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1
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0032175395
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Microbial dehalogenases: Enzymes recruited to convert xenobiotic substrates
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This review, together with [2,3], is a good starting point for the exploration of the literature about dehalogenases and dehalogenating microorganisms.
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Copley S.D. Microbial dehalogenases: enzymes recruited to convert xenobiotic substrates. Curr Opin Chem Biol. 2:1998;613-617. This review, together with [2,3], is a good starting point for the exploration of the literature about dehalogenases and dehalogenating microorganisms.
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(1998)
Curr Opin Chem Biol
, vol.2
, pp. 613-617
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Copley, S.D.1
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2
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0032414781
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Bacterial dehalogenation
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Fetzner S. Bacterial dehalogenation. Appl Microbiol Biotechnol. 50:1998;633-657.
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Appl Microbiol Biotechnol
, vol.50
, pp. 633-657
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Fetzner, S.1
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4
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0029991614
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Adaptation of Pseudomonas sp. GJ1 to 2-bromoethanol caused by overexpression of an NAD-dependent aldehyde dehydrogenase with low affinity for halogenated aldehydes
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Van der Ploeg J.R., Kingma J., De Vries E.J., Van der Ven J.G., Janssen D.B. Adaptation of Pseudomonas sp. GJ1 to 2-bromoethanol caused by overexpression of an NAD-dependent aldehyde dehydrogenase with low affinity for halogenated aldehydes. Arch Microbiol. 165:1996;258-264.
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Arch Microbiol
, vol.165
, pp. 258-264
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Van Der Ploeg, J.R.1
Kingma, J.2
De Vries, E.J.3
Van Der Ven, J.G.4
Janssen, D.B.5
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5
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10544227306
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Enrichment of mixed cultures capable of aerobic degradation of 1,2-dibromoethane
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Freitas dos Santos L.M., Leak D.J., Livingston A.G. Enrichment of mixed cultures capable of aerobic degradation of 1,2-dibromoethane. Appl Environ Microbiol. 62:1996;4675-4677.
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Appl Environ Microbiol
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, pp. 4675-4677
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Freitas Dos Santos, L.M.1
Leak, D.J.2
Livingston, A.G.3
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6
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0032965170
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Degradation of 1,2-dibromoethane by Mycobacterium sp. strain GP1
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The isolation of a microorganism that utilizes 1,2-dibromoethane as a growth substrate. Degradation occurs via a pathway in which 2-bromoethanol is converted to epoxyethane instead of the toxic bromoacetaldehyde.
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Poelarends G.J., van Hylckama Vlieg J.E.T., Marchesi J.R., Freitas Dos Santos L.M., Janssen D.B. Degradation of 1,2-dibromoethane by Mycobacterium sp. strain GP1. J Bacteriol. 181:1999;2050-2058. The isolation of a microorganism that utilizes 1,2-dibromoethane as a growth substrate. Degradation occurs via a pathway in which 2-bromoethanol is converted to epoxyethane instead of the toxic bromoacetaldehyde.
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(1999)
J Bacteriol
, vol.181
, pp. 2050-2058
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Poelarends, G.J.1
Van Hylckama Vlieg, J.E.T.2
Marchesi, J.R.3
Freitas Dos Santos, L.M.4
Janssen, D.B.5
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7
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0343986273
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Dehalogenation of haloalkanes by Mycobacterium tuberculosis H37Rv and other Mycobacteria
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A paper providing the first experimental evidence that many Mycobacteria produce haloalkane dehalogenases, suggesting a possible role for these microorganisms in the distribution of degradation genes in the environment. The physiological function of these enzymes is still unknown.
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Jesenska A., Sedlacek I., Damborsky J. Dehalogenation of haloalkanes by Mycobacterium tuberculosis H37Rv and other Mycobacteria. Appl Environ Microbiol. 66:2000;219-222. A paper providing the first experimental evidence that many Mycobacteria produce haloalkane dehalogenases, suggesting a possible role for these microorganisms in the distribution of degradation genes in the environment. The physiological function of these enzymes is still unknown.
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(2000)
Appl Environ Microbiol
, vol.66
, pp. 219-222
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Jesenska, A.1
Sedlacek, I.2
Damborsky, J.3
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8
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85006165469
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Cloning of two halohydrin hydrogen-halide-lyase genes of Corynebacterium sp. strain N-1074 and structural comparison of the genes and gene products
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Yu F., Nakamura T., Mizunashi W., Wanatabe I. Cloning of two halohydrin hydrogen-halide-lyase genes of Corynebacterium sp. strain N-1074 and structural comparison of the genes and gene products. Biosci Biotech Biochem. 58:1994;1451-1457.
