-
1
-
-
0031708266
-
Electrostatics and the selectivity of ligand-gated ion channels
-
C. Adcock G.R. Smith M.S.P. Sansom Electrostatics and the selectivity of ligand-gated ion channels Biophys. J. 75 1998 1211 1222
-
(1998)
Biophys. J.
, vol.75
, pp. 1211-1222
-
-
Adcock, C.1
Smith, G.R.2
Sansom, M.S.P.3
-
3
-
-
0033073762
-
The influenza virus M2 ion channel protein: probing the structure of the transmembrane domain in intact cells by using engineered disulfide cross-linking
-
C.M. Bauer L.H. Pinto T.A. Cross R.A. Lamb The influenza virus M2 ion channel protein: probing the structure of the transmembrane domain in intact cells by using engineered disulfide cross-linking Virology 254 1999 196 209
-
(1999)
Virology
, vol.254
, pp. 196-209
-
-
Bauer, C.M.1
Pinto, L.H.2
Cross, T.A.3
Lamb, R.A.4
-
4
-
-
0030733344
-
Structure and dynamics of an amphiphilic peptide in a lipid bilayer: a molecular dynamics study
-
K. Belohorcova J.H. Davis T.B. Woolf B. Roux Structure and dynamics of an amphiphilic peptide in a lipid bilayer: a molecular dynamics study Biophys. J. 73 1997 3039 3055
-
(1997)
Biophys. J.
, vol.73
, pp. 3039-3055
-
-
Belohorcova, K.1
Davis, J.H.2
Woolf, T.B.3
Roux, B.4
-
8
-
-
0030999097
-
Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidycholine at full hydration, constant pressure and constant temperature
-
O. Berger O. Edholm F. Jahnig Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidycholine at full hydration, constant pressure and constant temperature Biophys. J. 72 1997 2002 2013
-
(1997)
Biophys. J.
, vol.72
, pp. 2002-2013
-
-
Berger, O.1
Edholm, O.2
Jahnig, F.3
-
10
-
-
0003769049
-
X-PLOR, Version 3.1. A System for X-Ray Crystallography and NMR.
-
A.T. Brünger X-PLOR, Version 3.1. A System for X-Ray Crystallography and NMR. 1992 Yale University Press New Haven, CT
-
(1992)
-
-
Brünger, A.T.1
-
11
-
-
85030359468
-
Crystallography and NMR system: a new software system for macromolecular structure determination
-
A.T. Brünger P. Adams G. Clore W. Gros R. Grosse-Kunstleve J. Jiang J. Kuszewski M. Nilges N. Pannu R. Read L. Rice T. Simonson G. Warren Crystallography and NMR system: a new software system for macromolecular structure determination Acta Crystallog. D 1999
-
(1999)
Acta Crystallog. D
-
-
Brünger, A.T.1
Adams, P.2
Clore, G.3
Gros, W.4
Grosse-Kunstleve, R.5
Jiang, J.6
Kuszewski, J.7
Nilges, M.8
Pannu, N.9
Read, R.10
Rice, L.11
Simonson, T.12
Warren, G.13
-
12
-
-
0032545321
-
Structure of the MscL homolog from Mycobacterium tuberculosis: a gated mechanosensitive ion channel
-
G. Chang R.H. Spencer A.T. Lee M.T. Barclay D.C. Rees Structure of the MscL homolog from Mycobacterium tuberculosis: a gated mechanosensitive ion channel Science 282 1998 2220 2226
-
(1998)
Science
, vol.282
, pp. 2220-2226
-
-
Chang, G.1
Spencer, R.H.2
Lee, A.T.3
Barclay, M.T.4
Rees, D.C.5
-
13
-
-
0029816765
-
Selective proton permeability and pH regulation of the influenza virus M2 channel expressed in mouse erythroleukaemia cells
-
I.V. Chizhmakov F.M. Geraghty D.C. Ogden A. Hayhurst M. Antoniou A.J. Hay Selective proton permeability and pH regulation of the influenza virus M2 channel expressed in mouse erythroleukaemia cells J. Physiol. (Lond.) 494 1996 329 336
-
(1996)
