Phylogenetic relationships within Zygophyllaceae based on DNA sequences of three plastid regions, with special emphasis on Zygophylloideae

Systematic Botany

Volumn 25, Issue 2, 2000, Pages 371-384

  Sheahan, Mary C ^a   Chase, Mark W ^a  

^a ROYAL BOTANIC GARDENS   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

AUGEA; FAGONIA; MORKILLIA; PINTOA; SERICODES; TETRAENA; TRIBULOPIS; ZYGOPHYLLUM;

EID: 0034085597     PISSN: 03636445     EISSN: None     Source Type: Journal    
DOI: 10.2307/2666648     Document Type: Article

References (60)

1. ALBERT, V. A., M. W. CHASE, and B. D. MISHLER. 1993. Character-state weighting for cladistic analysis of protein-coding DNA sequences. Annals of the Missouri Botanical Garden 80: 752-766.
2. ANGIOSPERM PHYLOGENY GROUP. 1998. An ordinal classification for the families of flowering plants. Annals of the Missouri Botanical Garden 85: 531-553.
3. BARKER, R. M. 1998. Notes on the genus Tribulopis (Zygophyllaceae) in Australia. Journal of the Adelaide Botanic Garden, 18: 77-93.
4. BOGLER, D. J. and B. B. SIMPSON. 1996. Phylogeny of Agavaceae based on ITS rDNA sequence variation. American Journal of Botany 83: 1225-1235.
5. BORISOVA, A. G. 1974. Zygophyllum. In B. K. Shishkin and E. G. Bobrov (eds.), Flora of the U S. S. R., vol. 14 (Translation of the 1949 Russian edition). Israel Program for Scientific Translations, Jerusalem.
6. CHASE, M. W., D. E. SOLTIS, R. G. OLMSTEAD, D. MORGAN, D. H. LES, B. D. MISHLER, M. R. DUVALL, R. A. PRICE, H. G. HILLS, Y.-L. QIU, K. A. KRON, J. H. RETTIG, E. CONTI, J. D. PALMER, J. R. MANHART, K. J. SYTSMA, H. J. MICHAELS, W. J. KRESS, K. G. KAROL, W. D. CLARK, M. HEDRÉN, B. S. GAUT, R. K. JANSEN, K.-J. KIM, C. F. WIMPEE, J. F. SMITH, G. R. FURNIER, S. H. STRAUSS, Q.Y. XIANG, G. M. PLUNKETT, P. S. SOLTIS, S. M. SWENSEN, S. E. WILLIAMS, P. A. GADEK, C. J. QUINN, L. E. EGUIARTE, E. GOLENBERG, G. H. LEARN, JR, S. W. GRAHAM, S. C. H. BARRETT, S. DAYANANDAN, and V. A. ALBERT. 1993. Phylogenetics of seed plants; an analysis of nucleotide sequences from the plastid gene rbcL. Annals of the Missouri Botanical Garden 80: 528-580.
7. 3 carboxylation characteristics in the genus Zygophyllum. Annals of the Missouri Botanical Garden 59: 465-70.
8. DOYLE, J. J. 1992. Gene trees and species trees: molecular systematics as one-character taxonomy. Systematic Botany 17: 144-163.
9. _ and J. L. DOYLE. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin 19: 11-15.
10. EL HADIDI, M. N. 1975. Zygophyllaceae in Africa. Boissieria 24: 317-323.
11. _. 1978a. Adumbratio florae aethiopicae: Zygophyllaceae. Webbia 33: 45-101.
12. _. 1978b. The genus Zygophyllum in Egypt. Botanisker Notiser 131: 439-443.
13. _. 1985. Zygophyllaceae. In R. M. Polhill [ed.], Flora of Tropical E. Africa. Balkema, Rotterdam.
14. ENGLER, A. 1896. Über die geographische Verbreitung der Zygophyllaceen. Königlich Akademie der Wissenschaften, Berlin.
15. _. 1931. Zygophyllaceae. In A. Engler and K. Prantl [eds.], Die natürliche Pflanzenfamilien, 2nd ed., vol. 19a, Section 2. Engelmann, Leipzig.
16. ERDTMAN, G. 1952. Pollen morphology and plant taxonomy. Chronica Botanica, Waltham, Mass.
17. FAHN, A. and C. SHIMONY. 1996. Glandular trichomes of Fagonia L. (Zygophyllaceae) species: structure, development and secreted materials. Annals of Botany 77: 25-34.
