Melting of cross-linked dna iv. methods for computer modeling of total influence on dna melting of monofunctional adducts, intrastrand and interstrand cross-links formed by molecules of an antitumor drug

Journal of Biomolecular Structure and Dynamics

Volumn 17, Issue 4, 2000, Pages 697-711

  Lando, Dmitri Y ^a   Fridman, Alexander S ^a   Haroutiunian, Samvel G ^b   Benight, Albert S ^c   Collery, Philippe ^d  

^a INSTITUTE OF BIOORGANIC CHEMISTRY   (Belarus)

^b YEREVAN STATE UNIVERSITY   (Armenia)

^c UNIVERSITY OF ILLINOIS AT CHICAGO   (United States)

^d Research Institute on Metal Ions   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ANTINEOPLASTIC AGENT; CARBOPLATIN; CHLORMETHINE DERIVATIVE; CISPLATIN; DAUNORUBICIN; DOUBLE STRANDED DNA; DOXORUBICIN; MITOMYCIN C; OXALIPLATIN; RUTHENIUM DERIVATIVE;

ARTICLE; COMPUTER MODEL; DNA ADDUCT; DNA CROSS LINKING; DNA DRUG COMPLEX; DNA HELIX; MOLECULAR INTERACTION; PRIORITY JOURNAL;

EID: 0033970179     PISSN: 07391102     EISSN: 15380254     Source Type: Journal    
DOI: 10.1080/07391102.2000.10506560     Document Type: Article

References (51)

