.R.: Evolution of protein molecules. In: Mammalian Protein metabolism, pp. 21-132. (H. MUNRO, ed.) New York, Academic Press (1969).
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
13
-
-
0024307824
-
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
-
KISHINO, H., HASEGAWA, M.: Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29, 170-179 (1989).
-
(1989)
J. Mol. Evol.
, vol.29
, pp. 170-179
-
-
Kishino, H.1
Hasegawa, M.2
-
14
-
-
0020064009
-
Denitrification
-
KNOWLES, R.: Denitrification. Microbiol. Rev. 46, 43-70 (1982).
-
(1982)
Microbiol. Rev.
, vol.46
, pp. 43-70
-
-
Knowles, R.1
-
15
-
-
0026545675
-
Regulation of narK gene expresison in Escherichia coli in response to anaerobiosis, nitrite, iron, and molybdenum
-
KOLESNIKOW, T., SCHRÖDER, I., GUNSALUS, R.P.: Regulation of narK gene expresison in Escherichia coli in response to anaerobiosis, nitrite, iron, and molybdenum. J. Bacteriol. 174, 7104-7111 (1992).
-
(1992)
J. Bacteriol.
, vol.174
, pp. 7104-7111
-
-
Kolesnikow, T.1
Schröder, I.2
Gunsalus, R.P.3
-
16
-
-
0021720511
-
Respiratory nitrate reductase of Escherichia coli
-
MCPHERSON, M.J., BARON, A.J., PAPPIN, D.J.C., WOOTTON, J.C.: Respiratory nitrate reductase of Escherichia coli. FEBS letters 177, 260-264 (1984).
-
(1984)
FEBS Letters
, vol.177
, pp. 260-264
-
-
McPherson, M.J.1
Baron, A.J.2
Pappin, D.J.C.3
Wootton, J.C.4
-
17
-
-
0024356659
-
The narK gene product participates in nitrate transport induced in Escherichia coli nitrate-respiring cells
-
NOJI, S., NOHNO, T., SAITO, T., SHIGFHIKO, T.: The narK gene product participates in nitrate transport induced in Escherichia coli nitrate-respiring cells. FEBS Lett. 252, 139-143 (1989).
-
(1989)
FEBS Lett.
, vol.252
, pp. 139-143
-
-
Noji, S.1
Nohno, T.2
Saito, T.3
Shigfhiko, T.4
-
18
-
-
0023989064
-
Improved tools for biological sequence analysis
-
PEARSON, W.R., LIPMAN, D.J.: Improved tools for biological sequence analysis. Proc. Natl. Acad. Sci. USA 85, 2444-2448 (1988).
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 2444-2448
-
-
Pearson, W.R.1
Lipman, D.J.2
-
19
-
-
0025272240
-
Rapid and sensitive sequence comparison with FAST and FASTA
-
PEARSON, W.R.: Rapid and sensitive sequence comparison with FAST and FASTA. Methods Enzymol. 183, 63-98 (1990).
-
(1990)
Methods Enzymol.
, vol.183
, pp. 63-98
-
-
Pearson, W.R.1
-
20
-
-
0016279265
-
Rhodopseudomonas globiformis, sp. N., a new species of the Rhodospirillaceae
-
PFENNIG, N.: Rhodopseudomonas globiformis, sp. N., a new species of the Rhodospirillaceae. Arch. Microbiol. 100, 197-206 (1974).
-
(1974)
Arch. Microbiol.
, vol.100
, pp. 197-206
-
-
Pfennig, N.1
-
21
-
-
0032498845
-
A thermophilic nitrate reductase is responsible for the strain specific anaerobic growth of Thermus thermophilus HB8
-
RAMIREZ-ARCOS, S., FERNANDEZ-HERRERO, L.A., BERENGUER, J., RÖMERMANN, D., FRIEDRICH, B.: A thermophilic nitrate reductase is responsible for the strain specific anaerobic growth of Thermus thermophilus HB8. Biochim. Biophys. Acta 1396, 215-227 (1998).
-
(1998)
Biochim. Biophys. Acta
, vol.1396
, pp. 215-227
-
-
Ramirez-Arcos, S.1
Fernandez-Herrero, L.A.2
Berenguer, J.3
Römermann, D.4
Friedrich, B.5
-
22
-
-
0021806598
-
Denitrification by Alcaligenes eutrophus is plasmid dependent
-
RÖMERMANN, D., FRIEDRICH, B.: Denitrification by Alcaligenes eutrophus is plasmid dependent. J. Bacteriol. 162, 852-854 (1985).
-
(1985)
J. Bacteriol.
, vol.162
, pp. 852-854
-
-
Römermann, D.1
Friedrich, B.2
-
23
-
-
0029826916
-
Aeropyrum pernix gen. nov., sp. nov., a novel aerobic hyperthermophilic archaeon growing at temperatures up to 100 degrees C
-
SAKO, Y., NOMURA, N., UCHIDA, A., ISHIDA, Y., MORII, H., KOGA, Y., HOAKI, T., MARUYAMA, T.: Aeropyrum pernix gen. nov., sp. nov., a novel aerobic hyperthermophilic archaeon growing at temperatures up to 100 degrees C. Int. J. Syst. Bacteriol. 46, 1070-1077 (1996).
