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Volumn 81, Issue 6, 2000, Pages 1473-1484

Gill-associated virus of Penaeus monodon prawns: An invertebrate virus with ORF1a and ORF1b genes related to arteri- and coronaviruses

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; CHYMOTRYPSIN; CYSTEINE PROTEINASE; HELICASE; METAL ION; NUCLEOTIDE; SERINE PROTEINASE; VIRUS PROTEIN; VIRUS RNA;

EID: 0034093105     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/0022-1317-81-6-1473     Document Type: Article
Times cited : (130)

References (57)
  • 2
    • 0028241850 scopus 로고
    • Mouse hepatitis virus strain A59 RNA polymerase gene ORF 1a: Heterogeneity among MHV strains
    • Bonilla, P. J., Gorbalenya, A. E. & Weiss, S. R. (1994). Mouse hepatitis virus strain A59 RNA polymerase gene ORF 1a: heterogeneity among MHV strains. Virology 198, 736-740.
    • (1994) Virology , vol.198 , pp. 736-740
    • Bonilla, P.J.1    Gorbalenya, A.E.2    Weiss, S.R.3
  • 5
    • 0025304673 scopus 로고
    • The primary structure and expression of the second open reading frame of the polymerase gene of the coronavirus MHV-A59; A highly conserved polymerase is expressed by an efficient ribosomal frame shifting mechanism
    • Bredenbeek, P. J., Pachuk, C. J., Noten, A. F. H., Charite, J., Luytjes, W., Weiss, S. R. & Spaan, W. J. M. (1990). The primary structure and expression of the second open reading frame of the polymerase gene of the coronavirus MHV-A59; a highly conserved polymerase is expressed by an efficient ribosomal frame shifting mechanism. Nucleic Acids Research 18, 1825-1832.
    • (1990) Nucleic Acids Research , vol.18 , pp. 1825-1832
    • Bredenbeek, P.J.1    Pachuk, C.J.2    Noten, A.F.H.3    Charite, J.4    Luytjes, W.5    Weiss, S.R.6    Spaan, W.J.M.7
  • 6
    • 0029091681 scopus 로고
    • Ribosomal frameshifting on viral RNAs
    • Brierley, I. (1995). Ribosomal frameshifting on viral RNAs. Journal of General Virology 76, 1885-1892.
    • (1995) Journal of General Virology , vol.76 , pp. 1885-1892
    • Brierley, I.1
  • 7
    • 0024411889 scopus 로고
    • Characterization of an efficient coronavirus ribosomal frameshifting signal: Requirement for an RNA pseudoknot
    • Brierley, I., Digard, P. & Inglis, S. C. (1989). Characterization of an efficient coronavirus ribosomal frameshifting signal: requirement for an RNA pseudoknot. Cell 57, 537-547.
    • (1989) Cell , vol.57 , pp. 537-547
    • Brierley, I.1    Digard, P.2    Inglis, S.C.3
  • 8
    • 0026758711 scopus 로고
    • Mutational analysis of the "slippery-sequence" component of a coronavirus ribosomal frameshifting signal
    • Brierley, I., Jenner, A. J. & Inglis, S. C. (1992). Mutational analysis of the "slippery-sequence" component of a coronavirus ribosomal frameshifting signal. Journal of Molecular Biology 227, 463-479.
    • (1992) Journal of Molecular Biology , vol.227 , pp. 463-479
    • Brierley, I.1    Jenner, A.J.2    Inglis, S.C.3
  • 9
    • 0023190594 scopus 로고
    • Small nuclear inclusion protein encoded by a plant potyvirus genome is a protease
    • Carrington, J. C. & Dougherty, W. G. (1987). Small nuclear inclusion protein encoded by a plant potyvirus genome is a protease. Journal of Virology 61, 2540-2548.
