Interaction of the cauliflower mosaic virus coat protein with the pregenomic RNA leader

Journal of Virology

Volumn 74, Issue 5, 2000, Pages 2067-2072

  Guerra Peraza, Orlene ^a,b   De Tapia, Marc ^a,c   Hohn, Thomas ^a   Hemmings Mieszczak, Maja ^a  

^a FRIEDRICH MIESCHER INSTITUTE FOR BIOMEDICAL RESEARCH   (Switzerland)

^b Centro de Bioplantas   (Cuba)

^c UMR 7519 CNRS 21   (France)

Author keywords

[No Author keywords available]

Indexed keywords

COAT PROTEIN; RNA; VIRUS DNA; VIRUS PROTEIN; ZINC FINGER PROTEIN;

ARTICLE; CAULIFLOWER MOSAIC VIRUS; GENE MUTATION; NONHUMAN; OPEN READING FRAME; PLANT VIRUS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN RNA BINDING; SITE DIRECTED MUTAGENESIS; VIRUS GENOME;

5' UNTRANSLATED REGIONS; BASE SEQUENCE; CAPSID; CAULIMOVIRUS; DNA PRIMERS; MOLECULAR SEQUENCE DATA; MUTATION; NUCLEIC ACID CONFORMATION; NUCLEIC ACID HYBRIDIZATION; OPEN READING FRAMES; RNA, MESSENGER; RNA, SPLICED LEADER; RNA, VIRAL; YEASTS; ZINC FINGERS;

EID: 0033962105     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.74.5.2067-2072.2000     Document Type: Article

References (49)

