메뉴 건너뛰기




Volumn 144, Issue 2, 1998, Pages 441-448

Localization of denitrification genes on the chromosomal map of Pseudomonas aeruginosa

Author keywords

Denitrification; Pseudomonas aeruginosa chromosome; Pseudomonas stutzeri

Indexed keywords

AZURIN; FERREDOXIN; GENE PRODUCT; MEMBRANE PROTEIN; METHYLTRANSFERASE; NITRATE REDUCTASE; OXIDOREDUCTASE; PROTEIN SUBUNIT;

EID: 0031938612     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/00221287-144-2-441     Document Type: Article
Times cited : (34)

References (47)
  • 1
    • 0029146375 scopus 로고
    • Expression of the nir and nor genes for denitrification in Pseudomonas aeruginosa requires a novel CRP/FNR-related transcriptional regulator, DNR, in addition to ANR
    • Arai, H., Igarashi, Y. & Kodama, T. (1995). Expression of the nir and nor genes for denitrification in Pseudomonas aeruginosa requires a novel CRP/FNR-related transcriptional regulator, DNR, in addition to ANR. FEBS Lett 371, 73-76.
    • (1995) FEBS Lett , vol.371 , pp. 73-76
    • Arai, H.1    Igarashi, Y.2    Kodama, T.3
  • 2
    • 0028580539 scopus 로고
    • Isolation, sequencing and mutational analysis of a gene cluster involved in nitrite reduction in Paracoccus denitrificans
    • de Boer, A. P. N., Reijnders, W. N. M., Kuenen, J. G., Stouthamer, A. H. & van Spanning, R. J. M. (1994). Isolation, sequencing and mutational analysis of a gene cluster involved in nitrite reduction in Paracoccus denitrificans. Antonie Leeuwenhoek 66, 111-127.
    • (1994) Antonie Leeuwenhoek , vol.66 , pp. 111-127
    • De Boer, A.P.N.1    Reijnders, W.N.M.2    Kuenen, J.G.3    Stouthamer, A.H.4    Van Spanning, R.J.M.5
  • 4
    • 0026317610 scopus 로고
    • Marker exchange of the structural genes for nitric oxide reductase blocks the denitrification pathway of Pseudomonas stutzeri at nitric oxide
    • Braun, C. & Zumft, W. G. (1991). Marker exchange of the structural genes for nitric oxide reductase blocks the denitrification pathway of Pseudomonas stutzeri at nitric oxide. J Biol Chem 266, 22785-22788.
    • (1991) J Biol Chem , vol.266 , pp. 22785-22788
    • Braun, C.1    Zumft, W.G.2
  • 5
    • 0026516423 scopus 로고
    • The structural genes of the nitric oxide reductase complex from Pseudomonas stutzeri are part of a 30-kilobase gene cluster for denitrification
    • Braun, C. & Zumft, W. G. (1992). The structural genes of the nitric oxide reductase complex from Pseudomonas stutzeri are part of a 30-kilobase gene cluster for denitrification. J Bacteriol 174, 2394-2397.
    • (1992) J Bacteriol , vol.174 , pp. 2394-2397
    • Braun, C.1    Zumft, W.G.2
  • 6
    • 0027215943 scopus 로고
    • A simple and rapid method for the preparation of gram-negative bacterial genomic DNA
    • Chen, W. & Kuo, T. (1993). A simple and rapid method for the preparation of gram-negative bacterial genomic DNA. Nucleic Acids Res 21, 2260.
    • (1993) Nucleic Acids Res , vol.21 , pp. 2260
    • Chen, W.1    Kuo, T.2
  • 7
    • 0026516892 scopus 로고
    • One-hour downward alkaline capillary transfer for blotting of DNA and RNA
    • Chomczynski, P. (1992). One-hour downward alkaline capillary transfer for blotting of DNA and RNA. Anal Biochem 201, 134-139.
    • (1992) Anal Biochem , vol.201 , pp. 134-139
    • Chomczynski, P.1
  • 8
    • 0024458949 scopus 로고
    • A NosA-specific bacteriophage can be used to select denitrification-defective mutants of Pseudomonas stutzeri
    • Clark, M. A., Tang, Y. J. & Ingraham, J. L. (1989). A NosA-specific bacteriophage can be used to select denitrification-defective mutants of Pseudomonas stutzeri. J Gen Microbiol 135, 2569-2575.