    • (1987) Journal of Virology , vol.61 , pp. 2540-2548
    • Carrington, J.C.1    Dougherty, W.G.2
  • 11
    • 0033549144 scopus 로고    scopus 로고
    • Yellow head virus from Thailand and gill-associated virus from Australia are closely related but distinct prawn viruses
    • Cowley, J. A., Dimmock, C. M., Wongteerasupaya, C., Boonsaeng, V., Panyim, S. & Walker, P. J. (1999). Yellow head virus from Thailand and gill-associated virus from Australia are closely related but distinct prawn viruses. Diseases of Aquatic Organisms 36, 153-157.
    • (1999) Diseases of Aquatic Organisms , vol.36 , pp. 153-157
    • Cowley, J.A.1    Dimmock, C.M.2    Wongteerasupaya, C.3    Boonsaeng, V.4    Panyim, S.5    Walker, P.J.6
  • 12
    • 0034624463 scopus 로고    scopus 로고
    • Detection of Australian gill-associated virus (GAV) and lymphoid organ virus (LOV) of Penaeus monodon by RT-nested PCR
    • in press
    • Cowley, J. A., Dimmock, C. M., Spann, K. M. & Walker, P. J. (2000). Detection of Australian gill-associated virus (GAV) and lymphoid organ virus (LOV) of Penaeus monodon by RT-nested PCR. Diseases of Aquatic Organisms (in press).
    • (2000) Diseases of Aquatic Organisms
    • Cowley, J.A.1    Dimmock, C.M.2    Spann, K.M.3    Walker, P.J.4
  • 15
    • 0030861788 scopus 로고    scopus 로고
    • The genome organization of the Nidovirales: Similarities and differences between arteri-, toro-, and coronaviruses
    • de Vries, A. A. F., Horzinek, M. C., Rottier, P. J. M. & de Groot, R. J. (1997). The genome organization of the Nidovirales: similarities and differences between arteri-, toro-, and coronaviruses. Seminars in Virology 8, 33-47.
    • (1997) Seminars in Virology , vol.8 , pp. 33-47
    • De Vries, A.A.F.1    Horzinek, M.C.2    Rottier, P.J.M.3    De Groot, R.J.4
  • 16
    • 0025952257 scopus 로고
    • Oligodeoxynucleotide ligation of single-stranded cDNAs: A new tool for cloning 5′ ends of mRNAs and for constructing cDNA libraries by in vitro amplification
    • Dumas, J. B., Edwards, M., Delort, J. & Mallet, J. (1991). Oligodeoxynucleotide ligation of single-stranded cDNAs: a new tool for cloning 5′ ends of mRNAs and for constructing cDNA libraries by in vitro amplification. Nucleic Acids Research 19, 5227-5232.
    • (1991) Nucleic Acids Research , vol.19 , pp. 5227-5232
    • Dumas, J.B.1    Edwards, M.2    Delort, J.3    Mallet, J.4
  • 17
    • 0028897070 scopus 로고
    • Complete sequence (20 kilobases) of the polyprotein-encoding gene 1 of transmissible gastroenteritis virus
    • Eleouet, J.-F., Rasschaert, D., Lambert, P., Levy, L., Verde, P. & Laude, H. (1995). Complete sequence (20 kilobases) of the polyprotein-encoding gene 1 of transmissible gastroenteritis virus. Virology 206, 817-822,
    • (1995) Virology , vol.206 , pp. 817-822
    • Eleouet, J.-F.1    Rasschaert, D.2    Lambert, P.3    Levy, L.4    Verde, P.5    Laude, H.6
  • 18
    • 0003437299 scopus 로고
    • Distributed by the author, Department of Genetics, University of Washington, Seattle, WA, USA
    • Felsenstein, J. (1993). PHYLIP (phylogeny inference package) version 3.5c. Distributed by the author, Department of Genetics, University of Washington, Seattle, WA, USA.