18. _, E. WERKER, and P. BAAS. 1986. Wood anatomy and identification of trees and shrubs from Israel and adjacent regions. Israel Academy of Science and Humanities, Jerusalem.
19. FARRIS, J. S. 1969. A successive approximations approach to character weighting. Systematic Zoology 18: 374-385.
20. FAY, M. F., C. BAYER, W. C. ALVERSON, A. Y. DE BRUIJN, and M. W. CHASE. 1998. Plastid rbcL sequence data indicate a close affinity between Diegodendron and Bixa. Taxon 47: 43-50.
21. FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
22. FITCH, W. M. 1971. Towards defining the course of evolution: minimum change for a specific tree topology. Systematic Zoology 20: 406-416.
23. GADEK, P., E. S. FERNANDO, C. J. QUINN, S. B. HOOT, T. TERRAZAS, M. C. SHEAHAN, and M. W. CHASE. 1996. Sapindales: molecular delimitation and infraordinal groups. American Journal of Botany 83: 802-811.
24. GIELLY, L. and P. TABERLET. 1996. A phylogeny of the European gentians inferred from chloroplast trnL (UAA) intron sequences. Botanical Journal of the Linnean Society 120: 57-75.
25. GRAYBEAL, A. 1998. Is it better to add taxa or characters to a difficult phylogenetic problem? Systematic Biology 47: 9-17.
26. HEGNAUER, R. 1973. Chemotaxonomie der Pflanzen. Birkhauser, Basle and Stuttgart.
27. HUTCHINSON, J. 1967. The genera of flowering plants, II: Dicotyledones. Clarendon Press, Oxford.
28. KIM, J. H., H. 'T HART, and T. H. M. MES. 1996. The phylogenetic position of East Asian Sedum species (Crassulaceae) based on chloroplast DNA trnL (UAL)-trnF (GAA) intergenic spacer sequence variation. Acta Botanica Neerlandica 45: 309-321.
29. LLEDÓ, M. D., M. B. CRESPO, K. M. CAMERON, M. F. FAY, and M. W. CHASE. 1998. Systematics of Plumbaginaceae based upon cladistic analysis of rbcL sequence data. Systematic Botany 23: 21-29.
30. MA, Y. and S. ZHANG. 1990. Study on the systematic position of Tetraena Maxim. Acta Phytotaxonomica Sinica 28: 89-95.
31. MADDISON, W. P. and D. R. MADDISON. 1992. MacClade (version 3). Sinauer Associates, Sunderland, Mass.
32. MARLOTH, R. 1925. The Flora of South Africa, vol. 2. Darter, Cape Town.
33. MATHUR A. and M. M. BHANDARI. 1983. Studies on pollen grains of Fagonia and Seetzenia species. Journal of Economic and Taxonomic Botany 4: 331-334.
34. MORION, B. R. 1997. The influence of neighboring base composition on substitutions in plant chloroplast coding sequences. Molecular Biology and Evolution 14: 189-194.
35. _ and M. T. CLEGC. 1995. Neighboring base composition is strongly correlated with base substitution bias in a region of the chloroplast genome. Journal of Molecular Evolution 41: 597-603.
36. OZENDA, P. and P. QUÉZEL. 1956. Les Zygophyllacées de l'Afrique du Nord et du Sahara. Travaux de l'Institut de Recherches sahariennes 14: 23-64.
37. POGGIO, L. 1978. Estudios cromosómicos en Bulnesia, Pintoa, Porlieria, Plectrocarpa y Sericodes (Zygophyllaceae). Darwiniana 21: 139-151.
38. Popov, G. 1925. Generis Zygophylli species asiaticae. Bulletin de l'Universite de l'Asie centrale (Taschkent) 11: 105-122.
39. _. 1926. Generis Zygophylli species asiaticae. Bulletin de l'Universite de l'Asie centrale (Taschkent) 12: 109-125.
40. PORTER, D. M. 1974. Disjunct distributions in the New World Zygophyllaceae. Taxon 23: 339-346.