1. Sherman, S. E., and Lippard, S. J., 1987. Chemical Reviews, 87:1153–1181.
2. Komess, K. M., and Lippard, S. J., 1993. Molecular Aspects of Anticancer Drug-DNA Interactions, 1:134–168.
3. Leng, M., and Brabec, V., 1994. DNA Adducts:Identification and Biological Significance,:339–348.
4. Coluccia, M., Boccarelli, A., Cermelli, C., Portolani, M., and Natile, G., 1995. Metal-Based Drugs, 2:249–256.
5. Hongo, A., Seki, S., Akiyama, K., and Kudo, T., 1994. Int. J. Biochem, 26:1009–1016.
6. Novakova, O., Vrana, O., Kiseleva, V. I., and Brabec, V., 1995. Eur. J. Biochem, 228:616–624.
7. Farrell, N., Qu, Y., Feng, L., and Van Houten, B., 1990. Biochemistry, 29:9522–9531.
8. Farrell, N., 1995. Comments Inorg. Chem., 16:373–389.
9. Kasparkova, J., Mellish, K. J., Qu, Y., Brabec, V., and Farrell, N., 1996. Biochemistry, 35:16705–16713.
10. Grover, N., Welch, T. W., Fairley, T. A., Cory, M., and Thorp, H. H., 1994. Inorg. Chem., 33:3544–3548.
11. van Vliet, P. M., Toekimin, S. M.S., Haasnoot, J. G., Reedijk, J., Novakova, O., Vrana, O., and Brabec, V., 1995. Inorg. Chim. Acta, 231:57–64.
12. Tomasz, M., 1995. Chemistry & Biology, 2:575–579.
13. Bizanek, R., Chowdary, D., Arai, H., Kasai, M., Hughes, C. S., Sartorelli, A. C., Rockwell, S., and Tomasz, M., 1993. Cancer Res., 53:5127–5134.
14. Cullinane, C., van Rosmalen, A., and Phillips, D. R., 1994. Biochemistry, 33:4632–4638.
15. Skladanowski, A., and Konopa, J., 1994. Biochem. Pharmacol., 47:2269–2278.
16. Kohn, K. W., 1996. Cancer Research, 56:5533–5546.
17. Povirk, L. F., and Shuker, D. E., 1994. Mutation Research, 318:205–226.
18. Millard, J. T., Luedtke, N. W., and Spencer, R. J., 1996. Anti-Cancer Drug Design, 11:485–492.
19. Cimino, G. D., Gamper, H. B., Isaacs, S. T., and Herst, J. E., 1985. Annual Rev. Biochem., 54:1151–1193.
20. Shi, Y., and Hearst, J. E., 1986. Biochemistry, 25:5895–5902.
21. Spielmann, H. P., Chi, D.-Y., Hunt, N. G., Klein, M. P., and Hearst, J. E., 1995. Biochemistry, 34:14801–14814.
22. Millard, J. T., and White, M. M., 1993. Biochemistry, 32:2120–2124.
23. Brabec, V., and Boudny, V., 1994. Metal-Based Drugs, 1:195–200.
24. Brabec, V., Reedijk, Jan, and Leng, Mark. 1992. Biochemistry, 31:12397–12402.
25. Takahara, P. M., Rosenzweig, A. C., Frederick, C. A., and Lippard, S. J., 1995. Nature, 377:649–652.
26. van Boom, S. S.G.E., Yang, D., Reedijk, J., van der Marel, G. A., and Wang, A. H.-J., 1996. J. Biomol. Struct. Dynam., 13:989–998.
27. Coste, F., Malinge, J.-M., Serre, L., Shepard, W., Roth, M., Leng, M., and Zelwer, C., 1999. Nucleic Acids Research, 27:1837–1846.
28. Malinge, J.-M., and Leng, M., 1999. Cisplatin. Chemistry and Biochemistry of a Leading Anticancer Drug,:159–180.
29. Paquet, F., Pérez, C., Leng, M., Lancelot, G., and Malinge, J.-M., 1996. J. Biomol. Struct. Dynam., 14:67–77.
30. Urata, H., Ueno, M., Yamasaki, F., and Akagi, M., 1991. Biochem. Biophys. Res. Com., 175:537–542.
31. Horacek, P., and Drobnik, J., 1971. Biochim. Biophys. Acta, 254:341–347.
32. Hermann, D., Houssier, C., and Guschlbauer, W., 1979. Biochim. Biophys. Acta, 564:456–472.
33. Butour, J. L., and Macquet, J. P., 1981. Biochim. Biophys. Acta, 653:305–315.
34. Haroutiunian, S. G., Bruni, B., Monnanni, R., Orioli, P., and Mangani, S., 1992. Inorg. Chim. Acta., 184:127–133.
35. Narasimhan, V., Malboueuf, B., and Hodil, S. E., 1995. Biochem. Mol. Biol. Int., 37:843–851.
36. Zaludova, R., Wachter, V. K., and Brabec, V., 1996. Biophysical Chemistry, 60:135–142.
37. Natarajan, G., Malathi, R., and Holler, E., 1996. Analytical Biochemistry, 237:152–155.
38. Haroutiunian, S. G., Dalian, E. B., Morozov, V. F., Mamasachlissov, Eu.Sh., Shahinian, M. S., Akhrem, A. A., Lando, D. Y., Messori, L., and Orioli, P., 1998. Inorganica Chimica Acta, 275–276:510–514.
39. Poklar, N., Pilch, D. S., Lippard, S. J., Redding, E. A., Dunham, S. U., and Breslauer, K. J., 1996. Proc. Natl. Acad. Sci. USA, 93:7606–7611.
40. Urata, H., Fujikawa, K., Tamura, M., and Akagi, M., 1990. J. Amer. Chem. Soc., 112:8611–8612.
41. Osborne, S. E., Volker, J., Stevens, S. Y., Breslauer, K. J., and Glick, G. D., 1996. J. Am. Chem. Soc., 118:11993–12003.
42. Warren, A. J., and Hamilton, J. W., 1996. Chem. Res. Toxicol., 9:1063–1071.
43. Sastry, M., Fiala, R., Lipman, R., Tomasz, M., and Patel, D. J., 1995. J. Mol. Biol., 247:338–359.
44. Breslauer, K. J., 1995. Methods in Enzymology, 258:221–242.
45. Fixman, M., and Freire, J. J., 1977. Biopolymers, 16:2693–2704.
46. Wartell, R. M., and Benight, A. S., 1985. Physics Reports, 126:67–107.
47. Benight, A. S., Gallo, F. J., Paner, T. M., Bishop, K. D., Faldasz, B. D., and Lane, M. J., 1995. Advances in Biophysical Chemistry, 5:1–55.
48. Poland, D., 1974. Biopolymers, 13:1859–1871.
49. Lando, D. Y., 1997. J. Biomol. Struct. Dynam., 15:129–140.
50. Lando, D. Y., Fridman, A. S., Kabak, A. G., and Akhrem, A. A., 1997. J. Biomol. Struct. Dynam., 15:141–150.
51. Lando, D. Y., Fridman, A. S., Krot, V. I., and Akhrem, A. A., 1998. J. Biomol. Struct. Dynam., 16:59–67.