메뉴 건너뛰기




Volumn 74, Issue 15, 2000, Pages 6992-7004

Genetic diversity among Lassa virus strains

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIODIVERSITY; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC VARIABILITY; LASSA VIRUS; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL;

EID: 0033912935     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.74.15.6992-7004.2000     Document Type: Article
Times cited : (252)

References (65)
  • 3
    • 0008555917 scopus 로고    scopus 로고
    • Lassa fever
    • Anonymous. 1997. Lassa fever. Wkly. Epidemiol. Rec. 20:145-146.
    • (1997) Wkly. Epidemiol. Rec. , vol.20 , pp. 145-146
  • 4
    • 0021348207 scopus 로고
    • The sequences of the N protein gene and intergenic region of the S RNA of Pichinde arenavirus
    • Auperin, D. D., M. Galinski, and D. H. Bishop. 1984. The sequences of the N protein gene and intergenic region of the S RNA of Pichinde arenavirus. Virology 134:208-219.
    • (1984) Virology , vol.134 , pp. 208-219
    • Auperin, D.D.1    Galinski, M.2    Bishop, D.H.3
  • 5
    • 0024523167 scopus 로고
    • Nucleotide sequence of the Lassa virus (Josiah strain) S genome RNA and amino acid sequence comparison of the N and GPC proteins to other arenaviruses
    • Auperin, D. D., and J. B. McCormick. 1989. Nucleotide sequence of the Lassa virus (Josiah strain) S genome RNA and amino acid sequence comparison of the N and GPC proteins to other arenaviruses. Virology 168:421-425.
    • (1989) Virology , vol.168 , pp. 421-425
    • Auperin, D.D.1    McCormick, J.B.2
  • 6
    • 0021705756 scopus 로고
    • Sequencing studies of Pichinde arenavirus S RNA indicate a novel coding strategy, an ambisense viral S RNA
    • Auperin, D. D., V. Romanowski, M. Galinski, and D. H. Bishop. 1984. Sequencing studies of Pichinde arenavirus S RNA indicate a novel coding strategy, an ambisense viral S RNA. J. Virol. 52:897-904.
    • (1984) J. Virol. , vol.52 , pp. 897-904
    • Auperin, D.D.1    Romanowski, V.2    Galinski, M.3    Bishop, D.H.4
  • 7
    • 0022500116 scopus 로고
    • Nucleotide sequence of the glycoprotein gene and intergenic region of the Lassa virus S genome RNA
    • Auperin, D. D., D. R. Sasso, and J. B. McCormick. 1986. Nucleotide sequence of the glycoprotein gene and intergenic region of the Lassa virus S genome RNA. Virology 154:155-167.
    • (1986) Virology , vol.154 , pp. 155-167
    • Auperin, D.D.1    Sasso, D.R.2    McCormick, J.B.3
  • 9
    • 0029913620 scopus 로고    scopus 로고
    • Oliveros virus: A novel arenavirus from Argentina
    • Bowen, M. D., C. J. Peters, J. N. Mills, and S. T. Nichol. 1996. Oliveros virus: a novel arenavirus from Argentina. Virology 217:362-366.
    • (1996) Virology , vol.217 , pp. 362-366
    • Bowen, M.D.1    Peters, C.J.2    Mills, J.N.3    Nichol, S.T.4
  • 10
    • 0029975554 scopus 로고    scopus 로고
    • The phylogeny of New World (Tacaribe complex) arenaviruses
    • Bowen, M. D., C. J. Peters, and S. T. Nichol. 1996. The phylogeny of New World (Tacaribe complex) arenaviruses. Virology 219:285-290.
    • (1996) Virology , vol.219 , pp. 285-290
    • Bowen, M.D.1    Peters, C.J.2    Nichol, S.T.3
  • 11
    • 0031297630 scopus 로고    scopus 로고
    • Phylogenetic analysis of the Arenaviridae: Patterns of virus evolution and evidence for cospeciation between arenaviruses and their rodent hosts
    • Bowen, M. D., C. J. Peters, and S. T. Nichol. 1997. Phylogenetic analysis of the Arenaviridae: patterns of virus evolution and evidence for cospeciation between arenaviruses and their rodent hosts. Mol. Phylogenet. Evol. 8:301-316.
    • (1997) Mol. Phylogenet. Evol. , vol.8 , pp. 301-316
    • Bowen, M.D.1    Peters, C.J.2    Nichol, S.T.3
  • 12
    • 0000367652 scopus 로고
    • The limits of amino acid sequence data in angiosperm phylogenetic reconstruction
    • Bremer, K. 1988. The limits of amino acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42:795-803.
