Transposition in Lactobacillus sakei: Inactivation of a second lactocin S operon by the insertion of IS1520, a new member of the IS3 family of insertion sequences

Microbiology

Volumn 146, Issue 5, 2000, Pages 1163-1169

  Skaugen, Morten ^a   Nes, Ingolf F ^a  

^a NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

Author keywords

Insertion sequence; Lantibiotic; Transposition

Indexed keywords

BACTERIOCIN; LACTOCIN S; REPETITIVE DNA;

ARTICLE; CONTROLLED STUDY; DNA SEQUENCE; DNA TRANSPOSITION; GENE INACTIVATION; GENE INSERTION SEQUENCE; LACTOBACILLUS SAKEI; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; OPERON; PRIORITY JOURNAL;

LACTOBACILLUS SAKEI; POSIBACTERIA; PROKARYOTA;

EID: 0034024616     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/00221287-146-5-1163     Document Type: Article

References (33)

1. Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1990). Basic local alignment search tool. J Mol Biol 215, 403-410.
2. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
3. Atkins, J. F., Weiss, R. B. & Gesteland, R. F. (1990). Ribosome gymnastics - degree of difficulty 9·5, style 10·0. Cell 62, 413-423.
4. Birnboim, H. C. & Doly, J. (1979). A rapid alkaline extraction procedure for screening recomhinant plasmid DNA. Nucleic Acids Res 7, 1513-1523.
5. Chandler, M. & Fayet, O. (1993). Translational frameshifting in the control of transposition in bacteria. Mol Microbiol 7, 497-503.
6. Church, G. M. & Gilbert, W. (1984). Genomic sequencing. Proc Natl Acad Sci USA 81, 1991-1995.
7. Craig, N. L. (1997). Target site selection in transposition. Annu Rev Biochem 66, 437-474.
8. Doak, T. G., Doerder, F. P., Jahn, C. L. & Herrick, G. (1994). A proposed superfamily of transposase genes: transposon-like elements in ciliated protozoa and a common "D35E" motif. Proc Natl Acad Sci USA 91, 942-946.
9. Dower, W. J., Miller, J. F. & Ragsdale, C. W. (1988). High efficiency transformation of E. coli by high voltage electroporation. Nucleic Acids Res 16, 6127-6145.
10. Fayet, O., Ramond, P., Polard, P., Prére, M. F. & Chandler, M. (1990). Functional similarities between retroviruses and the IS3 family of bacterial insertion sequences? Mol Microbiol 4, 1771-1777.
11. Haren, L., Polard, P., Ton-Hoang, B. & Chandler, M. (1998). Multiple oligomerisation domains in the IS911 transposase: a leucine zipper motif is essential for activity. J Mol Biol 283, 29-41.
12. Hu, S. T., Lee, L. C. & Lei, G. S. (1996). Detection of an IS2-encoded 46-kilodalton protein capable of binding terminal repeats of IS2. J Bacteriol 178, 5652-5659.
13. Jacks, T., Madhani, H. D., Masiarz, F. R. & Varmus, H. E. (1988). Signals for ribosomal frameshifting in the Rous sarcoma virus gag-pol region. Cell 55, 447-458.
14. Kandler, O. & Weiss, N. (1986). Regular, nonsporing Gram-positive rods. In Bergey's Manual of Systematic Bacteriology, pp. 1208-1260. Edited by P. A. Sneath, N. S. Mair, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins.
15. Lei, G. S. & Hu, S. T. (1997). Functional domains of the InsA protein of IS2. J Bacteriol 179, 6238-624.5.
16. Mahillon, J. & Chandler, M. (1998). Insertion sequences. Microbiol Mol Biol Rev 62, 725.
17. Mørtvedt, C. I. & Nes, I. F. (1990). Plasmid-associated bacteriocin production by a Lactobacillus sake strain. J Gen Microbiol 136, 1601-1607.
18. Mørtvedt, C. I., Nissen-Meyer, J., Sletten, K. & Nes, I. F. (1991). Purification and amino acid sequence of lactocin S, a bacteriocin produced by Lactobacillus sake L45. Appl Environ Microbiol 57, 1829-1834.
19. Polard, P., Prére, M. F., Chandler, M. & Fayet O. (1991). Programmed translational frameshifting and initiation at an AUU codon in gene expression of bacterial insertion sequence IS911. J Mol Biol 222, 465-477.
20. Polard, P., Prére, M. F., Fayet, O. & Chandler, M. (1992). Transposase-induced excision and circularization of the bacterial insertion sequence IS911. EMBO J 11, 5079-5090.
21. Rettberg, C. C., Prére, M. F., Gesteland, R. F., Atkins, J. F. & Fayet, O. (1999). A three-way junction and constituent stem-loops as the stimulator for programmed - 1 frameshifting in bacterial insertion sequence IS911. J Mol Biol 286, 1365-1378.
22. Schnell, N., Entian, K.-D., Schneider, U., Götz, F., Zähner, H., Kellner, R. & Jung, G. (1988). Prepeptide sequence of epidermin, a ribosomally synthesized antibiotic with four sulphide-rings. Nature 333, 276-278.
23. Sekine, Y., Eisaki, N. & Ohtsubo, E. (1994). Translational control in production of transposase and in transposition of insertion sequence IS3. J Mol Biol 235, 1406-1420.
24. Shimizu-Kadota, M., Kiwaki, M., Hirokawa, H. & Tsuchida, N. (1985). ISL1: a new transposable element in Lactobacillus casei. Mol Gen Genet 200, 193-198.
25. Skaugen, M. & Nes, I. F. (1994). Transposition in Lactobacillus sake and its abolition of lactocin S production by insertion of IS1163, a new member of the IS3 family. Appl Environ Microbiol 60, 2818-2825.
26. Skaugen, M., Nissen-Meyer, J., Jung, G., Stefanovic, S., Sletten, K., Abildgaard, C. I. M. & Nes, I. F. (1994). In vivo conversion of L-serine to D-alanine in a ribosomally synthesized polypeptide. J Biol Chem 269, 27183-27185.
27. Skaugen, M., Abildgaard, C. I. M. & Nes, I. F. (1997). Organization and expression of a gene cluster involved in the biosynthesis of the lantibiotic lactocin S. Mol Gen Genet 253, 674-686.
28. Sulavik, M. C. & Clewell, D. B. (1996). Rgg is a positive transcriptional regulator of the Streptococcus gordonii gtfG gene. J Bacteriol 178, 5826-5830.
29. Sulavik, M. C., Tardif, G. & Clewell, D. B. (1992). Identification of a gene, rgg, which regulates expression of glucosyltransferase and influences the Spp phenotypc of Streptococcus gordonii challis. J Bacteriol 174, 3577-3586.
30. Ton-Hoang, B., Betermier, M., Polard, P. & Chandler, M. (1997). Assembly of a strong promoter following IS911 circularization and the role of circles in transposition. EMBO J 16, 3357-3371.
31. Ton-Hoang. B., Polard, P. & Chandler, M. (1998). Efficient transposition of IS911 circles in vitro. EMBO J 17, 1169-1181.
32. Vögele, K., Schwartz, E., Welz, C., Schiltz, E. & Rak, B. (1991). High-level ribosomal frameshifting directs the synthesis of IS150 gene products. Nucleic Acids Res 19, 4377-4385.
33. Walker, D. C. & Klaenhammer, T. R. (1994). Isolation of a novel IS3 group insertion element and construction of an integration vector for Lactobacillus spp. J Bacteriol 176, 5330-5340.