1. Aldovini, A., and R. A. Young. 1990. Mutations of RNA and protein sequences involved in human immunodeficiency virus type 1 packaging result in production of noninfectious virus. J. Virol. 64:1920-1926.
2. Bacharach, E., and S. P. Goff. 1998. Binding of the human immunodeficiency virus type 1 Gag protein to the viral RNA encapsidation signal in the yeast three-hybrid system. J. Virol. 72:6944-6949.
3. Barat, C., O. Schatz, S. Le Grice, and J. L. Darlix. 1993. Analysis of the interactions of HIV1 replication primer tRNA(Lys, 3) with nucleocapsid protein and reverse transcriptase. J. Mol. Biol. 231:185-190.
4. Bartel, P. L., C.-T. Chien, R. Sternglanz, and S. Fields. 1993. Using the two-hybrid system to detect protein-protein interactions, p. 153-179. In D. A. Hartley (ed.), Cellular interactions in development: a practical approach. Oxford University Press, Oxford, United Kingdom.
5. Bartenschlager, R., and H. Schaller. 1992. Hepadnaviral assembly is initiated by polymerase binding to the encapsidation signal in the viral RNA genome. EMBO J. 9:3413-3420.
6. Berkowitz, R. D., A. Ohagen, S. Hoglund, and S. P. Goff. 1995. Retroviral nucleocapsid domains mediate the specific recognition of genomic viral RNAs by chimeric Gag polyproteins during RNA packaging in vivo. J. Virol. 69:6445-6456.
7. Bonneville, J.-M., J. Fütterer, K. Gordon, T. Hohn, J. Marlinez Izquierdo, P. Pfeiffer, and M. Pietrzak. 1987. The replication cycle of CaMV in relation to other retroid elements: current perspectives. UCLA Symp. Mol. Cell. Biol. 48:267-293.
8. Chang, L.-J., P. Pryciak, D. V. Ganem, and H. E. Varmus. 1989. Biosynthesis of the reverse transcriptase of hepatitis B viruses involves de novo translational initiation not ribosomal frameshifting. Nature 337:364-367.
9. Chapdelaine, Y., and T. Hohn. 1998. The cauliflower mosaic virus capsid protein: assembly and nucleic acid binding in vitro. Virus Genes 17:139-150.
10. Covey, S. N. 1986. Amino acid sequence homology in gag region of reverse transcribing elements and the coat protein gene of cauliflower mosaic virus. Nucleic Acids Res. 14:623-633.
11. De Guzman, R. N., Z. R. Wu, C. C. Stalling, L. Pappalardo, P. N. Borer, and M. F. Summers. 1998. Structure of the HIV-1 nucleocapsid protein hound to the SL3 psi-RNA recognition element. Science 279:384-388.
12. Dupraz, P., S. Oertle, C. Meric, P. Damay, and P. F. Spahr. 1990. Point mutations in the proximal Cys-His box of Rous sarcoma virus nucleocapsid protein. J. Virol. 64:4978-4987.
13. Fütterer, J., J.-M. Bonneville, and T. Hohn. 1990. Cauliflower mosaic virus as a gene expression vector for plants. Physiol. Plant. 79:154-157.
14. Fütterer, J., K. Gordon, J.-M. Bonneville, H. Sanfaçon, B. Pisan, J. Penswick, and T. Hohn. 1988. The leading sequence of caulimovirus large RNA can be folded into a large stem-loop structure. Nucleic Acids Res. 16:8377-8390.
15. Fütterer, J., and T. Hohn. 1987. Involvement of nucleocapsids in reverse transcription - a general phenomenon? Trends Biochem. Sci. 12:92-95.
16. Fütterer, J., Z. Kiss-László, and T. Hohn. 1993. Nonlinear ribosome migration on cauliflower mosaic virus 35S RNA. Cell 73:789-802.
17. Franck, A., H. Guilley, G. Jonard, K. E. Richards, and L, Hirth. 1980. Nucleotide sequence of cauliflower mosaic virus DNA. Cell 21:285-294.
18. Frankel, A. D., and J. A. Young. 1998. HIV-1: fifteen proteins and an RNA. Annu. Rev. Biochem. 67:1-25.
19. Gietz, D., A. St. Jean, R. A. Woods, and R. H. Schiestl. 1992. Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res. 20:1425-1425.
20. Gorelick, R. J., L. E. Henderson, J. P. Hanser, and A. Rein. 1988 Point mutants of Moloney murine leukemia virus that fail to package viral RNA: evidence for specific RNA recognition by a "zinc finger-like" protein sequence. Proc. Natl. Acad. Sci. USA 85:8420-8424.
21. Hay, J. M., M. C. Jones, M. L. Blackebrough, I. Dasgupta, J. W. Davies, and R. Hull. 1991. An analysis of the sequence of an infectious clone of rice tungro bacilliform virus, a plant pararetrovirus. Nucleic Acids Res. 19:2615-2621.
22. Hemmings-Mieszczak, M., G. Steger, and T. Hohn. 1997. Alternative structures of the cauliflower mosaic virus 35 S RNA leader: implications for viral expression and replication. J. Mol. Biol. 267:1075-1088.
23. Hemmings-Mieszczak, M., G. Sieger, and T. Hohn. 1998. Regulation of CaMV 35 S RNA translation is mediated by a stable hairpin in the leader. RNA 4:101-111.
24. Himmelbach, A., Y. Chapdelaine, and T. Hohn. 1996. Interaction between cauliflower mosaic virus inclusion body protein and capsid protein: implications for viral assembly. Virology 217:147-157.
