메뉴 건너뛰기




Volumn 23, Issue 2, 2000, Pages 230-237

Identification of enterococci at the species level by sequencing of the genes for D-alanine:D-alanine ligases

Author keywords

Enterococci; Identification; Phylogeny

Indexed keywords

BACTERIAL DNA; DEXTRO ALANINE DEXTRO ALANINE LIGASE;

EID: 0033934785     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0723-2020(00)80009-0     Document Type: Article
Times cited : (29)

References (33)
  • 2
    • 0027451903 scopus 로고
    • Phenotypic identification of the genus Enterococcus and differentiation of phylogenetically distinct enterococcal species and species group
    • DEVRIESE, L. A., POT, B., COLLINS, M. D.: Phenotypic identification of the genus Enterococcus and differentiation of phylogenetically distinct enterococcal species and species group. J. Appl. Bacteriol. 75, 399-408 (1993).
    • (1993) J. Appl. Bacteriol. , vol.75 , pp. 399-408
    • Devriese, L.A.1    Pot, B.2    Collins, M.D.3
  • 3
    • 0027587923 scopus 로고
    • Phenotypic and phylogenic evidence for a close relationship between Lactococcus garvieae and Enterococcus seriolicida
    • DOMENECH, A., PRIETA, J., FERNANDEZ-GARAYZABAL, J. F., COLLINS, M. D., JONES, D., DOMINGUEZ, L.: Phenotypic and phylogenic evidence for a close relationship between Lactococcus garvieae and Enterococcus seriolicida. Microbiologia 9, 63-68 (1993).
    • (1993) Microbiologia , vol.9 , pp. 63-68
    • Domenech, A.1    Prieta, J.2    Fernandez-Garayzabal, J.F.3    Collins, M.D.4    Jones, D.5    Dominguez, L.6
  • 4
    • 0028950023 scopus 로고
    • Detection of glycopeptide resistance genotypes and identification to the species level of clinically relevant enterococci by PCR
    • DUTKA-MALEN, S., EVERS, S., COURVALIN, P.: Detection of glycopeptide resistance genotypes and identification to the species level of clinically relevant enterococci by PCR. J. Clin. Microbiol. 33, 24-27 (1995).
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 24-27
    • Dutka-Malen, S.1    Evers, S.2    Courvalin, P.3
  • 5
    • 0025611885 scopus 로고
    • The VanA glycopeptide resistance protein is related to D-alanine:D-alanine ligase cell-wall biosynthesis enzymes
    • DUTKA-MALEN, S., MOLINAS, C., ARTHUR, M., COURVALIN, P.: The VanA glycopeptide resistance protein is related to D-alanine:D-alanine ligase cell-wall biosynthesis enzymes. Mol. Gen. Genet. 224, 364-372 (1990).
    • (1990) Mol. Gen. Genet. , vol.224 , pp. 364-372
    • Dutka-Malen, S.1    Molinas, C.2    Arthur, M.3    Courvalin, P.4
  • 6
    • 0026522234 scopus 로고
    • Sequence of the vanC gene of Enterococcus gallinarum BM4174 encoding a D-alanine:D-alanine ligase related protein necessary for vancomycin resistance
    • DUTKA-MALEN, S., MOLINAS, C., ARTHUR, M., COURVALIN, P.: Sequence of the vanC gene of Enterococcus gallinarum BM4174 encoding a D-alanine:D-alanine ligase related protein necessary for vancomycin resistance. Gene 112, 53-58 (1992).
    • (1992) Gene , vol.112 , pp. 53-58
    • Dutka-Malen, S.1    Molinas, C.2    Arthur, M.3    Courvalin, P.4
  • 7
    • 0030070537 scopus 로고    scopus 로고
    • Enterococcus seriolicida is a junior synonym of Lactococcus garvieae, a causative agent of septicemia and meningoencephalitis in fish
    • ELDAR, A., GHITTINO, C., ASANTA, L., BOZZETTA, E., GORIA, M., PREARO, M., BERCOVIER, H.: Enterococcus seriolicida is a junior synonym of Lactococcus garvieae, a causative agent of septicemia and meningoencephalitis in fish. Curr. Microbiol. 32, 85-88 (1996).
    • (1996) Curr. Microbiol. , vol.32 , pp. 85-88
    • Eldar, A.1    Ghittino, C.2    Asanta, L.3    Bozzetta, E.4    Goria, M.5    Prearo, M.6    Bercovier, H.7
  • 8
    • 0028982632 scopus 로고
    • Analysis of genes encoding D-alanine:D-alanine related enzymes in Leuconostoc mesenteroides and Lactobacillus spp.
    • ELISHA, B. G., COURVALIN, P.: Analysis of genes encoding D-alanine:D-alanine related enzymes in Leuconostoc mesenteroides and Lactobacillus spp. Gene 152, 79-83 (1995).
    • (1995) Gene , vol.152 , pp. 79-83
    • Elisha, B.G.1    Courvalin, P.2
