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Volumn 42, Issue 6, 1996, Pages 706-712

Evolution of structure and substrate specificity in D-alanine:D-alanine ligases and related enzymes

Author keywords

Antibiotic resistance; Cell wall synthesis; Enterococcus; Glycopeptides; Peptidoglycan

Indexed keywords

BACTERIAL ENZYME; GLYCOPEPTIDE; LIGASE; PEPTIDOGLYCAN; RNA 16S;

EID: 0029996927     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02338803     Document Type: Article
Times cited : (71)

References (31)
  • 2
    • 0028286852 scopus 로고
    • Modification of peptidoglycan precursors is a common feature of the low-level vancomycin-resistant VANB-type Enterococcus D366 and of the naturally glycopeptide-resistant species Lactobacillus casei, Pediococcus pentosaceus, Leuconostoc mesenteroides, and Enterococcus gallinarum
    • Billot-Klein D, Gutmann L, Sablé S, Guittet E, van Heijenoort J (1994) Modification of peptidoglycan precursors is a common feature of the low-level vancomycin-resistant VANB-type Enterococcus D366 and of the naturally glycopeptide-resistant species Lactobacillus casei, Pediococcus pentosaceus, Leuconostoc mesenteroides, and Enterococcus gallinarum. J Bacteriol 176:2398-2405
    • (1994) J Bacteriol , vol.176 , pp. 2398-2405
    • Billot-Klein, D.1    Gutmann, L.2    Sablé, S.3    Guittet, E.4    Van Heijenoort, J.5
  • 3
    • 0026355435 scopus 로고
    • Molecular basis for vancomycin resistance in Enterococcus faecium BM4147: Biosynthesis of a depsipeptide peptidoglycan precursor by vancomycin resistance proteins VanH and VanA
    • Bugg TDH, Wright GD, Dutka-Malen S, Arthur M, Courvalin P, Walsh CT (1991) Molecular basis for vancomycin resistance in Enterococcus faecium BM4147: biosynthesis of a depsipeptide peptidoglycan precursor by vancomycin resistance proteins VanH and VanA. Biochemistry 30:10408-10415
    • (1991) Biochemistry , vol.30 , pp. 10408-10415
    • Bugg, T.D.H.1    Wright, G.D.2    Dutka-Malen, S.3    Arthur, M.4    Courvalin, P.5    Walsh, C.T.6
  • 5
    • 0024290414 scopus 로고
    • Isolation, cloning, and sequencing of the Salmonella typhimurium ddlA gene with purification and characterization of its product, D-alanine:D-alanine ligase (ADP-forming)
    • Daub E, Zawadzke LE, Botstein D, Walsh CT (1988) Isolation, cloning, and sequencing of the Salmonella typhimurium ddlA gene with purification and characterization of its product, D-alanine:D-alanine ligase (ADP-forming). Biochemistry 27:3701-3708
    • (1988) Biochemistry , vol.27 , pp. 3701-3708
    • Daub, E.1    Zawadzke, L.E.2    Botstein, D.3    Walsh, C.T.4
  • 6
    • 0027451903 scopus 로고
    • Phenotypic identification of the genus Enterococcus and differentiation of phylogenetically distinct enterococcal species and species groups
    • Devriese LA, Pot B, Collins MD (1993) Phenotypic identification of the genus Enterococcus and differentiation of phylogenetically distinct enterococcal species and species groups. J Appl Bacteriol 75:399-408
    • (1993) J Appl Bacteriol , vol.75 , pp. 399-408
    • Devriese, L.A.1    Pot, B.2    Collins, M.D.3
  • 7
    • 0025611885 scopus 로고
    • The VANA glycopeptide resistance protein is related to D-alanyl-D-alanine ligase cell wall biosynthesis enzymes
    • Dutka-Malen S, Molinas C, Arthur M, Courvalin P (1990) The VANA glycopeptide resistance protein is related to D-alanyl-D-alanine ligase cell wall biosynthesis enzymes. Mol Gen Genet 224:364-372
    • (1990) Mol Gen Genet , vol.224 , pp. 364-372
    • Dutka-Malen, S.1    Molinas, C.2    Arthur, M.3    Courvalin, P.4
  • 8
    • 0026522234 scopus 로고
    • Sequence of the vanC gene of Enterococcus gallinarum BM4174 encoding a D-alanine:D-alanine ligase related protein necessary for vancomycin resistance
    • Dutka-Malen S, Molinas C, Arthur M, Courvalin P (1992) Sequence of the vanC gene of Enterococcus gallinarum BM4174 encoding a D-alanine:D-alanine ligase related protein necessary for vancomycin resistance. Gene 112:53-58
    • (1992) Gene , vol.112 , pp. 53-58