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Biosci Biotech Biochem
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, pp. 1451-1457
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Yu, F.1
Nakamura, T.2
Mizunashi, W.3
Wanatabe, I.4
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9
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0031879208
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Degradation of 1,3-dichloropropene by Pseudomonas cichorii 170
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Poelarends G.J., Wilkens M., Larkin M.J., van Elsas J.D., Janssen D.B. Degradation of 1,3-dichloropropene by Pseudomonas cichorii 170. Appl Environ Microbiol. 64:1998;2931-2936.
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Appl Environ Microbiol
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, pp. 2931-2936
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Poelarends, G.J.1
Wilkens, M.2
Larkin, M.J.3
Van Elsas, J.D.4
Janssen, D.B.5
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10
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0034029582
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The role of horizontal gene transfer and gene integration in the evolution of 1,3-dichloropropene- And 1,2-dibromoethane-degradative pathways
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Poelarends G.J., Kulakov L.A., Larkin M.J., van Hylckama Vlieg J.E.T., Janssen D.B. The role of horizontal gene transfer and gene integration in the evolution of 1,3-dichloropropene- and 1,2-dibromoethane-degradative pathways. J Bacteriol. 182:2000;2191-2199.
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J Bacteriol
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, pp. 2191-2199
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Poelarends, G.J.1
Kulakov, L.A.2
Larkin, M.J.3
Van Hylckama Vlieg, J.E.T.4
Janssen, D.B.5
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11
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0031756487
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Development of hybrid strains for the mineralization of chloroaromatics by patchwork assembly
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An excellent overview of the different pathways for the degradation of chloroaromatics and the bottlenecks causing the persistence of chloroaromatics.
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Reineke W. Development of hybrid strains for the mineralization of chloroaromatics by patchwork assembly. Annu Rev Microbiol. 52:1998;287-331. An excellent overview of the different pathways for the degradation of chloroaromatics and the bottlenecks causing the persistence of chloroaromatics.
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(1998)
Annu Rev Microbiol
, vol.52
, pp. 287-331
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Reineke, W.1
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12
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0032838290
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Catalytic properties of the 3-chlorocatechol-oxidizing 2,3-dihydroxybiphenyl 1,2-dioxygenase from Sphingomonas sp. strain BN6
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A study on an extradiol dioxygenase that cleaves 3-chlorocatechol at the 1,6 position, rather than at the 2,3 position. The enzyme is also inactivated by chloro- and methyl-catechols, not by covalent modification but by loss of the ferric ion which is less tightly bound in the 1,6-cleaving enzyme than in 2,3-cleaving enzymes.
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Riegert U., Heiss G., Kuhm A.E., Muller C., Contzen M., Knackmuss H.J., Stolz A. Catalytic properties of the 3-chlorocatechol-oxidizing 2,3-dihydroxybiphenyl 1,2-dioxygenase from Sphingomonas sp. strain BN6. J Bacteriol. 181:1999;4812-4817. A study on an extradiol dioxygenase that cleaves 3-chlorocatechol at the 1,6 position, rather than at the 2,3 position. The enzyme is also inactivated by chloro- and methyl-catechols, not by covalent modification but by loss of the ferric ion which is less tightly bound in the 1,6-cleaving enzyme than in 2,3-cleaving enzymes.
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(1999)
J Bacteriol
, vol.181
, pp. 4812-4817
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Riegert, U.1
Heiss, G.2
Kuhm, A.E.3
Muller, C.4
Contzen, M.5
Knackmuss, H.J.6
Stolz, A.7
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13
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0030743522
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Microbial degradation of chloroaromatics: Use of the meta-cleavage pathway for mineralization of chlorobenzene
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Mars A.E., Kasberg T., Kaschabek S.R., van Agteren M.H., Janssen D.B., Reineke W. Microbial degradation of chloroaromatics: use of the meta-cleavage pathway for mineralization of chlorobenzene. J Bacteriol. 179:1997;4530-4537.
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J Bacteriol
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Mars, A.E.1
Kasberg, T.2
Kaschabek, S.R.3
Van Agteren, M.H.4
Janssen, D.B.5
Reineke, W.6
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14
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0031936515
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Degradation of chloroaromatics: Purification and characterization of a novel type of chlorocatechol 2,3-dioxygenase of Pseudomonas putida GJ31
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The biochemical characterization of CbzE, a meta-cleavage dioxygenase that is adapted to the conversion of 3-chlorocatechol, is described.
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Kaschabek S.R., Kasberg T., Müller D., Mars A.E., Janssen D.B., Reineke W. Degradation of chloroaromatics: purification and characterization of a novel type of chlorocatechol 2,3-dioxygenase of Pseudomonas putida GJ31. J Bacteriol. 180:1998;296-302. The biochemical characterization of CbzE, a meta-cleavage dioxygenase that is adapted to the conversion of 3-chlorocatechol, is described.