  • 9
    • 0029996927 scopus 로고    scopus 로고
    • Evolution of structure and substrate specificity in D-alanine:D-alanine ligases and related enzymes
    • EVERS, S., CASADEWALL, B., CHARLES, M., DUTKA-MALEN, S., GALIMAND, M., COURVALIN, P.: Evolution of structure and substrate specificity in D-alanine:D-alanine ligases and related enzymes. J. Mol. Evol. 42, 706-712 (1996).
    • (1996) J. Mol. Evol. , vol.42 , pp. 706-712
    • Evers, S.1    Casadewall, B.2    Charles, M.3    Dutka-Malen, S.4    Galimand, M.5    Courvalin, P.6
  • 10
    • 0029863413 scopus 로고    scopus 로고
    • B two-component regulatory system in Enterococcus faecalis V583
    • B two-component regulatory system in Enterococcus faecalis V583. J. Bacteriol. 178, 1302-1309 (1996).
    • (1996) J. Bacteriol. , vol.178 , pp. 1302-1309
    • Evers, S.1    Courvalin, P.2
  • 11
    • 0001160477 scopus 로고
    • Enterococcus
    • (P. R. MURRAY, E. J. BARON, M. A. PFALLER, F. C. TENOVER, and R. H. YOLKEN eds.) 6th ed., Washington, American Society for Microbiology
    • FACKLAM, R. R., SAHM, D. F.: Enterococcus, pp. 308-314. In: Manual of clinical microbiology (P. R. MURRAY, E. J. BARON, M. A. PFALLER, F. C. TENOVER, and R. H. YOLKEN eds.) 6th ed., Washington, American Society for Microbiology 1995.
    • (1995) Manual of Clinical Microbiology , pp. 308-314
    • Facklam, R.R.1    Sahm, D.F.2
  • 12
    • 0028151598 scopus 로고
    • Vancomycin resistance: Structure of D-alanine:D-alanine ligase at 2.3 Å resolution
    • FAN, C., MOEWS, P. C., WALSH, C. T., KNOX J. R.: Vancomycin resistance: structure of D-alanine:D-alanine ligase at 2.3 Å resolution. Science 266, 439-443 (1994).
    • (1994) Science , vol.266 , pp. 439-443
    • Fan, C.1    Moews, P.C.2    Walsh, C.T.3    Knox, J.R.4
  • 13
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • FELSENSTEIN, J.: Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791 (1985).
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 15
    • 0025025261 scopus 로고
    • Progressive alignment and phylogenetic tree construction of protein sequences
    • FENG, D. F., DOOLITTLE, R. F.: Progressive alignment and phylogenetic tree construction of protein sequences. Methods Enzymol. 183, 375-387 (1990).
    • (1990) Methods Enzymol. , vol.183 , pp. 375-387
    • Feng, D.F.1    Doolittle, R.F.2
  • 17
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specified tree topology
    • FITCH, W.: Toward defining the course of evolution: minimum change for a specified tree topology. Syst. Zool. 20, 406-413 (1971).
    • (1971) Syst. Zool. , vol.20 , pp. 406-413
    • Fitch, W.1
  • 18
    • 0030833814 scopus 로고    scopus 로고
    • Identification of clinically relevant viridans group streptococci to the species level by PCR
    • GARNIER, F., GERBAUD, G., COURVALIN, P., GALIMAND, M.: Identification of clinically relevant viridans group streptococci to the species level by PCR. J. Clin. Microbiol. 35, 2337-2341 (1997).
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 2337-2341
    • Garnier, F.1    Gerbaud, G.2    Courvalin, P.3    Galimand, M.4
  • 19
    • 0025122091 scopus 로고
    • Presence of chromosomal elements resembling the composite structure Tn3701 in streptococci
    • LE BOUGUÉNEC, C., CESPEDES, G., HORAUD, T.: Presence of chromosomal elements resembling the composite structure Tn3701 in streptococci. J. Bacteriol. 172, 727-734 (1990).
    • (1990) J. Bacteriol. , vol.172 , pp. 727-734
    • Le Bouguénec, C.1    Cespedes, G.2    Horaud, T.3
  • 20
    • 0031802335 scopus 로고    scopus 로고
    • Division of the genus Enterococcus into species groups using PCR-based molecular typing methods
    • MONSTEIN, H. J., QUEDNAU, M., SAMUELSSON, A., AHRNE, S., ISAKSSON, B., JONASSON, J.: Division of the genus Enterococcus into species groups using PCR-based molecular typing methods. Microbiol. 144, 1171-1179 (1998).
    • (1998) Microbiol. , vol.144 , pp. 1171-1179
    • Monstein, H.J.1    Quednau, M.2    Samuelsson, A.3    Ahrne, S.4    Isaksson, B.5    Jonasson, J.6
  • 21
    • 0025100795 scopus 로고