    • Dutka-Malen, S.1    Molinas, C.2    Arthur, M.3    Courvalin, P.4
  • 9
    • 0028982632 scopus 로고
    • Analysis of genes encoding D-alanine:D-alanine ligase related enzymes in Leuconostoc mesenteroides and Lactobacillus spp
    • Elisha BG, Courvalin P (1995) Analysis of genes encoding D-alanine:D-alanine ligase related enzymes in Leuconostoc mesenteroides and Lactobacillus spp. Gene 152:79-83
    • (1995) Gene , vol.152 , pp. 79-83
    • Elisha, B.G.1    Courvalin, P.2
  • 10
    • 0029863413 scopus 로고    scopus 로고
    • B two-component regulatory system in Enterococcus faecalis V583
    • B two-component regulatory system in Enterococcus faecalis V583. J Bacteriol 178:1302-1309
    • (1996) J Bacteriol , vol.178 , pp. 1302-1309
    • Evers, S.1    Courvalin, P.2
  • 11
    • 0028151598 scopus 로고
    • Vancomycin resistance: Structure of D-alanine:D-alanine ligase at 2.3 Å resolution
    • Fan C, Moews PC, Walsh CT, Knox JR (1994) Vancomycin resistance: structure of D-alanine:D-alanine ligase at 2.3 Å resolution. Science 266:439-443
    • (1994) Science , vol.266 , pp. 439-443
    • Fan, C.1    Moews, P.C.2    Walsh, C.T.3    Knox, J.R.4
  • 12
    • 0000461280 scopus 로고
    • Confidence limits on phytogenies: An approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phytogenies: an approach using the bootstrap. Evolution 39:783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 14
    • 0025025261 scopus 로고
    • Progressive alignment and phylogenetic tree construction of protein sequences
    • Feng DF, Duolittle RF (1990) Progressive alignment and phylogenetic tree construction of protein sequences. Methods Enzymol 183:375-387
    • (1990) Methods Enzymol , vol.183 , pp. 375-387
    • Feng, D.F.1    Duolittle, R.F.2
  • 15
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specified tree topology
    • Fitch W (1971) Toward defining the course of evolution: minimum change for a specified tree topology. Syst Zool 20:406-416
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.1
  • 16
    • 0029653518 scopus 로고
    • Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
    • Fleischmann RD, Adams MD, White O, Clayton RA, Kirkness EF et al. (1995) Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269:496-512
    • (1995) Science , vol.269 , pp. 496-512
    • Fleischmann, R.D.1    Adams, M.D.2    White, O.3    Clayton, R.A.4    Kirkness, E.F.5
  • 17
    • 0027972697 scopus 로고
    • Vancomycin-resistant Leuconostoc mesenteroides and Lactobacillus casei synthesize cytoplasmic peptidoglycan precursors that terminate in lactate
    • Handwerger S, Pucci MJ, Volk KJ, Liu J, Lee M (1994) Vancomycin-resistant Leuconostoc mesenteroides and Lactobacillus casei synthesize cytoplasmic peptidoglycan precursors that terminate in lactate. J Bacteriol 176:260-264
    • (1994) J Bacteriol , vol.176 , pp. 260-264
    • Handwerger, S.1    Pucci, M.J.2    Volk, K.J.3    Liu, J.4    Lee, M.5
  • 18
    • 0028955732 scopus 로고
    • vanA-mediated high-level glycopeptide resistance in Enterococcus faecium from animal husbandry
    • Klare I, Heier H, Claus H, Reissbrodt R, Witte W (1995) vanA-mediated high-level glycopeptide resistance in Enterococcus faecium from animal husbandry. FEMS Microbiol Lett 125:165-172
    • (1995) FEMS Microbiol Lett , vol.125 , pp. 165-172
    • Klare, I.1    Heier, H.2    Claus, H.3    Reissbrodt, R.4    Witte, W.5
  • 19
    • 0025122091 scopus 로고
    • Presence of chromosomal elements resembling the composite structure Tn3701 in streptococci
    • Le Bouguénec C, Cespédès G, Horaud T (1990) Presence of chromosomal elements resembling the composite structure Tn3701 in streptococci. J Bacteriol 172:727-734
    • (1990) J Bacteriol , vol.172 , pp. 727-734
    • Le Bouguénec, C.1    Cespédès, G.2    Horaud, T.3
  • 20
    • 0028149883 scopus 로고
    • Purification and characterization of the VanB ligase associated with type B vancomycin resistance in Enterococcus faecalis V583
    • Meziane-Cherif D, Badet-Denisot M-A, Evers S, Courvalin P, Badet B (1994) Purification and characterization of the VanB ligase associated with type B vancomycin resistance in Enterococcus faecalis V583. FEBS Lett 354:140-142