    • (1993) PHYLIP (Phylogeny Inference Package) Version 3.5c
    • Felsenstein, J.1
  • 19
    • 0026704614 scopus 로고
    • A random-PCR method (rPCR) to construct whole cDNA library from low amounts of RNA
    • Froussard, P. (1992). A random-PCR method (rPCR) to construct whole cDNA library from low amounts of RNA. Nucleic Acids Research 20, 2900.
    • (1992) Nucleic Acids Research , vol.20 , pp. 2900
    • Froussard, P.1
  • 20
    • 0027325337 scopus 로고
    • Complete genomic sequence and phylogenetic analysis of the lactate dehydrogenase elevating virus (LDV)
    • Godeny, E. K., Chen, L., Kumar, S. N., Methven, S. L., Koonin, E. V. & Brinton, M. A. (1993). Complete genomic sequence and phylogenetic analysis of the lactate dehydrogenase elevating virus (LDV). Virology 194, 585-596.
    • (1993) Virology , vol.194 , pp. 585-596
    • Godeny, E.K.1    Chen, L.2    Kumar, S.N.3    Methven, S.L.4    Koonin, E.V.5    Brinton, M.A.6
  • 21
    • 0024462161 scopus 로고
    • Viral proteins containing the purine NTP-binding sequence pattern
    • Gorbalenya, A. E. & Koonin, E. V. (1989). Viral proteins containing the purine NTP-binding sequence pattern. Nucleic Acids Research 17, 8413-8440.
    • (1989) Nucleic Acids Research , vol.17 , pp. 8413-8440
    • Gorbalenya, A.E.1    Koonin, E.V.2
  • 22
    • 0024398958 scopus 로고
    • Coronavirus genome: Predictive functional domains in the nonstructural polyprotein by comparative amino acid sequence analysis
    • Gorbalenya, A. E., Koonin, E. V., Donchenko, A. P. & Blinov, V. M. (1989). Coronavirus genome: predictive functional domains in the nonstructural polyprotein by comparative amino acid sequence analysis. Nucleic Acids Research 17, 4847-4861.
    • (1989) Nucleic Acids Research , vol.17 , pp. 4847-4861
    • Gorbalenya, A.E.1    Koonin, E.V.2    Donchenko, A.P.3    Blinov, V.M.4
  • 23
    • 0027313298 scopus 로고
    • Nucleotide sequence of the human coronavirus 229E RNA polymerase locus
    • Herold, J., Raabe, T., Schelle-Prinz, B. & Siddell, S. G. (1993). Nucleotide sequence of the human coronavirus 229E RNA polymerase locus. Virology 195, 680-691.
    • (1993) Virology , vol.195 , pp. 680-691
    • Herold, J.1    Raabe, T.2    Schelle-Prinz, B.3    Siddell, S.G.4
  • 24
    • 0024278568 scopus 로고
    • A new superfamily of replicative proteins
    • Hodgman, T. C. (1988). A new superfamily of replicative proteins. Nature 333, 22-23.
    • (1988) Nature , vol.333 , pp. 22-23
    • Hodgman, T.C.1
  • 25
    • 0024277965 scopus 로고
    • Signals for ribosomal frameshifting in the Rous sarcoma virus gag - Pol region
    • Jacks, T., Madhani, H. D., Masiarz, F. R. & Varmus, H. E. (1988). Signals for ribosomal frameshifting in the Rous sarcoma virus gag - pol region. Cell 55, 447-458.
    • (1988) Cell , vol.55 , pp. 447-458
    • Jacks, T.1    Madhani, H.D.2    Masiarz, F.R.3    Varmus, H.E.4
  • 26
    • 0025743809 scopus 로고
    • The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses
    • Koonin, E. V. (1991). The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses. Journal of General Virology 72, 2197-2206.
    • (1991) Journal of General Virology , vol.72 , pp. 2197-2206
    • Koonin, E.V.1
  • 27
    • 0022552131 scopus 로고
    • Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes
    • Kozak, M. (1986). Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 44, 283-292.