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(1998)
J Bacteriol
, vol.180
, pp. 296-302
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Kaschabek, S.R.1
Kasberg, T.2
Müller, D.3
Mars, A.E.4
Janssen, D.B.5
Reineke, W.6
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15
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0033064439
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Conversion of 3-chlorocatechol by various catechol 2,3-dioxygenases and sequence analysis of the chlorocatechol dioxygenase region of Pseudomonas putida GJ31
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The critical differences between two similar catechol 2,3-dioxygenases that are resistant and sensitive to 3-chlorocatechol, respectively, are identified.
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Mars A.E., Kingma J., Kaschabek S.R., Reineke W., Janssen D.B. Conversion of 3-chlorocatechol by various catechol 2,3-dioxygenases and sequence analysis of the chlorocatechol dioxygenase region of Pseudomonas putida GJ31. J Bacteriol. 181:1999;1309-1318. The critical differences between two similar catechol 2,3-dioxygenases that are resistant and sensitive to 3-chlorocatechol, respectively, are identified.
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J Bacteriol
, vol.181
, pp. 1309-1318
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Mars, A.E.1
Kingma, J.2
Kaschabek, S.R.3
Reineke, W.4
Janssen, D.B.5
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16
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0032704711
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Cloning and sequencing of a novel meta-cleavage dioxygenase gene whose product is involved in degradation of γ-hexachlorocyclohexane in Sphingomonas paucimobilis
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Miyauchi K., Adachi Y., Nagata Y., Takagi M. Cloning and sequencing of a novel meta-cleavage dioxygenase gene whose product is involved in degradation of γ-hexachlorocyclohexane in Sphingomonas paucimobilis. J Bacteriol. 181:1999;6712-6719.
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J Bacteriol
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, pp. 6712-6719
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Miyauchi, K.1
Adachi, Y.2
Nagata, Y.3
Takagi, M.4
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17
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0032885089
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PcpA, which is involved in the degradation of pentachlorophenol in Sphingomonas chlorophenolica ATCC39723, is a novel type of ring-cleavage dioxygenase
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Ohtsubo Y., Miyauchi K., Kanda K., Hatta T., Kiyohara H., Senda T., Nagata Y., Mitsui Y., Takagi M. PcpA, which is involved in the degradation of pentachlorophenol in Sphingomonas chlorophenolica ATCC39723, is a novel type of ring-cleavage dioxygenase. FEBS Lett. 459:1999;395-398.
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FEBS Lett
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, pp. 395-398
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Ohtsubo, Y.1
Miyauchi, K.2
Kanda, K.3
Hatta, T.4
Kiyohara, H.5
Senda, T.6
Nagata, Y.7
Mitsui, Y.8
Takagi, M.9
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18
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0029004313
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Understanding the diversity of trichloroethene co-oxidations
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Arp D.J. Understanding the diversity of trichloroethene co-oxidations. Curr Opin Biotechnol. 6:1995;352-358.
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Curr Opin Biotechnol
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Arp, D.J.1
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19
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0032432107
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Methanotrophs, Methylosinus trichosporium OB3b, sMMO, and their application to bioremediation
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Sullivan J.P., Dickinson D., Chase H.A. Methanotrophs, Methylosinus trichosporium OB3b, sMMO, and their application to bioremediation. Crit Rev Microbiol. 24:1998;335-373.
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Crit Rev Microbiol
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, pp. 335-373
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Sullivan, J.P.1
Dickinson, D.2
Chase, H.A.3
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20
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33748236238
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Toxicity of chlorinated organic compounds: Effects of the introduction of a chlorine in organic molecules
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Henschler D. Toxicity of chlorinated organic compounds: effects of the introduction of a chlorine in organic molecules. Angew Chem Int Ed Engl. 33:1994;1920-1935.
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Angew Chem Int Ed Engl
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Henschler, D.1
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21
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0026647083
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Trichloroethylene oxidation by toluene dioxygenase
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Li S., Wackett L.P. Trichloroethylene oxidation by toluene dioxygenase. Biochem Biophys Res Commun. 185:1992;443-451.
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Biochem Biophys Res Commun
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Li, S.1
Wackett, L.P.2
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22
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0026551420
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Aerobic vinyl chloride metabolism in Mycobacterium L1
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Hartmans S., de Bont J.A.M. Aerobic vinyl chloride metabolism in Mycobacterium L1. Appl Environ Microbiol. 58:1992;1220-1226.
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Appl Environ Microbiol
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Hartmans, S.1
De Bont, J.A.M.2
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23
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0029808095
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Transformation kinetics of chlorinated ethenes by Methylosinus trichosporium OB3b and detection of unstable epoxides by on-line gas chromatography
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Van Hylckama Vlieg J.E.T., de Koning W., Janssen D.B. Transformation kinetics of chlorinated ethenes by Methylosinus trichosporium OB3b and detection of unstable epoxides by on-line gas chromatography. Appl Environ Microbiol. 62:1996;3304-3312.