    • (1994) FEBS Lett , vol.354 , pp. 140-142
    • Meziane-Cherif, D.1    Badet-Denisot, M.-A.2    Evers, S.3    Courvalin, P.4    Badet, B.5
  • 21
    • 0028071883 scopus 로고
    • Analysis of genes encoding D-alanine:D-alanine ligase related enzymes in Enterococcus casseliflavus and Enterococcus flavescens
    • Navarro F, Courvalin P (1994) Analysis of genes encoding D-alanine:D-alanine ligase related enzymes in Enterococcus casseliflavus and Enterococcus flavescens. Antimicrob Agents Chemother 38:1788-1793
    • (1994) Antimicrob Agents Chemother , vol.38 , pp. 1788-1793
    • Navarro, F.1    Courvalin, P.2
  • 22
    • 0024355483 scopus 로고
    • Structure, biochemistry and mechanism of action of glycopeptide antibiotics
    • Reynolds PE (1989) Structure, biochemistry and mechanism of action of glycopeptide antibiotics. Eur J Clin Microbiol Infect Dis 8:943-950
    • (1989) Eur J Clin Microbiol Infect Dis , vol.8 , pp. 943-950
    • Reynolds, P.E.1
  • 23
    • 0028235256 scopus 로고
    • Analysis of peptidoglycan precursors in vancomycin resistant Enterococcus gallinarum BM4174
    • Reynolds PE, Snaith HM, Maguire AJ, Dutka-Malen S, Courvalin P (1994) Analysis of peptidoglycan precursors in vancomycin resistant Enterococcus gallinarum BM4174. Biochem J 301:5-8
    • (1994) Biochem J , vol.301 , pp. 5-8
    • Reynolds, P.E.1    Snaith, H.M.2    Maguire, A.J.3    Dutka-Malen, S.4    Courvalin, P.5
  • 24
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 26
    • 0028948867 scopus 로고
    • Active site mapping of Escherichia coli D-Ala:D-Ala ligase by structure-based mutagenesis
    • Shi Y, Walsh CT (1995) Active site mapping of Escherichia coli D-Ala:D-Ala ligase by structure-based mutagenesis. Biochemistry 34: 2768-2776
    • (1995) Biochemistry , vol.34 , pp. 2768-2776
    • Shi, Y.1    Walsh, C.T.2
  • 27
    • 0023787609 scopus 로고
    • A procedure for in vitro amplification of DNA segments that lie outside the boundaries of known sequences
    • Triglia T, Peterson MG, Kemp DJ (1988) A procedure for in vitro amplification of DNA segments that lie outside the boundaries of known sequences. Nucleic Acids Res 16:8186
    • (1988) Nucleic Acids Res , vol.16 , pp. 8186
    • Triglia, T.1    Peterson, M.G.2    Kemp, D.J.3
  • 28
    • 0030015002 scopus 로고    scopus 로고
    • Influence of oral glycopeptides (vancomycin and teicoplanin) on the fecal flora of human volunteers: Selection of highly-glycopeptide-resistant strains
    • in press
    • Van der Auwera P, Pensart N, Korten V, Murray BE, Leclercq R (1996) Influence of oral glycopeptides (vancomycin and teicoplanin) on the fecal flora of human volunteers: selection of highly-glycopeptide-resistant strains. J Infect Dis (in press)
    • (1996) J Infect Dis
    • Van Der Auwera, P.1    Pensart, N.2    Korten, V.3    Murray, B.E.4    Leclercq, R.5
  • 29
    • 0024561489 scopus 로고
    • Enzymes in the D-alanine branch of bacterial cell wall peptidoglycan assembly
    • Walsh CT (1989) Enzymes in the D-alanine branch of bacterial cell wall peptidoglycan assembly. J Biol Chem 264:2393-2396
    • (1989) J Biol Chem , vol.264 , pp. 2393-2396
    • Walsh, C.T.1
  • 30
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
    • Yanisch-Perron C, Vieira J, Messing J (1985) Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3
  • 31
    • 0025774861 scopus 로고
    • Existence of two D-alanine:D-alanine ligases in Escherichia coli: Cloning and sequencing of the ddlA gene, and purification and characterization of the DdlA and DdlB enzymes
    • Zawadzke LE, Bugg TDH, Walsh CT (1991) Existence of two D-alanine:D-alanine ligases in Escherichia coli: cloning and sequencing of the ddlA gene, and purification and characterization of the DdlA and DdlB enzymes. Biochemistry 30:1673-1682
    • (1991) Biochemistry , vol.30 , pp. 1673-1682
    • Zawadzke, L.E.1    Bugg, T.D.H.2    Walsh, C.T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.