    • (1986) Cell , vol.44 , pp. 283-292
    • Kozak, M.1
  • 28
    • 0025081218 scopus 로고
    • Coronavirus: Organization, replication and expression of genome
    • Lai, M. M. C. (1990). Coronavirus: organization, replication and expression of genome. Annual Review of Microbiology 44, 303-333.
    • (1990) Annual Review of Microbiology , vol.44 , pp. 303-333
    • Lai, M.M.C.1
  • 30
    • 0021220689 scopus 로고
    • Characterization of leader RNA sequences on the virion and mRNAs of mouse hepatitis virus, a cytoplasmic RNA virus
    • Lai, M. M. C., Baric, R. S., Brayton, P. R. & Stohlman, S. A. (1984). Characterization of leader RNA sequences on the virion and mRNAs of mouse hepatitis virus, a cytoplasmic RNA virus. Proceedings of the National Academy of Sciences, USA 81, 3626-3630.
    • (1984) Proceedings of the National Academy of Sciences, USA , vol.81 , pp. 3626-3630
    • Lai, M.M.C.1    Baric, R.S.2    Brayton, P.R.3    Stohlman, S.A.4
  • 31
    • 0026074776 scopus 로고
    • The complete sequence (22 kilobases) of murine coronavirus gene 1 encoding the putative proteases and RNA polymerase
    • Lee, H.-J., Shieh, C-K., Gorbalenya, A. E., Koonin, E. V., La Monica, N., Tuler, J., Bagdzhadzhyan, A. & Lai, M. M. C. (1991). The complete sequence (22 kilobases) of murine coronavirus gene 1 encoding the putative proteases and RNA polymerase. Virology 180, 567-582.
    • (1991) Virology , vol.180 , pp. 567-582
    • Lee, H.-J.1    Shieh, C.-K.2    Gorbalenya, A.E.3    Koonin, E.V.4    La Monica, N.5    Tuler, J.6    Bagdzhadzhyan, A.7    Lai, M.M.C.8
  • 35
    • 6844254536 scopus 로고    scopus 로고
    • Yellow-head virus: A rhabdovirus-like pathogen of penaeid shrimp
    • Nadala, E. C. B., Tapay, L. M. & Loh, P. C. (1997). Yellow-head virus: a rhabdovirus-like pathogen of penaeid shrimp. Diseases of Aquatic Organisms 31, 141-146.
    • (1997) Diseases of Aquatic Organisms , vol.31 , pp. 141-146
    • Nadala, E.C.B.1    Tapay, L.M.2    Loh, P.C.3
  • 36
    • 0028088986 scopus 로고
    • Marked infidelity of human immunodeficiency virus type 1 reverse transcriptase at RNA and DNA template ends
    • Patel, P. H. & Preston, B.D. (1994). Marked infidelity of human immunodeficiency virus type 1 reverse transcriptase at RNA and DNA template ends. Proceedings of the National Academy of Sciences, USA 91, 549-553.
    • (1994) Proceedings of the National Academy of Sciences, USA , vol.91 , pp. 549-553
    • Patel, P.H.1    Preston, B.D.2
  • 37
    • 0026486193 scopus 로고
    • Mechanism of DNA strand transfer reactions catalysed by HIV-1 reverse transcriptase
    • Peliska, J. A. & Benkovic, S. J. (1992). Mechanism of DNA strand transfer reactions catalysed by HIV-1 reverse transcriptase. Science 258, 1112-1118.
    • (1992) Science , vol.258 , pp. 1112-1118
    • Peliska, J.A.1    Benkovic, S.J.2
  • 38
    • 0024836211 scopus 로고
    • RNA pseudoknots: Structure, detection, and prediction
    • Pleij, C. W. A. & Bosch, L. (1989). RNA pseudoknots: structure, detection, and prediction. Methods in Enzymalogy 180, 289-303.
