Back to the roots of a new exon - The molecular archaeology of a SP100 splice variant

Genomics

Volumn 63, Issue 1, 2000, Pages 117-122

  Rogalla, Piere ^a   Kazmierczak, Bernd ^a   Flohr, Aljoscha M ^a   Hauke, Sven ^a   Bullerdiek, Jörn ^a  

^a UNIVERSITY OF BREMEN   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA;

AMINO ACID SEQUENCE; ANIMAL CELL; ARTICLE; DNA SEQUENCE; EVOLUTION; EXON; GENE AMPLIFICATION; GENOME; HUMAN; HUMAN CELL; MODEL; MOLECULAR BIOLOGY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIMATE; PRIORITY JOURNAL; PSEUDOGENE; SEQUENCE ANALYSIS;

EID: 0033995607     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1999.6008     Document Type: Article

References (21)

1. Bustin M., Lehn D. A., Landsman D. Structural features of the HMG chromosomal proteins and their genes. Biochim. Biophys. Acta. 1049:1990;231-243.
2. Bustin M., Reeves R. High-mobility-group chromosomal proteins: Architectural components that facilitate chromatin function. Progr. Nucleic Acids Res. Mol. Biol. 54:1996;35-100.
3. Gilbert W. Why genes in pieces. Nature. 271:1978;501.
4. Gilbert W., De Souza S. J., Long M. Origin of genes. Proc. Natl. Acad. Sci. USA. 94:1997;7698.
5. Guldner H. H., Szostecki C., Schröder P., Matschl U., Jensen K., Lüders C., Will H., Sternsdorf T. Splice variants of the nuclear dot-associated Sp100 protein contain homologies to HMG-1 and a human nuclear phosphoprotein-box motif. J. Cell Sci. 112:1999;733-747.
6. Inoue H., Nojima H., Okayama H. High efficiency transformation of Escherichia coli with plasmids. Gene. 96:1990;23-28.
7. Jantzen H. J., Admon A., Bell S. P., Tjian R. Nucleolar transcription factor hUBF contains a DNA-binding motif with homology to HMG proteins. Nature. 344:1990;830-836.
8. Landsman D., Bustin M. A signature for the HMG-1 box DNA-binding proteins. BioEssays. 15:1993;539-546.
9. Long M., Langley C. H. Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila. Science. 260:1993;91-95.
10. Moran J. V., DeBerardinis R. J., Kazazian H. H. Jr. Exon shuffling by L1 retrotransposition. Science. 283:1999;1530.
11. Onate S. A., Prendergast P., Wagner J. P., Nissen M., Reeves R., Pettijohn D. E., Edwards D. P. The DNA-bending protein HMG-1 enhances progesterone receptor binding to its target DNA sequences. Mol. Cell. Biol. 14:1994;3376-3391.
12. Reeck G. R., Isackson P. J., Teller D. C. Domain structure in high molecular weight high mobility group nonhistone chromatin proteins. Nature. 300:1982;76-78.
13. Rogalla P., Rohen C., Hennig Y., Deichert U., Bonk U., Bullerdiek J. Telomere repeat fragment sizes do not limit the growth potential of uterine leiomyomas. Biochem. Biophys. Res. Commun. 211:1995;175-182.
14. Rogalla P., Borda Z., Meyer-Bolte K., Tran K. H., Hauke S., Nimzyk R., Bullerdiek J. Mapping and molecular characterization of five HMG1-related DNA sequences. Cytogenet. Cell. Genet. 83:1998;124-129.
15. Seeler J. S., Marchio A., Sitterlin D., Transy C., Dejean A. Interaction of SP100 with HP1 proteins: A link between the promyelocytic leukemia-associated nuclear bodies and the chromatin compartment. Proc. Natl. Acad. Sci. USA. 95:1998;7316-7321.
16. Sinclair A. H., Berta P., Palmer M. S., Hawkins J. R., Griffiths B. L., Smith M. J., Foster J. W., Frischauf A. M., Lovell-Badge R., Goodfellow P. N. A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif. Nature. 346:1990;240-244.
17. Stros M., Dixon G. H. A retropseudogene for non-histone chromosomal protein HMG-1. Biochim. Biophys. Acta. 1172:1993;231-235.
18. Travis A., Amsterdam A., Belanger C., Grosschedl R. LEF-1, a gene encoding a lymphoid-specific with protein, an HMG domain, regulates T-cell receptor α enhancer function. Genes Dev. 5:1991;880-894.
19. Vanin E. F. Processed pseudogenes: Characteristics and evolution. Annu. Rev. Genet. 19:1985;253-272.
20. Wen L., Huang J. K., Johnson B. H., Reeck G. R. A human placental DNA that encodes nonhistone chromosomal protein HMG-1. Nucleic Acids Res. 17:1989;1197-1214.
21. Xiang Y. Y., Wang D. Y., Tanaka M., Suzuki M., Kiyokawa E., Igarashi H., Naito Y., Shen Q., Sugimura H. Expression of high-mobility group-1 mRNA in human gastrointestinal adenocarcinoma and corresponding non-cancerous mucosa. Int. J. Cancer. 74:1997;1-6.