J. Physiol. (Lond.)
, vol.494
, pp. 329-336
-
-
Chizhmakov, I.V.1
Geraghty, F.M.2
Ogden, D.C.3
Hayhurst, A.4
Antoniou, M.5
Hay, A.J.6
-
16
-
-
0032478818
-
The structure of the potassium channel: molecular basis of K+ conduction and selectivity
-
+ conduction and selectivity Science 280 1998 69 77
-
(1998)
Science
, vol.280
, pp. 69-77
-
-
Doyle, D.A.1
Cabral, J.M.2
Pfuetzner, R.A.3
Kuo, A.4
Gulbis, J.M.5
Cohen, S.L.6
Cahit, B.T.7
MacKinnon, R.8
-
17
-
-
0026785994
-
The transmembrane domain of influenza A M2 protein forms amantadine-sensitive proton channels in planar lipid bilayers
-
K.C. Duff R.H. Ashley The transmembrane domain of influenza A M2 protein forms amantadine-sensitive proton channels in planar lipid bilayers Virology 190 1992 485 489
-
(1992)
Virology
, vol.190
, pp. 485-489
-
-
Duff, K.C.1
Ashley, R.H.2
-
18
-
-
0026745087
-
The secondary structure of influenza A M2 transmembrane domain
-
K.C. Duff S.M. Kelly N.C. Price J.P. Bradshaw The secondary structure of influenza A M2 transmembrane domain FEBS Lett. 311 1992 256 258
-
(1992)
FEBS Lett.
, vol.311
, pp. 256-258
-
-
Duff, K.C.1
Kelly, S.M.2
Price, N.C.3
Bradshaw, J.P.4
-
19
-
-
0029026347
-
Structure and fluctuations of bacteriorhodopsin in the purple membrane: a molecular dynamics study
-
O. Edholm O. Berger F. Jähnig Structure and fluctuations of bacteriorhodopsin in the purple membrane: a molecular dynamics study J. Mol. Biol. 250 1995 94 111
-
(1995)
J. Mol. Biol.
, vol.250
, pp. 94-111
-
-
Edholm, O.1
Berger, O.2
Jähnig, F.3
-
20
-
-
0000750272
-
Structure and dynamics of self-assembling peptide nanotubes and the channel-mediated water organization and self-diffusion. A molecular dynamics study
-
M. Engels D. Bashford M.R. Ghadiri Structure and dynamics of self-assembling peptide nanotubes and the channel-mediated water organization and self-diffusion. A molecular dynamics study J. Am. Chem. Soc. 117 1995 9151 9158
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 9151-9158
-
-
Engels, M.1
Bashford, D.2
Ghadiri, M.R.3
-
22
-
-
0032992048
-
Defining the transmembrane helix of M2 protein from influenza A by molecular dynamics simulations in a lipid bilayer
-
L.R. Forrest D.P. Tieleman M.S.P. Sansom Defining the transmembrane helix of M2 protein from influenza A by molecular dynamics simulations in a lipid bilayer Biophys J. 76 1999 1886 1896
-
(1999)
Biophys J.
, vol.76
, pp. 1886-1896
-
-
Forrest, L.R.1
Tieleman, D.P.2
Sansom, M.S.P.3
-
23
-
-
0000308038
-
Time-resolved dynamics of proton transfer in proteinous systems
-
M. Gutman E. Nachliel Time-resolved dynamics of proton transfer in proteinous systems Annu. Rev. Phys. Chem. 48 1997 329 356
-
(1997)
Annu. Rev. Phys. Chem.
, vol.48
, pp. 329-356
-
-
Gutman, M.1
Nachliel, E.2
-
26
-
-
0003443746
-
Ionic Channels of Excitable Membranes
-
B. Hille Ionic Channels of Excitable Membranes 2nd Ed. 1992 Sinauer Associates Sunderland, MA
-
(1992)
-
-
Hille, B.1
-
28
-
-
0030777711
-
Transmembrane four-helix bundle of influenza A M2 protein channel: structural implications from helix tilt and orientation
-
F.A. Kovacs T.A. Cross Transmembrane four-helix bundle of influenza A M2 protein channel: structural implications from helix tilt and orientation Biophys. J. 73 1997 2511 2517
-
(1997)
Biophys. J.