    • (1988) Evolution , vol.42 , pp. 795-803
    • Bremer, K.1
  • 13
    • 0014819935 scopus 로고
    • Lassa fever, a new virus disease of man from West Africa. 3. Isolation and characterization of the virus
    • Buckley, S. M., and J. Casals. 1970. Lassa fever, a new virus disease of man from West Africa. 3. Isolation and characterization of the virus. Am. J. Trop. Med. Hyg. 19:680-691.
    • (1970) Am. J. Trop. Med. Hyg. , vol.19 , pp. 680-691
    • Buckley, S.M.1    Casals, J.2
  • 14
    • 0002244194 scopus 로고
    • Glycoproteins of the arenaviruses
    • M. S. Salvato (ed.), Plenum Press, New York, N.Y.
    • Burns, J. W., and M. J. Buchmeier. 1993. Glycoproteins of the arenaviruses, p. 17-35. In M. S. Salvato (ed.), The Arenaviridae. Plenum Press, New York, N.Y.
    • (1993) The Arenaviridae , pp. 17-35
    • Burns, J.W.1    Buchmeier, M.J.2
  • 15
    • 0028191832 scopus 로고
    • Molecular phylogeny of the praomys complex (Rodentia: Murinae): A study based on DNA/DNA hybridization experiments
    • Chevret, P., L. Granjon, J.-M. DuPlantier, C. Denys, and F. M. Catzeflis. 1994. Molecular phylogeny of the praomys complex (Rodentia: Murinae): a study based on DNA/DNA hybridization experiments. Zoolog. J. Linnean Soc. 112:425-442.
    • (1994) Zoolog. J. Linnean Soc. , vol.112 , pp. 425-442
    • Chevret, P.1    Granjon, L.2    DuPlantier, J.-M.3    Denys, C.4    Catzeflis, F.M.5
  • 16
    • 0002508007 scopus 로고
    • Ecology and epidemiology of arenaviruses and their hosts
    • M. S. Salvato (ed.), Plenum Press, New York, N. Y.
    • Childs, J. E., and C. J. Peters. 1993. Ecology and epidemiology of arenaviruses and their hosts, p. 331-384. In M. S. Salvato (ed.), The Arenaviridae. Plenum Press, New York, N. Y.
    • (1993) The Arenaviridae , pp. 331-384
    • Childs, J.E.1    Peters, C.J.2
  • 17
    • 0026080603 scopus 로고
    • Nucleotide sequence of the S RNA of Lassa virus (Nigerian strain) and comparative analysis of arena-virus gene products
    • Clegg, J. C., S. M. Wilson, and J. D. Oram. 1991. Nucleotide sequence of the S RNA of Lassa virus (Nigerian strain) and comparative analysis of arena-virus gene products. Virus Res. 18:151-164.
    • (1991) Virus Res. , vol.18 , pp. 151-164
    • Clegg, J.C.1    Wilson, S.M.2    Oram, J.D.3
  • 19
    • 0030819117 scopus 로고    scopus 로고
    • Completion of the Lassa fever virus sequence and identification of a RING finger open reading frame at the L RNA 5′ end
    • Djavani, M., I. S. Lukashevich, A. Sanchez, S. T. Nichol, and M. S. Salvato. 1997. Completion of the Lassa fever virus sequence and identification of a RING finger open reading frame at the L RNA 5′ end. Virology 235:414-418.
    • (1997) Virology , vol.235 , pp. 414-418
    • Djavani, M.1    Lukashevich, I.S.2    Sanchez, A.3    Nichol, S.T.4    Salvato, M.S.5
  • 20
    • 0031963155 scopus 로고    scopus 로고
    • Molecular systematics and paleobiogeography of the South American sigmodontine rodents
    • Engel, S. R., K. M. Hogan, J. F. Taylor, and S. K. Davis. 1998. Molecular systematics and paleobiogeography of the South American sigmodontine rodents. Mol. Biol. Evol. 15:35-49.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 35-49
    • Engel, S.R.1    Hogan, K.M.2    Taylor, J.F.3    Davis, S.K.4
  • 21
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 23
    • 0016661934 scopus 로고
    • Surveillance of Lassa fever in missionaries stationed in West Africa
    • Frame, J. D. 1975. Surveillance of Lassa fever in missionaries stationed in West Africa. Bull. W. H. O. 52:593-598.