-
(1996)
Int. J. Syst. Bacteriol.
, vol.46
, pp. 1070-1077
-
-
Sako, Y.1
Nomura, N.2
Uchida, A.3
Ishida, Y.4
Morii, H.5
Koga, Y.6
Hoaki, T.7
Maruyama, T.8
-
24
-
-
0003903343
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
SAMBROOK, J.E., FRITSCH, F., MANIATIS, T.: Molecular cloning, a laboratory manual, 2nd ed., vol. 1-3. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y. (1989).
-
(1989)
Molecular Cloning, a Laboratory Manual, 2nd Ed.
, vol.1-3
-
-
Sambrook, J.E.1
Fritsch, F.2
Maniatis, T.3
-
25
-
-
0017681196
-
DNA sequencing with chain terminating inhibitors
-
SANGER, F., NICKLEN, S., COULSON, A.R.: DNA sequencing with chain terminating inhibitors. Proc. Natl. Acad. Sci. USA 74, 5463-5467 (1977).
-
(1977)
Proc. Natl. Acad. Sci. USA
, vol.74
, pp. 5463-5467
-
-
Sanger, F.1
Nicklen, S.2
Coulson, A.R.3
-
26
-
-
0342966964
-
Transfer and expression of lithoautotrophy and denitrification in a host lacking these metabolic activities
-
SCHNEIDER, B., NIES, A., FRIEDRICH, B.: Transfer and expression of lithoautotrophy and denitrification in a host lacking these metabolic activities. Appl. Environ. Microbiol. 54, 3173-3167 (1988).
-
(1988)
Appl. Environ. Microbiol.
, vol.54
, pp. 3173-13167
-
-
Schneider, B.1
Nies, A.2
Friedrich, B.3
-
27
-
-
0018968787
-
The assimilatory and dissimilatory nitrate reductases of mutants of Pseudomonas aeruginosa are encoded by different genes
-
SIAS, S.R., STOUTHAMER, A.H., INGRAHAM, J.L.: The assimilatory and dissimilatory nitrate reductases of mutants of Pseudomonas aeruginosa are encoded by different genes. J. Gen. Microbiol. 118, 229-234 (1980).
-
(1980)
J. Gen. Microbiol.
, vol.118
, pp. 229-234
-
-
Sias, S.R.1
Stouthamer, A.H.2
Ingraham, J.L.3
-
28
-
-
0027199905
-
Structure and function of the periplasmatic nitrate reductase in Alcaligenes eutrophus H16
-
SIDDIQUI, R.A., WARNECKE-EBERZ, U., HENGSBERGER, A., SCHNEIDER, B., KOSTKA, S., FRIEDRICH, B.: Structure and function of the periplasmatic nitrate reductase in Alcaligenes eutrophus H16. J. Bacteriol. 175, 5867-5876/1993).
-
(1993)
J. Bacteriol.
, vol.175
, pp. 5867-5876
-
-
Siddiqui, R.A.1
Warnecke-Eberz, U.2
Hengsberger, A.3
Schneider, B.4
Kostka, S.5
Friedrich, B.6
-
29
-
-
0024563361
-
Structure of genes narL and narX of the nar (nitrate reductase) locus in Escherichia coli K-12
-
STEWART, V., PARALES, J.R., MERKEL, S.M.: Structure of genes narL and narX of the nar (nitrate reductase) locus in Escherichia coli K-12. Bacteriol. 171, 2229-2234 (1989).
-
(1989)
Bacteriol.
, vol.171
, pp. 2229-2234
-
-
Stewart, V.1
Parales, J.R.2
Merkel, S.M.3
-
30
-
-
0029836454
-
Quartet puzzling: A quartet maximum likelihood method for reconstructing tree topologies
-
STRIMMER, K., VON HAESELER, A.: Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies. Mol. Biol. Evol. 13, 964-969 (1996).
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 964-969
-
-
Strimmer, K.1
Von Haeseler, A.2
-
31
-
-
0003449416
-
-
Technische Universität München, Munich, Germany. 16 March last date accessed
-
STRUNK, O., LUDWIG, W.: ARB: a software environment for sequence data. Technische Universität München, Munich, Germany. http://www.biol.chemie.tu-muenchen.de/pub/ARB/ [16 March 1999, last date accessed).
-
(1999)
ARB: A Software Environment for Sequence Data
-
-
Strunk, O.1
Ludwig, W.2
-
32
-
-
0001140522
-
Phylogeny reconstruction
-
Chapter 11, (D.M. HILLIS, C. MORITZ, eds.), Sinauer Associates, Sunderland, Massachusetts
-
SWOFFORD, D.L., OLSEN, G.J.: Phylogeny reconstruction. Chapter 11, pp. 41-501. In: Molecular Systematics (D.M. HILLIS, C. MORITZ, eds.), Sinauer Associates, Sunderland, Massachusetts (1990).