, vol.73
, pp. 2511-2517
-
-
Kovacs, F.A.1
Cross, T.A.2
-
29
-
-
4243801030
-
Refinement of a structural model of the M2 ion channel from influenza A
-
F.A. Kovacs Z. Song J. Wang T.A. Cross Refinement of a structural model of the M2 ion channel from influenza A Biophys. J. 76 1999 A126
-
(1999)
Biophys. J.
, vol.76
, pp. A126
-
-
Kovacs, F.A.1
Song, Z.2
Wang, J.3
Cross, T.A.4
-
30
-
-
0026244229
-
MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures
-
P.J. Kraulis MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures J. Appl. Crystallogr. 24 1991 946 950
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
32
-
-
85120118465
-
-
Newns, D. M., Q. Zhong, P. B. Moore, T. Husslein, P. Pattnaik, and M. L. Klein. 1999. Molecular dynamics study of structure and gating of low molecular weight ion channels. J. Comp. Chem. (in press).
-
-
-
-
33
-
-
0030881872
-
A functionally defined model for the M2 proton channel of influenza A virus suggests a mechanism for its ion selectivity
-
2 proton channel of influenza A virus suggests a mechanism for its ion selectivity Proc. R. Soc. London Ser. A. Natl. Acad. Sci. USA 94 1997 11301 11306
-
(1997)
Proc. R. Soc. London Ser. A. Natl. Acad. Sci. USA
, vol.94
, pp. 11301-11306
-
-
Pinto, L.H.1
Dieckmann, G.R.2
Gandhi, C.S.3
Papworth, C.G.4
Braman, J.5
Shaughnessy, M.A.6
Lear, J.D.7
Lamb, R.A.8
DeGrado, W.F.9
-
34
-
-
0030011088
-
Structure and dynamics of a proton wire: a theoretical study of H+ translocation along the single-file water chain in the gramicidin A channel
-
+ translocation along the single-file water chain in the gramicidin A channel Biophys. J. 71 1996 19 39
-
(1996)
Biophys. J.
, vol.71
, pp. 19-39
-
-
Pomes, R.1
Roux, B.2
-
35
-
-
0031862465
-
Free energy profiles for H+ conduction along hydrogen-bonded chains of water molecules
-
+ conduction along hydrogen-bonded chains of water molecules Biophys. J. 75 1998 33 40
-
(1998)
Biophys. J.
, vol.75
, pp. 33-40
-
-
Pomes, R.1
Roux, B.2
-
36
-
-
0032705715
-
Molecular dynamics of synthetic leucine-serine ion channels in a phospholipid membrane
-
H.S. Randa L.R. Forrest G.A. Voth M.S.P. Sansom Molecular dynamics of synthetic leucine-serine ion channels in a phospholipid membrane Biophys. J. 77 1999 2400 2410
-
(1999)
Biophys. J.
, vol.77
, pp. 2400-2410
-
-
Randa, H.S.1
Forrest, L.R.2
Voth, G.A.3
Sansom, M.S.P.4
-
37
-
-
0029775587
-
Ab initio molecular dynamics study of proton transfer in a polyglycine analog of the ion channel gramicidin A
-
D.E. Sagnella K. Laasonen M.L. Klein Ab initio molecular dynamics study of proton transfer in a polyglycine analog of the ion channel gramicidin A Biophys. J. 71 1996 1172 1178
-
(1996)
Biophys. J.
, vol.71
, pp. 1172-1178
-
-
Sagnella, D.E.1
Laasonen, K.2
Klein, M.L.3
-
39
-
-
0003033511
-
Aggregation of influenza-A M2 transmembrane segment in micelles
-
D. Salom J.D. Lear W.F. DeGrado Aggregation of influenza-A M2 transmembrane segment in micelles Biophys. J. 76 1999 A123
-
(1999)
Biophys. J.