41. SAVOLAINEN, V., M. W. CHASE, S. B. HOOT, C. M. MORTON, D. E. SOLTIS, C. BAYER, M. F. FAY, A. DE BRUIJN, S. SULLIVAN, and Y.-L. QIU. (in press). Phylogenetics of flowering plants based upon a combined analysis of plastid atpB and rbcL gene sequences. Systematic Biology.
42. SCHOLZ, H. 1964. Zygophyllaceae. In H. Melchior [ed.], A. Engler's Syllabus der Pflanzenfamilien, 12th ed., vol. 2. Bornträger. Berlin.
43. SCHREIBER, A. 1966. Zygophyllaceae. In H. Merxmüller [ed.], Prodromus einer flora von Südwestafrika, vol. 1. Cramer, Munich.
44. SHEAHAN, M. C. and M. W. CHASE. 1996. A phylogenetic analysis of Zygophyllaceae R. Br. based on morphological, anatomical and rbcL DNA sequence data. Botanical Journal of the Linnean Society 122: 279-300.
45. _ and D. C. CUTLER. 1993. Contribution of vegetative anatomy to the systematics of the Zygophyllaceae R. Br. Botanical Journal of the Linnean Society 113: 227-262.
46. SOLTIS, D.E., P. S. SOLTIS, M. W. CHASE, D. ALBACH, M. E. MORT, V. SAVOLAINEN, and M. ZANIS. 1998. Molecular phylogenetics of angiosperms: congruent patterns inferred from three genes. American Journal of Botany 85: page 157 (Abstract).
47. TABERLET, P., L. GIELLY, G. PAUTOU, and J. BOUVET. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-9.
48. THOMPSON, J. D., D. G. HIGGINS, and T. J. GIBSON. 1995. ClustalW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position, specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680.
49. THULIN, M. 1993. Zygophyllaceae (including Tribulaceae). In M. Thulin [ed.], Flora of Somalia, vol.1. Royal Botanic Gardens, Kew.
50. VAN HUYSSTEEN, D. C. 1937. Morphologisch-systematische Studien über die Gattung Zygophyllum. Dissertation der Mathematisch-Natürwissenschaftlichen Fakultät der Friedrich-Wilhelms Universität zu Berlin.
51. VAN ZYL, L. and E. M. MARAIS (in press). Three new species of Zygophyllum (Zygophyllaceae) from Namibia and the Northern Cape Province, South Africa. Bothalia.
52. VENDRAMIN, G. G., L. LELLI, P. ROSSI, and M. MORGANTE. 1996. A set of primers for the amplification of 20 chloroplast microsatellites in Pinaceae. Molecular Ecology 5: 595-598.
53. WEI, N. 1991. A comparative anatomy on the vegetative organs of Tetraena mongolica Maxim and Zygophyllum xanthoxylum (Bunge) Maxim. Acta Scientiarum Naturalium Universitatis Intramongolicae 22: 528-33.
54. WIENS, J. J. 1998. Combining data sets with different phylogenetic histories. Systematic Biology 47: 568-581.
55. WIGGINS, I. L. 1980. Flora of Baja California. Stanford: Stanford University Press.
56. WU, S. and L. TU. 1990. The embryology of Tetraena mongolica Maxim. Acta Scientiarum Naturalium Universitatis Intramongolicae 21: 177-83.
57. XI, Y. and S. ZHOU. 1989. Pollen morphology and its exine ultrastructure of the Zygophyllaceae in China. Botanical Research (China) 4: 75-86.
58. _ and _. 1992. A contribution to the pollen morphology of Tetraena and Malpighiaceae, with discussion of the affinity and taxonomic position of Tetraena. Chinese Journal of Botany 4: 6-12.
59. YANG, Z. 1998. On the best evolutionary rate for phylogenetic analysis. Systematic Biology 47: 125-133.
60. ZURAWSKI, G., M. T. CLEGG, and A. H. D. BROWN. 1984. The nature of nucleotide sequence divergence between barley and maize chloroplast DNA. Genetics 106: 735-749.