    • The life and times of the enterococcus
    • MURRAY, B. E.: The life and times of the enterococcus. Clin. Microbiol. Rev. 3, 46-65 (1990).
    • (1990) Clin. Microbiol. Rev. , vol.3 , pp. 46-65
    • Murray, B.E.1
  • 22
    • 0028071883 scopus 로고
    • Analysis of genes encoding D-alanine:D-alanine ligase related enzymes in Enterococcus casseliflavus and Enterococcus flavescens
    • NAVARRO, F., COURVALIN, P.: Analysis of genes encoding D-alanine:D-alanine ligase related enzymes in Enterococcus casseliflavus and Enterococcus flavescens. Antimicrob. Agents Chemother. 38, 1788-1793 (1994).
    • (1994) Antimicrob. Agents Chemother. , vol.38 , pp. 1788-1793
    • Navarro, F.1    Courvalin, P.2
  • 23
  • 25
    • 0022555367 scopus 로고
    • Further evidence for overlapping transcriptional units in an Escherichia coli cell envelope-cell division gene cluster: DNA sequence and transcriptional organization of the ddl ftsQ region
    • ROBINSON, A. C., KENAN, D. J., SWEENEY, J., DONACHIE, W. D.: Further evidence for overlapping transcriptional units in an Escherichia coli cell envelope-cell division gene cluster: DNA sequence and transcriptional organization of the ddl ftsQ region. J. Bacteriol. 167, 809-817 (1986).
    • (1986) J. Bacteriol. , vol.167 , pp. 809-817
    • Robinson, A.C.1    Kenan, D.J.2    Sweeney, J.3    Donachie, W.D.4
  • 26
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • SAITOU, N., NEI, M.: The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425 (1987).
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 28
    • 0021365987 scopus 로고
    • Transfer of Streptococus faecalis and Streptococus faecium to the genus Enterococcus nom. rev. as Enterococcus faecalis comb. nov. and Enteroccocus faecium comb. nov
    • SCHLEIFER, K. H., KILPPER-BÄLZ, R.: Transfer of Streptococus faecalis and Streptococus faecium to the genus Enterococcus nom. rev. as Enterococcus faecalis comb. nov. and Enteroccocus faecium comb. nov. Int. J. Syst. Bacteriol. 34, 31-34 (1984).
    • (1984) Int. J. Syst. Bacteriol. , vol.34 , pp. 31-34
    • Schleifer, K.H.1    Kilpper-Bälz, R.2
  • 29
    • 0023472534 scopus 로고
    • Molecular and chemotaxonomic approaches to the classification of streptococci, enterococci and lactococci: A review
    • SCHLEIFER, K. H., KILPPER-BALZ, R.: Molecular and chemotaxonomic approaches to the classification of streptococci, enterococci and lactococci: a review. System. Appl. Microbiol. 10, 1-19 (1987).
    • (1987) System. Appl. Microbiol. , vol.10 , pp. 1-19
    • Schleifer, K.H.1    Kilpper-Balz, R.2
  • 30
    • 0030949841 scopus 로고    scopus 로고
    • Species identification of enterococci via intergenic ribosomal PCR
    • TYRELL, G. J., BETHUNE, R. N., WILLEY, B., LOW, D. E.: Species identification of enterococci via intergenic ribosomal PCR. J. Clin. Microbiol. 35, 1054-1060 (1997).
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 1054-1060
    • Tyrell, G.J.1    Bethune, R.N.2    Willey, B.3    Low, D.E.4
  • 31
    • 0025781241 scopus 로고
    • Intragenic relationships of enterococci as determined by reverse sequencing of small subunit rRNA
    • WILLIAMS, A. M., RODRIGUES, U. M., COLLINS, M. D.: Intragenic relationships of enterococci as determined by reverse sequencing of small subunit rRNA. Res. Microbiol. 142, 67-74 (1991).
    • (1991) Res. Microbiol. , vol.142 , pp. 67-74
    • Williams, A.M.1    Rodrigues, U.M.2    Collins, M.D.3
  • 33
    • 0025774861 scopus 로고
    • Existence of two D-alanine:D-alanine ligases in Escherichia coli: Cloning and sequencing of the ddlA gene, and purification and characterization of the DdlA and DdlB enzymes
    • ZAWADZKE, L. E., BUGG, T. D. H., WALSH, C. T.: Existence of two D-alanine:D-alanine ligases in Escherichia coli: cloning and sequencing of the ddlA gene, and purification and characterization of the DdlA and DdlB enzymes. Biochemistry 30, 1673-1682 (1991).
    • (1991) Biochemistry , vol.30 , pp. 1673-1682
    • Zawadzke, L.E.1    Bugg, T.D.H.2    Walsh, C.T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.