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Volumn 10, Issue 3, 2000, Pages 380-383

Structural genomics of microbes: An objective

Author keywords

[No Author keywords available]

Indexed keywords

GENE SEQUENCE; GENE STRUCTURE; MICROBIAL GENETICS; OPEN READING FRAME; PRIORITY JOURNAL; PROTEIN FOLDING; SHORT SURVEY;

EID: 0034068863     PISSN: 0959440X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0959-440X(00)00100-7     Document Type: Review
Times cited : (34)

References (29)
  • 1
    • 85031642800 scopus 로고    scopus 로고
    • The Institute of Genomic Research Microbial Genome Database on World Wide Web URL
    • The Institute of Genomic Research Microbial Genome Database on World Wide Web URL: http://www.tigr.org/tdb/mdb/mdb.html.
  • 2
    • 0030847766 scopus 로고    scopus 로고
    • Protein Data Bank archives of three-dimensional macromolecular structures
    • Abola E.E., Prilusky J., Manning N.O. Protein Data Bank archives of three-dimensional macromolecular structures. Methods Enzymol. 277:1997;556-571.
    • (1997) Methods Enzymol , vol.277 , pp. 556-571
    • Abola, E.E.1    Prilusky, J.2    Manning, N.O.3
  • 3
    • 0032902398 scopus 로고    scopus 로고
    • The past and future of structure databases
    • Berman H.M. The past and future of structure databases. Curr Opin Biotechnol. 10:1999;76-80.
    • (1999) Curr Opin Biotechnol , vol.10 , pp. 76-80
    • Berman, H.M.1
  • 4
    • 0028961335 scopus 로고
    • SCOP: A structural classification of proteins for the investigation of sequences and structures
    • Murzin A., Brenner S.E., Hubbard T., Chothia C. SCOP: a structural classification of proteins for the investigation of sequences and structures. J Mol Biol. 247:1995;536-540.
    • (1995) J Mol Biol , vol.247 , pp. 536-540
    • Murzin, A.1    Brenner, S.E.2    Hubbard, T.3    Chothia, C.4
  • 5
    • 0032568596 scopus 로고    scopus 로고
    • Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships
    • Brenner S.E., Chothia C., Hubbard T.J. Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships. Proc Natl Acad Sci USA. 95:1998;6073-6078.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 6073-6078
    • Brenner, S.E.1    Chothia, C.2    Hubbard, T.J.3
  • 6
    • 0031865006 scopus 로고    scopus 로고
    • Touring protein fold space with Dali/FSSP
    • A protein fold classification method based on a computer algorithm
    • Holm L., Sander C. Touring protein fold space with Dali/FSSP. Nucleic Acids Res. 26:1998;316-319. A protein fold classification method based on a computer algorithm.
    • (1998) Nucleic Acids Res , vol.26 , pp. 316-319
    • Holm, L.1    Sander, C.2
  • 7
    • 0032926060 scopus 로고    scopus 로고
    • The CATH database provides insights into protein structure/function relationships
    • A protein fold classification method based on computational and visual inspections
    • Orengo C.A., Pearl F.M., Bray J.E., Todd A.E., Martin A.C., Lo Conte L., Thornton J.M. The CATH database provides insights into protein structure/function relationships. Nucleic Acids Res. 27:1999;275-279. A protein fold classification method based on computational and visual inspections.
    • (1999) Nucleic Acids Res , vol.27 , pp. 275-279
    • Orengo, C.A.1    Pearl, F.M.2    Bray, J.E.3    Todd, A.E.4    Martin, A.C.5    Lo Conte, L.6    Thornton, J.M.7
  • 8
    • 0030720480 scopus 로고    scopus 로고
    • A structural census of the current population of protein sequences
    • Gerstein M., Levitt M. A structural census of the current population of protein sequences. Proc Natl Acad Sci USA. 94:1997;11911-11916.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 11911-11916
    • Gerstein, M.1    Levitt, M.2
  • 9
    • 0030724017 scopus 로고    scopus 로고
    • Assigning folds to the proteins encoded by the genome of Mycoplasma genitalium
    • Fischer D., Eisenberg D. Assigning folds to the proteins encoded by the genome of Mycoplasma genitalium. Proc Natl Acad Sci USA. 94:1997;11929-11934.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 11929-11934
    • Fischer, D.1    Eisenberg, D.2
  • 10
    • 0031892162 scopus 로고    scopus 로고
    • How many membrane proteins are there?
    • Boyd D., Schierle C., Beckwith J. How many membrane proteins are there? Protein Sci. 7:1998;201-205.
    • (1998) Protein Sci , vol.7 , pp. 201-205
    • Boyd, D.1    Schierle, C.2    Beckwith, J.3
  • 11
    • 0026511848 scopus 로고
    • A databank merging related protein structures and sequences
    • Pascarella S., Argos P. A databank merging related protein structures and sequences. Protein Eng. 5:1992;121-137.
    • (1992) Protein Eng , vol.5 , pp. 121-137
    • Pascarella, S.1    Argos, P.2
  • 12
    • 0028593509 scopus 로고
    • Protein superfamilies and domain superfolds