    • (1975) Bull. W. H. O. , vol.52 , pp. 593-598
    • Frame, J.D.1
  • 24
    • 0014824833 scopus 로고
    • Lassa fever, a new virus disease of man from West Africa. 1. Clinical description and pathological findings
    • Frame, J. D., J. M. Baldwin, Jr., D. J. Gocke, and J. M. Troup. 1970. Lassa fever, a new virus disease of man from West Africa. 1. Clinical description and pathological findings. Am. J. Trop. Med. Hyg. 19:670-676.
    • (1970) Am. J. Trop. Med. Hyg. , vol.19 , pp. 670-676
    • Frame, J.D.1    Baldwin Jr., J.M.2    Gocke, D.J.3    Troup, J.M.4
  • 27
    • 0025807536 scopus 로고
    • Molecular organization of Junin virus S RNA: Complete nucleotide sequence, relationship with other members of the Arenaviridae and unusual secondary structures
    • Ghiringhelli, P. D., R. V. Rivera-Pomar, M. E. Lozano, O. Grau, and V. Romanowski. 1991. Molecular organization of Junin virus S RNA: complete nucleotide sequence, relationship with other members of the Arenaviridae and unusual secondary structures. J. Gen. Virol. 72:2129-2141.
    • (1991) J. Gen. Virol. , vol.72 , pp. 2129-2141
    • Ghiringhelli, P.D.1    Rivera-Pomar, R.V.2    Lozano, M.E.3    Grau, O.4    Romanowski, V.5
  • 28
    • 0025031771 scopus 로고
    • Prediction of arenavirus fusion peptides on the basis of computer analysis of envelope protein sequences
    • Glushakova, S. E., I. S. Lukashevich, and L. A. Baratova. 1990. Prediction of arenavirus fusion peptides on the basis of computer analysis of envelope protein sequences. FEBS Lett. 269:145-147.
    • (1990) FEBS Lett. , vol.269 , pp. 145-147
    • Glushakova, S.E.1    Lukashevich, I.S.2    Baratova, L.A.3
  • 29
    • 0030586018 scopus 로고    scopus 로고
    • Genetic characterization and phylogeny of Sabia virus, an emergent pathogen in Brazil
    • Gonzalez, J. P., M. D. Bowen, S. T. Nichol, and R. Rico-Hesse. 1996. Genetic characterization and phylogeny of Sabia virus, an emergent pathogen in Brazil. Virology 221:318-324.
    • (1996) Virology , vol.221 , pp. 318-324
    • Gonzalez, J.P.1    Bowen, M.D.2    Nichol, S.T.3    Rico-Hesse, R.4
  • 31
    • 0024239962 scopus 로고
    • Genetic variation among Lassa and Lassa-related arenaviruses analysed by T1-oligonucleotide mapping
    • Gonzalez, J. P., J. B. McCormick, and M. P. Kiley. 1988. Genetic variation among Lassa and Lassa-related arenaviruses analysed by T1-oligonucleotide mapping. Ann. Inst. Pasteur Virol. 139:405-420.
    • (1988) Ann. Inst. Pasteur Virol. , vol.139 , pp. 405-420
    • Gonzalez, J.P.1    McCormick, J.B.2    Kiley, M.P.3
  • 34
    • 0026491869 scopus 로고
    • Sequence of the nucleocapsid protein gene of Machupo virus: Close relationship with another South American pathogenic arenavirus, Junin
    • Griffiths, C. M., S. M. Wilson, and J. C. Clegg. 1992. Sequence of the nucleocapsid protein gene of Machupo virus: close relationship with another South American pathogenic arenavirus, Junin. Arch. Virol. 124:371-377.
    • (1992) Arch. Virol. , vol.124 , pp. 371-377
    • Griffiths, C.M.1    Wilson, S.M.2    Clegg, J.C.3
  • 35
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • Hasegawa, M., H. Kishino, and T. Yano. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 21:160-174.
    • (1985) J. Mol. Evol. , vol.21 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 36
    • 0026458378 scopus 로고
    • Amino acid substitution matrices from protein blocks
    • Henikoff, S., and J. G. Henikoff. 1992. Amino acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. USA 89:10915-10919.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 10915-10919
    • Henikoff, S.1    Henikoff, J.G.2
  • 38
    • 84882456552 scopus 로고    scopus 로고
    • Los Alamos National Laboratory, Los Alamos, N. Mex.
    • HIV Database and Analysis Group. Recombinant Identification Program (RIP). Los Alamos National Laboratory, Los Alamos, N. Mex.
    • Recombinant Identification Program (RIP)
  • 41
    • 0020515396 scopus 로고
    • Case-control study of Mastomys natalensis and humans in Lassa virus-infected households in Sierra Leone
    • Keenlyside, R. A., J. B. McCormick, P. A. Webb, E. Smith, L. Elliott, and K. M. Johnson. 1983. Case-control study of Mastomys natalensis and humans in Lassa virus-infected households in Sierra Leone. Am. J. Trop. Med. Hyg. 32:829-837.