    • (1989) J Gen Microbiol , vol.135 , pp. 2569-2575
    • Clark, M.A.1    Tang, Y.J.2    Ingraham, J.L.3
  • 9
    • 0027364449 scopus 로고
    • Anaerobic control of denitrification in Pseudomonas stutzeri escapes mutagenesis of an fnr-like gene
    • Cuypers, H. & Zumft, W. G. (1993). Anaerobic control of denitrification in Pseudomonas stutzeri escapes mutagenesis of an fnr-like gene. J Bacteriol 175, 7236-7246.
    • (1993) J Bacteriol , vol.175 , pp. 7236-7246
    • Cuypers, H.1    Zumft, W.G.2
  • 11
    • 0027499919 scopus 로고
    • Localization of the virulence-associated genes pilA, pilR, rpoN, fliA, fliC, ent, and fbp on the physical map of Pseudomonas aeruginosa PAO1 by pulsed-field electrophoresis
    • Farinha, M. A., Ronald, S. L., Kropinski, A. M. & Paranchych, W. (1993). Localization of the virulence-associated genes pilA, pilR, rpoN, fliA, fliC, ent, and fbp on the physical map of Pseudomonas aeruginosa PAO1 by pulsed-field electrophoresis. Infect Immun 61, 1571-1575.
    • (1993) Infect Immun , vol.61 , pp. 1571-1575
    • Farinha, M.A.1    Ronald, S.L.2    Kropinski, A.M.3    Paranchych, W.4
  • 12
    • 0025974210 scopus 로고
    • Positive FNR-like control of anaerobic arginine degradation and nitrate respiration in Pseudomonas aeruginosa
    • Galimand, M., Gamper, M., Zimmermann, A. & Haas, D. (1991). Positive FNR-like control of anaerobic arginine degradation and nitrate respiration in Pseudomonas aeruginosa. J Bacteriol 173, 1598-1606.
    • (1991) J Bacteriol , vol.173 , pp. 1598-1606
    • Galimand, M.1    Gamper, M.2    Zimmermann, A.3    Haas, D.4
  • 13
    • 0344745164 scopus 로고    scopus 로고
    • 3-type cytochrome c oxidases of Paracoccus denitrificans reveals significant differences in proton-pump design
    • 3-type cytochrome c oxidases of Paracoccus denitrificans reveals significant differences in proton-pump design. Mol Microbiol 20, 1247-1260.
    • (1996) Mol Microbiol , vol.20 , pp. 1247-1260
    • De Gier, J.-W.L.1    Schepper, M.2    Reijnders, W.N.M.3
  • 14
    • 0031013033 scopus 로고    scopus 로고
    • Genome organization of Pseudomonas stutzeri and resulting taxonomic and evolutionary considerations
    • Ginard, M., Lalucat, J., Tümmler, B. & Römling, U. (1997). Genome organization of Pseudomonas stutzeri and resulting taxonomic and evolutionary considerations. Int J Syst Bacteriol 47, 132-143.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 132-143
    • Ginard, M.1    Lalucat, J.2    Tümmler, B.3    Römling, U.4
  • 15
    • 0029970728 scopus 로고    scopus 로고
    • Sequence analysis of an internal 9·72-kb segment from the 30-kb denitrification gene cluster of Pseudomonas stutzeri
    • Glockner, A. B. & Zumft, W. G. (1996). Sequence analysis of an internal 9·72-kb segment from the 30-kb denitrification gene cluster of Pseudomonas stutzeri. Biochim Biophys Acta 1277, 6-12.
    • (1996) Biochim Biophys Acta , vol.1277 , pp. 6-12
    • Glockner, A.B.1    Zumft, W.G.2
  • 16
    • 0015548870 scopus 로고
    • Mapping and characterization of mutants of Pseudomonas aeruginosa affected in nitrate respiration in aerobic or anaerobic growth
    • van Hartingsveldt, J. & Stouthamer, A. H. (1973). Mapping and characterization of mutants of Pseudomonas aeruginosa affected in nitrate respiration in aerobic or anaerobic growth. J Gen Microbiol 74, 97-106.
    • (1973) J Gen Microbiol , vol.74 , pp. 97-106
    • Van Hartingsveldt, J.1    Stouthamer, A.H.2
  • 17
    • 0025311502 scopus 로고
    • Isolation and sequencing of the Alcaligenes denitrificans azurin-encoding gene: Comparison with the genes encoding blue copper proteins from Pseudomonas aeruginosa and Alcaligenes faecalis
    • Hoitink, C. W. G., Woudt, L. P., Turenhout, J. C. M., van de Kamp, M. & Canters, G. W. (1990). Isolation and sequencing of the Alcaligenes denitrificans azurin-encoding gene: comparison with the genes encoding blue copper proteins from Pseudomonas aeruginosa and Alcaligenes faecalis. Gene 90, 15-20.