25. Hull, R., and S. N. Covey. 1995. Retroelements: propagation and adaptation. Virus Genes 11:105-118.
26. Ji, H., R. Zhang, L. Lai, and M. Shao. 1996. Solid-phase synthesis, metal binding and folding properties of caulimovirus-related 'zinc finger'. Int. J. Pept. Protein Res. 48:461-464.
27. Kirchherr, D., H. Albrecht, J.-M. Mesnard, and G. Lebeurier. 1988 Expression of the cauliflower mosaic virus capsid gene in vivo. Plant Mol. Biol. 11:271-276.
28. Kiss-László, Z., S. Blanc, and T. Hohn. 1995. Splicing of cauliflower mosaic virus 35S RNA is essential for viral infectivity. EMBO J. 14:3552-3562.
29. Klausner, R. D., T. A. Rouault, and J. B. Harford. 1993. Regulating the fate of mRNA: the control of cellular iron metabolism. Cell 72:19-28.
30. Leclerc, D., L. Burri, A. V. Kajava, J.-L. Mougeot, D. Hess, A. Lustig, G. Kleeman, and T. Hohn. 1998. The open reading frame III of cauliflower mosaic virus forms a tetramer through a N-terminal coiled-coil. J. Biol. Chem. 273:29015-29021.
31. Leclerc, D., Y. Chapdelaine, and T. Hohn. 1999. Nuclear targeting of the cauliflower mosaic virus coat protein. J. Virol. 73:553-560.
32. Linial, M. L. 1999. Foamy viruses are unconventional retroviruses. J. Virol. 73:1747-1755.
33. Martinez-Izquierdo, J., and T. Hohn. 1987. Cauliflower mosaic virus coat protein is phosphorylated in vitro by a virion associated protein kinase. Proc. Natl. Acad. Sci. USA 84:1824-1828.
34. Meric, C., and S. P. Goff. 1989. Characterization of Moloney murine leukemia virus mutants with single-amino-acid substitutions in the Cys-His box of the nucleocapsid protein. J. Virol. 63:1558-1568.
35. Mervis, R. J., N. Ahmad, E. P. Lillehoj, M. G. Raum, F. H. Salazar, H. W. Chan, and S. Venkatesan. 1988. The gag gene products of human immunodeficiency virus type 1: alignment within the gag open reading frame, identification of posttranslational modifications, and evidence for alternative gag precursors. J. Virol. 62:3593-4002.
36. Mesnard, J.-M., and C. Carriere. 1996. Comparison of packaging strategy in retroviruses and pararetroviruses. Virology 213:1-6.
37. Miller, J. H. 1972. A short course in bacterial genetics: experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
38. Pooggin, M. M., J. Fütterer, K. G. Skryabin, and T. Hohn. 1999. A short open reading frame terminating in front of a stable hairpin is conserved feature in pregenomic RNA leaders of plant pararetroviruses. J. Gen. Virol. 80:2217-2228.
39. Pooggin, M. M., T. Hohn, and J. Futterer. 1998. Forced evolution reveals the importance of short open reading frame A and secondary structure in the cauliflower mosaic virus 35S RNA leader. J. Virol. 72:4157-4169.
40. Rothnie, H. M., Y. Chapdelaine, and T. Hohn. 1994. Pararetroviruses and retroviruses: a comparative review of viral structure and gene expression strategies. Adv. Virus Res. 44:1-67.
41. Schlicht, H.-J., J. Salfeld, and H. Schaller. 1989. Synthesis and encapsidation of duck hepatitis B virus reverse transcriptase do not require formation of core-polymerase fusion proteins. Cell 56:85-92.
42. Schmidt-Puchta, W., D. Dominguez, D. Lewetag, and T. Hohn. 1997. Plant ribosome shunting in vitro. Nucleic Acids Res. 25:2854-2860.
43. Schneider, S., M. Buchert, and B. H. Howard. 1996. An in vitro assay of β-galactosidase from yeast. BioTechniques 20:960-962.
44. Scholthof, H. B., F. C. Wu, J. M. Kiernan, and R. J. Shepherd. 1993 The putative zinc finger of a caulimovirus is essential for infectivity but does not influence gene expression. J. Gen. Virol. 74:775-780.
45. Schwartz, M. D., D. Fiore, and A. T. Panganiban. 1997. Distinct functions and requirements for the Cys-His boxes of the human immunodeficiency virus type 1 nucleocapsid protein during RNA encapsidation and replication. J. Virol. 71:9295-9305.
46. SenGupta, D. J., B. Zhang, B. Kraemer, P. Pochart, S. Fields, and M. Wickens. 1996. A three-hybrid system to detect RNA-protein interactions in vivo. Proc. Natl. Acad. Sci. USA 93:8496-8501.
47. Swanstrom, R., and J. W. Wills. 1997. Synthesis, assembly, and processing of viral proteins, p. 263-334. In J. M. Coffin, S. H. Hughes, and H. E. Varmus (ed.), Retroviruses. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
48. Thompson, S. R., and U. Melcher. 1993. Coat protein of cauliflower mosaic virus binds to ssDNA. J. Gen. Virol. 74:1141-1148.
49. Torruella, M., K. Gordon, and T. Hohn. 1989. Cauliflower mosaic virus produces an aspartic proteinase to cleave its polyproteins. EMBO J. 8:2819-2825.