-
(1990)
Molecular Systematics
, pp. 41-501
-
-
Swofford, D.L.1
Olsen, G.J.2
-
33
-
-
0002137823
-
Ecology of denitrification and dissimilatory nitrate reduction to ammonium
-
(A.J.B. ZEHNDER, ed.), New York, Wiley & Sons
-
TIEDJE, J.M.: Ecology of denitrification and dissimilatory nitrate reduction to ammonium. In: Biology of anaerobic microorganisms (A.J.B. ZEHNDER, ed.), New York, Wiley & Sons 1982.
-
(1982)
Biology of Anaerobic Microorganisms
-
-
Tiedje, J.M.1
-
34
-
-
0027968068
-
CLUSTALW. Improving the sensitivity of progressive multiple sequence alignment through sequence weighting position-specific gap penalties and weight matrix choice
-
THOMPSON, J.D., HIGGINS, D.G., GIBSON, T.J.: CLUSTALW. improving the sensitivity of progressive multiple sequence alignment through sequence weighting position-specific gap penalties and weight matrix choice. Nucleic Res. 22, 4673-4680 (1994).
-
(1994)
Nucleic Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
35
-
-
0027337482
-
Pyrobaculum aerophilum sp. nov., a novel nitrate-reducing hyperthermophilic archaeum
-
VÖLKL, P., HUBER, R., DROBNER, E., RACHEL, R., BURGGRAF, S., TRINCONE, A., STETTER, K.O.: Pyrobaculum aerophilum sp. nov., a novel nitrate-reducing hyperthermophilic archaeum. Appl. Environ. Microbiol. 59, 2918-2926 (1993).
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 2918-2926
-
-
Völkl, P.1
Huber, R.2
Drobner, E.3
Rachel, R.4
Burggraf, S.5
Trincone, A.6
Stetter, K.O.7
-
36
-
-
0031938612
-
Localization of denitrification genes on the chromosomal map of Pseudomonas aeruginosa
-
VOLLACK, K.-U., XIE, J., HARTIG, E., RÖMLING, U., ZUMFT, W.G.: Localization of denitrification genes on the chromosomal map of Pseudomonas aeruginosa. Microbiology 144, 441-448 (1998).
-
(1998)
Microbiology
, vol.144
, pp. 441-448
-
-
Vollack, K.-U.1
Xie, J.2
Hartig, E.3
Römling, U.4
Zumft, W.G.5
-
37
-
-
0027450107
-
Three nitrate reductase activities in Alcaligenes eutrophus
-
WARNECKE-EBERZ, U., FRIEDRICH, B.: Three nitrate reductase activities in Alcaligenes eutrophus. Arch. Microbiol. 159, 405-409 (1993).
-
(1993)
Arch. Microbiol.
, vol.159
, pp. 405-409
-
-
Warnecke-Eberz, U.1
Friedrich, B.2
-
38
-
-
0018791107
-
Respiratory nitrate reductase. Ist localization in the cytoplasmic membrane of Klebsiella aerogenes and Bacillus licheniformis
-
WIENTJES, F.B., KOLK, A.H.J., NANNINGA, N., VAN'T RIET, J.: Respiratory nitrate reductase. ist localization in the cytoplasmic membrane of Klebsiella aerogenes and Bacillus licheniformis. Eur. J. Biochem. 95, 61-67 (1979).
-
(1979)
Eur. J. Biochem.
, vol.95
, pp. 61-67
-
-
Wientjes, F.B.1
Kolk, A.H.J.2
Nanninga, N.3
Van't Riet, J.4
-
39
-
-
0030070838
-
DNA recovery from soils of diverse composition
-
ZHOU, J.Z., BRUNS, M.A., TIEDJE, J.M.: DNA recovery from soils of diverse composition. Appl. Env. Microbiol. 62, 316-322 (1996).
-
(1996)
Appl. Env. Microbiol.
, vol.62
, pp. 316-322
-
-
Zhou, J.Z.1
Bruns, M.A.2
Tiedje, J.M.3
-
40
-
-
0000266664
-
The denitrifying procaryotes
-
(A. BALOWS, H.G. TRÜPER, M. DWORKIN, W. HARDER, K.-H. SCHLEIFER, eds.), New York, Springer-Verlag
-
ZUMFT, W.G.: The denitrifying procaryotes. In: The procaryotes, vol. 1 (A. BALOWS, H.G. TRÜPER, M. DWORKIN, W. HARDER, K.-H. SCHLEIFER, eds.), New York, Springer-Verlag 1992.
-
(1992)
The Procaryotes
, vol.1
-
-
Zumft, W.G.1
-
41
-
-
0031456471
-
Cell biology and molecular basis of denitrification
-
ZUMFT, W.G.: Cell biology and molecular basis of denitrification. Microbiol. Mol. Biol. Rev. 61, 533-616 (1997).
-
(1997)
Microbiol. Mol. Biol. Rev.
, vol.61
, pp. 533-616
-
-
Zumft, W.G.1
|