    • (1990) Gene , vol.90 , pp. 15-20
    • Hoitink, C.W.G.1    Woudt, L.P.2    Turenhout, J.C.M.3    Van De Kamp, M.4    Canters, G.W.5
  • 18
    • 0028007233 scopus 로고
    • Genomic mapping of Pseudomonas aeru̇ginosa PAO
    • Holloway, B. W., Römling, U. & Tümmler, B. (1994). Genomic mapping of Pseudomonas aeru̇ginosa PAO. Microbiology 140, 2907-2929.
    • (1994) Microbiology , vol.140 , pp. 2907-2929
    • Holloway, B.W.1    Römling, U.2    Tümmler, B.3
  • 19
    • 0021367323 scopus 로고
    • Chromosomal location and function of genes affecting Pseudomonas aeruginosa nitrate assimilation
    • Jeter, R. M., Sias, S. R. & Ingraham, J. L. (1984). Chromosomal location and function of genes affecting Pseudomonas aeruginosa nitrate assimilation. J Bacteriol 157, 673-677.
    • (1984) J Bacteriol , vol.157 , pp. 673-677
    • Jeter, R.M.1    Sias, S.R.2    Ingraham, J.L.3
  • 20
    • 0026064290 scopus 로고
    • Close linkage in Pseudomonas stutzeri of the structural genes for respiratory nitrite reductase and nitrous oxide reductase, and other essential genes for denitrification
    • Jüngst, A., Braun, C. & Zumft, W. G. (1991a). Close linkage in Pseudomonas stutzeri of the structural genes for respiratory nitrite reductase and nitrous oxide reductase, and other essential genes for denitrification. Mol Gen Genet 225, 241-248.
    • (1991) Mol Gen Genet , vol.225 , pp. 241-248
    • Jüngst, A.1    Braun, C.2    Zumft, W.G.3
  • 21
    • 0026011830 scopus 로고
    • 1-dependent nitrite respiration of Pseudomonas stutzeri consists of a cluster of mono-, di-, and tetraheme proteins
    • 1-dependent nitrite respiration of Pseudomonas stutzeri consists of a cluster of mono-, di-, and tetraheme proteins. FEBS Lett 279, 205-209.
    • (1991) FEBS Lett , vol.279 , pp. 205-209
    • Jüngst, A.1    Wakabayashi, S.2    Matsubara, H.3    Zumft, W.G.4
  • 23
    • 0024720114 scopus 로고
    • Involvement of Pseudomonas putida RpoN sigma factor in regulation of various metabolic functions
    • Köhler, T., Harayama, S., Ramos, J.-L. & Timmis, K. N. (1989). Involvement of Pseudomonas putida RpoN sigma factor in regulation of various metabolic functions. J Bacteriol 171, 4326-4333.
    • (1989) J Bacteriol , vol.171 , pp. 4326-4333
    • Köhler, T.1    Harayama, S.2    Ramos, J.-L.3    Timmis, K.N.4
  • 25
    • 13344283427 scopus 로고    scopus 로고
    • Physical mapping of 32 genetic markers on the Pseudomonas aeruginosa PAO1 chromosome
    • Liao, X., Charlebois, I., Ouellet, C. & 9 other authors (1996). Physical mapping of 32 genetic markers on the Pseudomonas aeruginosa PAO1 chromosome. Microbiology 142, 79-86.
    • (1996) Microbiology , vol.142 , pp. 79-86
    • Liao, X.1    Charlebois, I.2    Ouellet, C.3
  • 26
    • 0020058862 scopus 로고
    • Physical and genetic characterization of symbiotic and auxotrophic mutants of Rhizobium meliloti induced by transposon Tn5 mutagenesis
    • Meade, H. M., Long, S. R., Ruvkun, G. B., Brown, S. E. & Ausubel, F. M. (1982). Physical and genetic characterization of symbiotic and auxotrophic mutants of Rhizobium meliloti induced by transposon Tn5 mutagenesis. J Bacteriol 149, 114-122.
    • (1982) J Bacteriol , vol.149 , pp. 114-122
    • Meade, H.M.1    Long, S.R.2    Ruvkun, G.B.3    Brown, S.E.4    Ausubel, F.M.5
  • 28
    • 0025055176 scopus 로고
    • 551 from Pseudomonas aeruginosa: The nucleotide sequence shows a location down-stream of the nitrite reductase gene
    • 551 from Pseudomonas aeruginosa: the nucleotide sequence shows a location down-stream of the nitrite reductase gene. FEBS Lett 259, 230-232.