    • Orengo C.A., Jones D.T., Thornton J.M. Protein superfamilies and domain superfolds. Nature. 372:1994;631-634.
    • (1994) Nature , vol.372 , pp. 631-634
    • Orengo, C.A.1    Jones, D.T.2    Thornton, J.M.3
  • 14
    • 0029785147 scopus 로고    scopus 로고
    • Mapping the protein universe
    • Holm L., Sander C. Mapping the protein universe. Science. 273:1996;595-602.
    • (1996) Science , vol.273 , pp. 595-602
    • Holm, L.1    Sander, C.2
  • 15
    • 0031022601 scopus 로고    scopus 로고
    • LPFC: An Internet library of protein family core structures
    • Schmidt R., Gerstein M., Altman R. LPFC: an Internet library of protein family core structures. Protein Sci. 6:1997;246-248.
    • (1997) Protein Sci , vol.6 , pp. 246-248
    • Schmidt, R.1    Gerstein, M.2    Altman, R.3
  • 16
    • 0032545151 scopus 로고    scopus 로고
    • Estimating the number of protein folds
    • Zhang C., DeLisi C. Estimating the number of protein folds. J Mol Biol. 284:1998;1301-1305.
    • (1998) J Mol Biol , vol.284 , pp. 1301-1305
    • Zhang, C.1    Delisi, C.2
  • 19
    • 0030811859 scopus 로고    scopus 로고
    • Comparative analysis of the genomes of the bacteria Mycoplasma pneumoniae and Mycoplasma genitalium
    • Himmelreich R., Plagens H., Hilbert H., Reiner B., Herrmann R. Comparative analysis of the genomes of the bacteria Mycoplasma pneumoniae and Mycoplasma genitalium. Nucleic Acids Res. 25:1997;701-712.
    • (1997) Nucleic Acids Res , vol.25 , pp. 701-712
    • Himmelreich, R.1    Plagens, H.2    Hilbert, H.3    Reiner, B.4    Herrmann, R.5
  • 20
    • 0031770391 scopus 로고    scopus 로고
    • Molecular biology and pathogenecity of mycoplasmas
    • Razin S., Yogev D., Noat Y. Molecular biology and pathogenecity of mycoplasmas. Microbiol Mol Biol Rev. 62:1998;1094-1156.
    • (1998) Microbiol Mol Biol Rev , vol.62 , pp. 1094-1156
    • Razin, S.1    Yogev, D.2    Noat, Y.3
  • 21
    • 0032424307 scopus 로고    scopus 로고
    • Structural assignments to the Mycoplasma genitalium proteins show extensive gene duplications and domain rearrangements
    • Teichmann S.A., Park J., Chothia C. Structural assignments to the Mycoplasma genitalium proteins show extensive gene duplications and domain rearrangements. Proc Natl Acad Sci USA. 95:1998;14658-14663.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 14658-14663
    • Teichmann, S.A.1    Park, J.2    Chothia, C.3
  • 22
    • 0033008596 scopus 로고    scopus 로고
    • Distribution of protein folds in the three superkindoms of life
    • A survey of protein folds among different groups of organisms
    • Wolf Y.I., Brenner S.E., Bash P.A., Koonin E.V. Distribution of protein folds in the three superkindoms of life. Genome Res. 9:1999;17-26. A survey of protein folds among different groups of organisms.
    • (1999) Genome Res , vol.9 , pp. 17-26
    • Wolf, Y.I.1    Brenner, S.E.2    Bash, P.A.3    Koonin, E.V.4
  • 25
    • 0029789824 scopus 로고    scopus 로고
    • Minimal gene set for cellular life derived by comparison of complete bacterial genomes
    • Mushegian A.R., Koonin E.V. Minimal gene set for cellular life derived by comparison of complete bacterial genomes. Proc Natl Acad Sci USA. 93:1996;10268-10273.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 10268-10273
    • Mushegian, A.R.1    Koonin, E.V.2
  • 26
    • 0026095584 scopus 로고
    • Determination of macromolecular structures from anomalous diffraction of synchrotron radiation
    • Hendrickson W. Determination of macromolecular structures from anomalous diffraction of synchrotron radiation. Science. 254:1995;51-58.
    • (1995) Science , vol.254 , pp. 51-58
    • Hendrickson, W.1
  • 27
    • 0025830469 scopus 로고
    • A method to identify protein sequences that fold into a known three-dimensional structure
    • Bowie J.U., Luthy R., Eisenberg D. A method to identify protein sequences that fold into a known three-dimensional structure. Science. 259:1991;164-170.
    • (1991) Science , vol.259 , pp. 164-170
    • Bowie, J.U.1    Luthy, R.2    Eisenberg, D.3
  • 28
    • 0026690571 scopus 로고
    • A new approach to protein fold recognition
    • Jones D.T., Taylor W.R., Thornton J.M. A new approach to protein fold recognition. Nature. 358:1992;86-89.
    • (1992) Nature , vol.358 , pp. 86-89
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 29
    • 0033435204 scopus 로고    scopus 로고
    • Detection of protein fold similarity based on correlation of amino acid properties
    • Grigoriev I., Kim S-H. Detection of protein fold similarity based on correlation of amino acid properties. Proc Natl Acad Sci USA. 96:1999;14318-14323.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 14318-14323
    • Grigoriev, I.1    Kim, S.-H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.