    • (1989) Methods in Enzymalogy , vol.180 , pp. 289-303
    • Pleij, C.W.A.1    Bosch, L.2
  • 40
    • 0023127902 scopus 로고
    • The 5′-end sequence of the murine coronavirus genome: Implications for multiple fusion sites in leader-primed transcription
    • Shieh, C. K., Soe, L. H., Makino, S., Chang, M. F., Stohlman, S. A. & Lai, M. M. C. (1987). The 5′-end sequence of the murine coronavirus genome: implications for multiple fusion sites in leader-primed transcription. Virology 156, 321-330.
    • (1987) Virology , vol.156 , pp. 321-330
    • Shieh, C.K.1    Soe, L.H.2    Makino, S.3    Chang, M.F.4    Stohlman, S.A.5    Lai, M.M.C.6
  • 41
    • 0002049970 scopus 로고
    • The coronaviruslike superfamily
    • Edited by S. G. Siddell. New York: Plenum Press
    • Snijder, E. J. & Spaan, W. J. M. (1995). The coronaviruslike superfamily. In The Coronaviridae, pp. 239-255. Edited by S. G. Siddell. New York: Plenum Press.
    • (1995) The Coronaviridae , pp. 239-255
    • Snijder, E.J.1    Spaan, W.J.M.2
  • 42
    • 0025168429 scopus 로고
    • The carboxyl-terminal part of the putative Berne virus polymerase is expressed by ribosomal frameshifting and contains sequence motifs which indicate that toro- and coronaviruses are evolutionarily related
    • Snijder, E. J., den Boon, J. A., Bredenbeek, P. J., Horzinek, M. C., Rijnbrand, R. & Spaan, W. J. M. (1990a). The carboxyl-terminal part of the putative Berne virus polymerase is expressed by ribosomal frameshifting and contains sequence motifs which indicate that toro- and coronaviruses are evolutionarily related. Nucleic Acids Research 18, 4535-4542.
    • (1990) Nucleic Acids Research , vol.18 , pp. 4535-4542
    • Snijder, E.J.1    Den Boon, J.A.2    Bredenbeek, P.J.3    Horzinek, M.C.4    Rijnbrand, R.5    Spaan, W.J.M.6
  • 43
    • 0025017271 scopus 로고
    • A 3′-coterminal nested set of independently transcribed mRNAs is generated during Berne virus replication
    • Snijder, E. J., Horzinek, M. C. & Spaan, W. J. M. (1990b). A 3′-coterminal nested set of independently transcribed mRNAs is generated during Berne virus replication. Journal of Virology 64, 331-338.
    • (1990) Journal of Virology , vol.64 , pp. 331-338
    • Snijder, E.J.1    Horzinek, M.C.2    Spaan, W.J.M.3
  • 45
    • 0029966508 scopus 로고    scopus 로고
    • The arterivirus Nsp4 protease is the prototype of a novel group of chymotrypsin-like enzymes, the 3C-like serine proteases
    • Snijder, E. J., Wassenaar, A. L. M., van Dinten, L. C., Spaan, W. J. M. & Gorbalenya, A. E. (1996). The arterivirus Nsp4 protease is the prototype of a novel group of chymotrypsin-like enzymes, the 3C-like serine proteases. Journal of Biological Chemistry 271, 4864-4871.
    • (1996) Journal of Biological Chemistry , vol.271 , pp. 4864-4871
    • Snijder, E.J.1    Wassenaar, A.L.M.2    Van Dinten, L.C.3    Spaan, W.J.M.4    Gorbalenya, A.E.5
  • 46
    • 0022530849 scopus 로고
    • Nucleotide sequence of Mason-Pfizer monkey virus: An immunosuppressive D-type retrovirus
    • Sonigo, P., Barker, C., Hunter, E. & Wain-Hobson, S. (1986). Nucleotide sequence of Mason-Pfizer monkey virus: an immunosuppressive D-type retrovirus. Cell 45, 375-385.