    • (1990) FEBS Lett , vol.259 , pp. 230-232
    • Nordling, M.1    Young, S.2    Karlsson, B.G.3    Lundberg, L.G.4
  • 29
    • 0027440247 scopus 로고
    • Activation by nitric oxide of an oxidative-stress response that defends Escherichia coli against activated macrophages
    • Nunoshiba, T., deRojas-Walker, T., Wishnok, J. S., Tannenbaum, S. R. & Demple, B. (1993). Activation by nitric oxide of an oxidative-stress response that defends Escherichia coli against activated macrophages. Proc Natl Acad Sci USA 90, 9993-9997.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 9993-9997
    • Nunoshiba, T.1    DeRojas-Walker, T.2    Wishnok, J.S.3    Tannenbaum, S.R.4    Demple, B.5
  • 30
    • 0027469984 scopus 로고
    • Genes for a microaerobically induced oxidase complex in Bradyrhizobium japonicum are essential for a nitrogen-fixing endosymbiosis
    • Preisig, O., Anthamatten, D. & Hennecke, H. (1993). Genes for a microaerobically induced oxidase complex in Bradyrhizobium japonicum are essential for a nitrogen-fixing endosymbiosis. Proc Natl Acad Sci USA 90, 3309-3313.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 3309-3313
    • Preisig, O.1    Anthamatten, D.2    Hennecke, H.3
  • 31
    • 0025909243 scopus 로고
    • The impact of two-dimensional pulsed-field gel electrophoresis techniques for the consistent and complete mapping of bacterial genomes: Refined physical map of Pseudomonas aeruginosa PAO
    • Römling, U. & Tümmler, B. (1991). The impact of two-dimensional pulsed-field gel electrophoresis techniques for the consistent and complete mapping of bacterial genomes: refined physical map of Pseudomonas aeruginosa PAO. Nucleic Acids Res 19, 3199-3206.
    • (1991) Nucleic Acids Res , vol.19 , pp. 3199-3206
    • Römling, U.1    Tümmler, B.2
  • 32
    • 0003036703 scopus 로고
    • Bacterial genome analysis by pulsed field gel electrophoresis techniques
    • Römling, U., Heuer, T. & Tümmler, B. (1994). Bacterial genome analysis by pulsed field gel electrophoresis techniques. Adv Electrophor 7, 355-405.
    • (1994) Adv Electrophor , vol.7 , pp. 355-405
    • Römling, U.1    Heuer, T.2    Tümmler, B.3
  • 33
    • 0024059547 scopus 로고
    • Pseudomonas stutzeri ferredoxin: Close similarity to Azotobacter vinelandii and Pseudomonas ovalis ferredoxins
    • Saeki, K., Wakabayashi, S., Zumft, W. G. & Matsubara, H. (1988). Pseudomonas stutzeri ferredoxin: close similarity to Azotobacter vinelandii and Pseudomonas ovalis ferredoxins. J Biochem 104, 242-246.
    • (1988) J Biochem , vol.104 , pp. 242-246
    • Saeki, K.1    Wakabayashi, S.2    Zumft, W.G.3    Matsubara, H.4
  • 35
    • 0025866366 scopus 로고
    • Identification and molecular characterization of a transcriptional regulator from Pseudomonas aeruginosa PAO1 exhibiting structural and functional similarity to the FNR protein of Escherichia coli
    • Sawers, R. G. (1991). Identification and molecular characterization of a transcriptional regulator from Pseudomonas aeruginosa PAO1 exhibiting structural and functional similarity to the FNR protein of Escherichia coli. Mol Microbiol 5, 1469-1481.
    • (1991) Mol Microbiol , vol.5 , pp. 1469-1481
    • Sawers, R.G.1
  • 36
    • 0018968787 scopus 로고
    • The assimilatory and dissimilatory nitrate reductases of Pseudomonas aeruginosa are encoded by different genes
    • Sias, S. R., Stouthamer, A. H. & Ingraham, J. L. (1980). The assimilatory and dissimilatory nitrate reductases of Pseudomonas aeruginosa are encoded by different genes. J Gen Microbiol 118, 229-234.
    • (1980) J Gen Microbiol , vol.118 , pp. 229-234
    • Sias, S.R.1    Stouthamer, A.H.2    Ingraham, J.L.3
  • 38
    • 0023988313 scopus 로고
    • narI region of the Escherichia coli nitrate reductase (nar) operon contains two genes
    • Sodergren, E. J. & DeMoss, J. A. (1988). narI region of the Escherichia coli nitrate reductase (nar) operon contains two genes. J Bacteriol 170, 1721-1729.