, vol.76
, pp. A123
-
-
Salom, D.1
Lear, J.D.2
DeGrado, W.F.3
-
40
-
-
0032054195
-
Models and simulations of ion channels and related membrane proteins
-
M.S.P. Sansom Models and simulations of ion channels and related membrane proteins Curr. Opin. Struct. Biol. 8 1998 237 244
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 237-244
-
-
Sansom, M.S.P.1
-
41
-
-
0032442211
-
Viral ion channels: molecular modelling and simulation
-
M.S.P. Sansom L.R. Forrest R. Bull Viral ion channels: molecular modelling and simulation Bioessays 20 1998 992 1000
-
(1998)
Bioessays
, vol.20
, pp. 992-1000
-
-
Sansom, M.S.P.1
Forrest, L.R.2
Bull, R.3
-
42
-
-
0030803839
-
The influenza A virus M2 channel: a molecular modelling and simulation study
-
M.S.P. Sansom I.D. Kerr G.R. Smith H.S. Son The influenza A virus M2 channel: a molecular modelling and simulation study Virology 233 1997 163 173
-
(1997)
Virology
, vol.233
, pp. 163-173
-
-
Sansom, M.S.P.1
Kerr, I.D.2
Smith, G.R.3
Son, H.S.4
-
43
-
-
11644271492
-
Multistate empirical valence bond model for proton transport in water
-
U.W. Schmitt G.A. Voth Multistate empirical valence bond model for proton transport in water J. Phys. Chem. B 102 1998 5547 5551
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 5547-5551
-
-
Schmitt, U.W.1
Voth, G.A.2
-
44
-
-
0030966534
-
Transmembrane helix structure, dynamics, and interactions: multi-nanosecond molecular dynamics simulations
-
L. Shen D. Bassolino T. Stouch Transmembrane helix structure, dynamics, and interactions: multi-nanosecond molecular dynamics simulations Biophys. J. 73 1997 3 20
-
(1997)
Biophys. J.
, vol.73
, pp. 3-20
-
-
Shen, L.1
Bassolino, D.2
Stouch, T.3
-
45
-
-
85120147224
-
Substituted cysteine accessibility analysis of the pore structure of the M2 ion channel of influenza A virus
-
J.K. Shuck R.A. Lamb L.H. Pinto Substituted cysteine accessibility analysis of the pore structure of the M2 ion channel of influenza A virus Biophys. J. 76 1999 A147
-
(1999)
Biophys. J.
, vol.76
, pp. A147
-
-
Shuck, J.K.1
Lamb, R.A.2
Pinto, L.H.3
-
46
-
-
0031042584
-
A novel method for structure-based prediction of ion channel conductance properties
-
O.S. Smart J. Breed G.R. Smith M.S.P. Sansom A novel method for structure-based prediction of ion channel conductance properties Biophys. J. 72 1997 1109 1126
-
(1997)
Biophys. J.
, vol.72
, pp. 1109-1126
-
-
Smart, O.S.1
Breed, J.2
Smith, G.R.3
Sansom, M.S.P.4
-
48
-
-
84910987798
-
Biochemistry. W. H.
-
L. Stryer Biochemistry. W. H. 1988 Freeman and Co New York
-
(1988)
-
-
Stryer, L.1
-
49
-
-
0000112789
-
Molecular dynamics simulations of a fully hydrated dipalmitoylphosphatidycholine bilayer with different macroscopic boundary conditions and parameters
-
D.P. Tieleman H.J.C. Berendsen Molecular dynamics simulations of a fully hydrated dipalmitoylphosphatidycholine bilayer with different macroscopic boundary conditions and parameters J. Chem. Phys. 105 1996 4871 4880
-
(1996)
J. Chem. Phys.
, vol.105
, pp. 4871-4880
-
-
Tieleman, D.P.1
Berendsen, H.J.C.2
-
50
-
-
0031860932
-
A molecular dynamics study of the pores formed by E. coli OmpF porin in a fully hydrated POPE bilayer
-
D.P. Tieleman H.J.C. Berendsen A molecular dynamics study of the pores formed by E. coli OmpF porin in a fully hydrated POPE bilayer Biophys. J. 74 1998 2786 2801
-
(1998)
Biophys. J.