    • (1986) Cell , vol.45 , pp. 375-385
    • Sonigo, P.1    Barker, C.2    Hunter, E.3    Wain-Hobson, S.4
  • 49
    • 0031592250 scopus 로고    scopus 로고
    • Gill-associated virus (GAV), a yellow head-like virus from Penaeus monodon cultured in Australia
    • Spann, K. M., Cowley, J. A., Walker, P. J. & Lester, R. J. G. (1997). Gill-associated virus (GAV), a yellow head-like virus from Penaeus monodon cultured in Australia. Diseases of Aquatic Organisms 31, 169-179.
    • (1997) Diseases of Aquatic Organisms , vol.31 , pp. 169-179
    • Spann, K.M.1    Cowley, J.A.2    Walker, P.J.3    Lester, R.J.G.4
  • 50
    • 0033605038 scopus 로고    scopus 로고
    • A yellow head virus gene probe: Application to in situ hybridization and determination of its nucleotide sequence
    • Tang, K. F.-J. & Lightner, D. V. (1999). A yellow head virus gene probe: application to in situ hybridization and determination of its nucleotide sequence. Diseases of Aquatic Organisms 35, 165-173.
    • (1999) Diseases of Aquatic Organisms , vol.35 , pp. 165-173
    • Tang, K.F.-J.1    Lightner, D.V.2
  • 51
    • 0025086640 scopus 로고
    • RNA pseudoknots: Translational frameshifting and readthrough on viral RNAs
    • ten Dam, E. B., Pleij, C. W. A. & Bosch, L. (1990). RNA pseudoknots: translational frameshifting and readthrough on viral RNAs. Virus Genes 4, 121-136.
    • (1990) Virus Genes , vol.4 , pp. 121-136
    • Ten Dam, E.B.1    Pleij, C.W.A.2    Bosch, L.3
  • 52
    • 0027968068 scopus 로고
    • Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4673-4680.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 53
    • 0026796006 scopus 로고
    • The genome of bovine ephemeral fever rhabdovirus contains two related glycoprotein genes
    • Walker, P. J., Byrne, K. A., Riding, G. A., Cowley, J. A., Wang, Y. & amp; McWilliam, S. M. (1992). The genome of bovine ephemeral fever rhabdovirus contains two related glycoprotein genes. Virology 191, 49-61.
    • (1992) Virology , vol.191 , pp. 49-61
    • Walker, P.J.1    Byrne, K.A.2    Riding, G.A.3    Cowley, J.A.4    Wang, Y.5    McWilliam, S.M.6
  • 54
    • 0028021701 scopus 로고
    • Structural and antigenic analysis of the nucleoprotein of bovine ephemeral fever rhabdovirus
    • Walker, P. J., Wang, Y., Cowley, J. A., McWilliam, S. M. & Prehaud, C. J. N. (1994). Structural and antigenic analysis of the nucleoprotein of bovine ephemeral fever rhabdovirus. Journal of General Virology 75, 1889-1899.
    • (1994) Journal of General Virology , vol.75 , pp. 1889-1899
    • Walker, P.J.1    Wang, Y.2    Cowley, J.A.3    McWilliam, S.M.4    Prehaud, C.J.N.5
  • 55
    • 0020823545 scopus 로고
    • Purification and partial characterization of a new enveloped RNA virus (Berne virus)
    • Weiss, M., Steck, F. & Horzinek, M. C. (1983). Purification and partial characterization of a new enveloped RNA virus (Berne virus). Journal of General Virology 64, 1849-1858.
    • (1983) Journal of General Virology , vol.64 , pp. 1849-1858
    • Weiss, M.1    Steck, F.2    Horzinek, M.C.3
  • 57
    • 0024477261 scopus 로고
    • On finding all suboptimal foldings of an RNA molecule
    • Zuker, M. (1989). On finding all suboptimal foldings of an RNA molecule. Science 244, 48-52.
    • (1989) Science , vol.244 , pp. 48-52
    • Zuker, M.1


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