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Volumn 16, Issue 4, 2000, Pages 367-371

On the convergence of a clustering algorithm for protein-coding regions in microbial genomes

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; DNA;

EID: 0034084864     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/16.4.367     Document Type: Article
Times cited : (17)

References (17)
  • 1
    • 0032544103 scopus 로고    scopus 로고
    • Self-identification of protein-coding regions in microbial genomes
    • Audic, S. and Claverie, J. (1998) Self-identification of protein-coding regions in microbial genomes. Proc. Natl Acad. Sci. USA, 95, 10026-10031.
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 10026-10031
    • Audic, S.1    Claverie, J.2
  • 3
    • 0001588636 scopus 로고
    • Smooth on-line learning algorithms for hidden Markov models
    • Baldi, P. and Chauvin, Y. (1994) Smooth on-line learning algorithms for hidden Markov models. Neural Computation, 6, 305-316.
    • (1994) Neural Computation , vol.6 , pp. 305-316
    • Baldi, P.1    Chauvin, Y.2
  • 4
    • 0000241874 scopus 로고
    • Genmark: Parallel gene recognition for both DNA strands
    • Borodovsky, M. and McIninch, J.D. (1993) Genmark: parallel gene recognition for both DNA strands. Computers Chem., 17, 123-133.
    • (1993) Computers Chem. , vol.17 , pp. 123-133
    • Borodovsky, M.1    McIninch, J.D.2
  • 6
    • 0028503078 scopus 로고
    • Deriving non-homogeneous Markov chain models by cluster analysis algorithm minimizing multiple alignment entropy
    • Borodovsky, M. and Peresetsky, A. (1994) Deriving non-homogeneous Markov chain models by cluster analysis algorithm minimizing multiple alignment entropy. Computers Chem., 18, 259-268.
    • (1994) Computers Chem. , vol.18 , pp. 259-268
    • Borodovsky, M.1    Peresetsky, A.2
  • 7
    • 0031586003 scopus 로고    scopus 로고
    • Prediction of complete gene structures in human genomic DNA
    • Burge, C. and Karlin, S. (1997) Prediction of complete gene structures in human genomic DNA. J. Mol. Biol., 268, 78-94.
    • (1997) J. Mol. Biol. , vol.268 , pp. 78-94
    • Burge, C.1    Karlin, S.2
  • 8
    • 0002629270 scopus 로고
    • Maximum likelihood from incomplete data via the EM algorithm
    • Dempster, A.P., Laird, N.M. and Rubin, D.B. (1977) Maximum likelihood from incomplete data via the EM algorithm. J. Royal Stat. Soc., B39, 1-22.
    • (1977) J. Royal Stat. Soc. , vol.B39 , pp. 1-22
    • Dempster, A.P.1    Laird, N.M.2    Rubin, D.B.3
  • 11
    • 0027059264 scopus 로고
    • Assessment of protein coding measures
    • Fickett, J.W. and Tung, C.S. (1992) Assessment of protein coding measures. Nucleic Acid Res., 20, 6441-6450.
    • (1992) Nucleic Acid Res. , vol.20 , pp. 6441-6450
    • Fickett, J.W.1    Tung, C.S.2
  • 12
    • 0032415865 scopus 로고    scopus 로고
    • How to interpret an anonymous bacterial genome: Machine learning approach to gene identification
    • Hayes, W.S. and Borodovsky, M. (1998) How to interpret an anonymous bacterial genome: machine learning approach to gene identification. Genome Res., 8, 1154-1171.
    • (1998) Genome Res. , vol.8 , pp. 1154-1171
    • Hayes, W.S.1    Borodovsky, M.2
  • 13
    • 0028181441 scopus 로고
    • Hidden Markov models in computational biology: Applications to protein modeling
    • Krogh, A., Brown, M., Mian, J.S., Sjolander, K. and Haussler, D. (1994) Hidden Markov models in computational biology: applications to protein modeling. J. Mol. Biol., 235, 1501-1531.
    • (1994) J. Mol. Biol. , vol.235 , pp. 1501-1531
    • Krogh, A.1    Brown, M.2    Mian, J.S.3    Sjolander, K.4    Haussler, D.5
  • 14
    • 0033524964 scopus 로고    scopus 로고
    • Classification of A.thaliana gene sequences: Clustering of coding sequences into two groups according to codon usage improves gene prediction
    • Mathe, C., Peresetsky, A., Dehais, P., Montagu, V. and Rouze, P. (1999) Classification of A.thaliana gene sequences: clustering of coding sequences into two groups according to codon usage improves gene prediction. J. Mol. Biol., 285, 1977-1991.
    • (1999) J. Mol. Biol. , vol.285 , pp. 1977-1991
    • Mathe, C.1    Peresetsky, A.2    Dehais, P.3    Montagu, V.4    Rouze, P.5
  • 15
    • 0024610919 scopus 로고
    • A tutorial on hidden Markov models and selected applications in speech recognition
    • Rabiner, L.R. (1989) A tutorial on hidden Markov models and selected applications in speech recognition. Proc. IEEE, 77, 257-286.
    • (1989) Proc. IEEE , vol.77 , pp. 257-286
    • Rabiner, L.R.1
  • 16
    • 0032518163 scopus 로고    scopus 로고
    • Microbial gene identification using interpolated Markov models
    • Salzberg, S.L., Delcher, A.L., Kasif, S. and White, O. (1998) Microbial gene identification using interpolated Markov models. Nucleic Acids Res., 26, 544-548.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 544-548
    • Salzberg, S.L.1    Delcher, A.L.2    Kasif, S.3    White, O.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.