, vol.74
, pp. 2786-2801
-
-
Tieleman, D.P.1
Berendsen, H.J.C.2
-
51
-
-
0033035249
-
An alamethicin channel in a lipid bilayer: molecular dynamics simulations
-
D.P. Tieleman H.J.C. Berendsen M.S.P. Sansom An alamethicin channel in a lipid bilayer: molecular dynamics simulations Biophys. J. 76 1999 1757 1769
-
(1999)
Biophys. J.
, vol.76
, pp. 1757-1769
-
-
Tieleman, D.P.1
Berendsen, H.J.C.2
Sansom, M.S.P.3
-
52
-
-
0031438285
-
A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems
-
D.P. Tieleman S.J. Marrink H.J.C. Berendsen A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems Biochim. Biophys. Acta 1331 1997 235 270
-
(1997)
Biochim. Biophys. Acta
, vol.1331
, pp. 235-270
-
-
Tieleman, D.P.1
Marrink, S.J.2
Berendsen, H.J.C.3
-
53
-
-
0032951553
-
Alamethicin helices in a bilayer and in solution: molecular dynamics simulations
-
D.P. Tieleman M.S.P. Sansom H.J.C. Berendsen Alamethicin helices in a bilayer and in solution: molecular dynamics simulations Biophys. J. 76 1999 40 49
-
(1999)
Biophys. J.
, vol.76
, pp. 40-49
-
-
Tieleman, D.P.1
Sansom, M.S.P.2
Berendsen, H.J.C.3
-
56
-
-
0031954925
-
Genome-wide analysis of integral membrane proteins from eubacterial, archean, and eukaryotic organisms
-
E. Wallin G. von Heijne Genome-wide analysis of integral membrane proteins from eubacterial, archean, and eukaryotic organisms Protein Sci. 7 1998 1029 1038
-
(1998)
Protein Sci.
, vol.7
, pp. 1029-1038
-
-
Wallin, E.1
von Heijne, G.2
-
57
-
-
0028980598
-
Activation of the M2 ion channel of influenza virus: a role for the transmembrane domain histidine residue
-
C. Wang R.A. Lamb L.H. Pinto Activation of the M2 ion channel of influenza virus: a role for the transmembrane domain histidine residue Biophys. J. 69 1995 1363 1371
-
(1995)
Biophys. J.
, vol.69
, pp. 1363-1371
-
-
Wang, C.1
Lamb, R.A.2
Pinto, L.H.3
-
58
-
-
0027185716
-
Ion channel activity of influenza A virus M2 protein: characterization of the amantadine block
-
2 protein: characterization of the amantadine block J. Virol. 67 1993 5585 5594
-
(1993)
J. Virol.
, vol.67
, pp. 5585-5594
-
-
Wang, C.1
Takeuchi, K.2
Pinto, L.H.3
Lamb, R.A.4
-
59
-
-
0032586777
-
Simplified methods for pK(a) and acid pH-dependent stability estimation in proteins: removing dielectric and counterion boundaries
-
J. Warwicker Simplified methods for pK(a) and acid pH-dependent stability estimation in proteins: removing dielectric and counterion boundaries Protein Sci. 8 1999 418 425
-
(1999)
Protein Sci.
, vol.8
, pp. 418-425
-
-
Warwicker, J.1
-
60
-
-
0030731888
-
Molecular dynamics of individual α-helices of bacteriorhodopsin in dimyristoyl phosphatidylcholine. I. Structure and dynamics
-
T.B. Woolf Molecular dynamics of individual α -helices of bacteriorhodopsin in dimyristoyl phosphatidylcholine. I. Structure and dynamics Biophys. J. 73 1997 2376 2392
-
(1997)
Biophys. J.
, vol.73
, pp. 2376-2392
-
-
Woolf, T.B.1
|