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Appl Environ Microbiol
, vol.62
, pp. 3304-3312
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Van Hylckama Vlieg, J.E.T.1
De Koning, W.2
Janssen, D.B.3
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24
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0034551758
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Bacterial sources and sinks of isoprene, a reactive atmospheric hydrocarbon
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Fall R., Copley S.D. Bacterial sources and sinks of isoprene, a reactive atmospheric hydrocarbon. Environ Microbiol. 2:2000;123-130.
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Environ Microbiol
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, pp. 123-130
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Fall, R.1
Copley, S.D.2
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25
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0025042776
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Selection of trichloroethylene (TCE) degrading bacteria that resist inactivation by TCE
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Ewers J., Clemens W., Knackmuss H-J Selection of trichloroethylene (TCE) degrading bacteria that resist inactivation by TCE. Arch Microbiol. 154:1990;410-413.
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Arch Microbiol
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Ewers, J.1
Clemens, W.2
Knackmuss, H.-J.3
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26
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0031879205
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A glutathione S-transferase with activity towards cis-1,2-dichloroepoxyethane is involved in isoprene-utilization by Rhodococcus sp. strain AD45
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The first description of a microbial enzyme that converts dichloroepoxy ethanes to non-chlorinated products.
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Van Hylckama Vlieg J.E.T., Kingma J., van den Wijngaard A.J., Janssen D.B. A glutathione S-transferase with activity towards cis-1,2-dichloroepoxyethane is involved in isoprene-utilization by Rhodococcus sp. strain AD45. Appl Environ Microbiol. 64:1998;2800-2805. The first description of a microbial enzyme that converts dichloroepoxy ethanes to non-chlorinated products.
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Appl Environ Microbiol
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, pp. 2800-2805
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Van Hylckama Vlieg, J.E.T.1
Kingma, J.2
Van Den Wijngaard, A.J.3
Janssen, D.B.4
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27
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0032956206
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Purification of a glutathione S-transferase and glutathione conjugate-specific dehydrogenase involved in isoprene metabolism in Rhodococcus sp. strain AD45
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Van Hylckama Vlieg J.E.T., Kingma J., Kruizinga W., Janssen D.B. Purification of a glutathione S-transferase and glutathione conjugate-specific dehydrogenase involved in isoprene metabolism in Rhodococcus sp. strain AD45. J Bacteriol. 181:1999;2094-2101.
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J Bacteriol
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, pp. 2094-2101
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Van Hylckama Vlieg, J.E.T.1
Kingma, J.2
Kruizinga, W.3
Janssen, D.B.4
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28
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0034020589
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Characterization of the gene cluster involved in isoprene metabolism in Rhodococcus sp. strain AD45
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Van Hylckama Vlieg J.E.T., Leemhuis H., Lutje Spelberg J.H., Janssen D.B. Characterization of the gene cluster involved in isoprene metabolism in Rhodococcus sp. strain AD45. J Bacteriol. 182:2000;1956-1963.
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J Bacteriol
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Van Hylckama Vlieg, J.E.T.1
Leemhuis, H.2
Lutje Spelberg, J.H.3
Janssen, D.B.4
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29
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0032953992
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Organ-specific carcinogenicity of haloalkenes mediated by glutathione conjugation
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Dekant W., Henschler D. Organ-specific carcinogenicity of haloalkenes mediated by glutathione conjugation. J Cancer Res Clin Oncol. 125:1999;174-181.
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Dekant, W.1
Henschler, D.2
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30
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0030445133
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Exploration of the relationship between tetrachlorohydroquinone dehalogenase and the glutathione S-transferase superfamily
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McCarthy D.L., Navarrete S., Willett W.S., Babbitt P.C., Copley S.D. Exploration of the relationship between tetrachlorohydroquinone dehalogenase and the glutathione S-transferase superfamily. Biochemistry. 35:1996;14634-14642.
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Biochemistry
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McCarthy, D.L.1
Navarrete, S.2
Willett, W.S.3
Babbitt, P.C.4
Copley, S.D.5
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31
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0031958234
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Effects of bacterial host and dichloromethane dehalogenase on the competitiveness of methylotrophic bacteria growing with dichloromethane
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Gisi D., Willi L., Traber H., Leisinger T., Vuilleumier S. Effects of bacterial host and dichloromethane dehalogenase on the competitiveness of methylotrophic bacteria growing with dichloromethane. Appl Environ Microbiol. 64:1998;1194-1202.
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, pp. 1194-1202
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Gisi, D.1
Willi, L.2
Traber, H.3
Leisinger, T.4
Vuilleumier, S.5
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