    • (1988) J Bacteriol , vol.170 , pp. 1721-1729
    • Sodergren, E.J.1    Demoss, J.A.2
  • 39
    • 0024095529 scopus 로고
    • Molecular cloning, heterologous expression, and primary structure of the structural gene for the copper enzyme nitrous oxide reductase from denitrifying Pseudomonas stutzeri
    • Viebrock, A. & Zumft, W. G. (1988). Molecular cloning, heterologous expression, and primary structure of the structural gene for the copper enzyme nitrous oxide reductase from denitrifying Pseudomonas stutzeri. J Bacteriol 170, 4658-4668.
    • (1988) J Bacteriol , vol.170 , pp. 4658-4668
    • Viebrock, A.1    Zumft, W.G.2
  • 40
    • 0011728815 scopus 로고
    • Physiological role and expression of the blue copper protein azurin in Pseudomonas aeruginosa
    • Vijgenboom, E., Busch, J. E. & Canters, G. W. (1995). Physiological role and expression of the blue copper protein azurin in Pseudomonas aeruginosa. J Inorg Biochem 59, 720.
    • (1995) J Inorg Biochem , vol.59 , pp. 720
    • Vijgenboom, E.1    Busch, J.E.2    Canters, G.W.3
  • 41
    • 2642681934 scopus 로고    scopus 로고
    • Mapping of denitrification genes from Pseudomonas aeruginosa by macrorestriction analysis
    • abstract
    • Vollack, K.-U., Römling, U. & Zumft, W. G. (1996). Mapping of denitrification genes from Pseudomonas aeruginosa by macrorestriction analysis. Biospectrum 1996, 70 (abstract).
    • (1996) Biospectrum , vol.1996 , pp. 70
    • Vollack, K.-U.1    Römling, U.2    Zumft, W.G.3
  • 42
    • 0030998916 scopus 로고    scopus 로고
    • Identification of a palindromic sequence that is responsible for the up-regulation of NADPH-ferredoxin reductase in a ferredoxin I deletion strain of Azotobacter vinelandii
    • Yannone, S. M. & Burgess, B. K. (1997). Identification of a palindromic sequence that is responsible for the up-regulation of NADPH-ferredoxin reductase in a ferredoxin I deletion strain of Azotobacter vinelandii. J Biol Chem 272, 14454-14458.
    • (1997) J Biol Chem , vol.272 , pp. 14454-14458
    • Yannone, S.M.1    Burgess, B.K.2
  • 43
    • 0029020024 scopus 로고
    • Anaerobic activation of the entire denitrification pathway in Pseudomonas aeruginosa requires Anr, an analog of Fnr
    • Ye, R. W., Haas, D., Ka, J.-O., Krishnapillai, V., Zimmermann, A., Baird, C. & Tiedje, J. M. (1995). Anaerobic activation of the entire denitrification pathway in Pseudomonas aeruginosa requires Anr, an analog of Fnr. J Bacteriol 177, 3606-3609.
    • (1995) J Bacteriol , vol.177 , pp. 3606-3609
    • Ye, R.W.1    Haas, D.2    Ka, J.-O.3    Krishnapillai, V.4    Zimmermann, A.5    Baird, C.6    Tiedje, J.M.7
  • 44
    • 0029820731 scopus 로고    scopus 로고
    • Protein C (OprC) of the outer membrane of Pseudomonas aeruginosa is a copper-regulated channel protein
    • Yoneyama, H. & Nakae, T. (1996). Protein C (OprC) of the outer membrane of Pseudomonas aeruginosa is a copper-regulated channel protein. Microbiology 142, 2137-2144.
    • (1996) Microbiology , vol.142 , pp. 2137-2144
    • Yoneyama, H.1    Nakae, T.2
  • 45
    • 0031456471 scopus 로고    scopus 로고
    • Cell biology and the molecular basis of denitrification
    • Zumft, W. G. (1997). Cell biology and the molecular basis of denitrification. Microbiol Mol Biol Rev 61, 533-616.
    • (1997) Microbiol Mol Biol Rev , vol.61 , pp. 533-616
    • Zumft, W.G.1
  • 47
    • 0028158048 scopus 로고
    • Nitric oxide reductase from Pseudomonas stutzeri: Primary structure and gene organization of a novel bacterial cytochrome bc complex
    • Zumft, W. G., Braun, C. & Cuypers, H. (1994). Nitric oxide reductase from Pseudomonas stutzeri: primary structure and gene organization of a novel bacterial cytochrome bc complex. Eur J Biochem 219, 481-490.
    • (1994) Eur J Biochem , vol.219 , pp. 481-490
    • Zumft, W.G.1    Braun, C.2    Cuypers, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.