    • (1983) Am. J. Trop. Med. Hyg. , vol.32 , pp. 829-837
    • Keenlyside, R.A.1    McCormick, J.B.2    Webb, P.A.3    Smith, E.4    Elliott, L.5    Johnson, K.M.6
  • 42
    • 0024307824 scopus 로고
    • Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
    • Kishino, H., and M. Hasegawa. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29:170-179.
    • (1989) J. Mol. Evol. , vol.29 , pp. 170-179
    • Kishino, H.1    Hasegawa, M.2
  • 44
    • 0030911899 scopus 로고    scopus 로고
    • Characterization of arenaviruses using a family-specific primer set for RT-PCR amplification and RFLP analysis. Its potential use for detection of uncharacterized arenaviruses
    • Lozano, M. E., D. M. Posik, C. G. Albarino, G. Schujman, P. D. Ghiringhelli, G. Calderon, M. Sabattini, and V. Romanowski. 1997. Characterization of arenaviruses using a family-specific primer set for RT-PCR amplification and RFLP analysis. Its potential use for detection of uncharacterized arenaviruses. Virus Res. 49:79-89.
    • (1997) Virus Res. , vol.49 , pp. 79-89
    • Lozano, M.E.1    Posik, D.M.2    Albarino, C.G.3    Schujman, G.4    Ghiringhelli, P.D.5    Calderon, G.6    Sabattini, M.7    Romanowski, V.8
  • 45
    • 0031052955 scopus 로고    scopus 로고
    • The Lassa fever virus L gene: Nucleotide sequence, comparison, and precipitation of a predicted 250 kDa protein with monospecific antiserum
    • Lukashevich, I. S., M. Djavani, K. Shapiro, A. Sanchez, E. Ravkov, S. T. Nichol, and M. S. Salvato. 1997. The Lassa fever virus L gene: nucleotide sequence, comparison, and precipitation of a predicted 250 kDa protein with monospecific antiserum. J. Gen. Virol. 78:547-551.
    • (1997) J. Gen. Virol. , vol.78 , pp. 547-551
    • Lukashevich, I.S.1    Djavani, M.2    Shapiro, K.3    Sanchez, A.4    Ravkov, E.5    Nichol, S.T.6    Salvato, M.S.7
  • 46
    • 0023077670 scopus 로고
    • Epidemiology and control of Lassa fever
    • McCormick, J. B. 1987. Epidemiology and control of Lassa fever. Curr. Top. Microbiol. Immunol. 134:69-78.
    • (1987) Curr. Top. Microbiol. Immunol. , vol.134 , pp. 69-78
    • McCormick, J.B.1
  • 49
    • 0016617334 scopus 로고
    • Lassa fever: A review of the epidemiology and epizootiology
    • Monath, T. P. 1975. Lassa fever: a review of the epidemiology and epizootiology. Bull. W. H. O. 52:577-592.
    • (1975) Bull. W. H. O. , vol.52 , pp. 577-592
    • Monath, T.P.1
  • 51
    • 0030472821 scopus 로고    scopus 로고
    • Computational characterisation of potential RNA-binding sites in arenavirus nucleocapsid proteins
    • Parisi, G., J. Echave, D. Ghiringhelli, and V. Romanowski. 1996. Computational characterisation of potential RNA-binding sites in arenavirus nucleocapsid proteins. Virus Genes 13:247-254.
    • (1996) Virus Genes , vol.13 , pp. 247-254
    • Parisi, G.1    Echave, J.2    Ghiringhelli, D.3    Romanowski, V.4
  • 52
    • 0020530298 scopus 로고
    • Mastomys (Rodentia: Muridae) species distinguished by hemoglobin pattern differences
    • Robbins, C. B., J. W. Krebs, Jr., and K. M. Johnson. 1983. Mastomys (Rodentia: Muridae) species distinguished by hemoglobin pattern differences. Am. J. Trop. Med. Hyg. 32:624-630.
    • (1983) Am. J. Trop. Med. Hyg. , vol.32 , pp. 624-630
    • Robbins, C.B.1    Krebs Jr., J.W.2    Johnson, K.M.3
  • 53
    • 0022004801 scopus 로고
    • Complete sequence of the S RNA of lymphocytic choriomeningitis virus (WE strain) compared to that of Pichinde arenavirus
    • Romanowski, V., Y. Matsuura, and D. H. Bishop. 1985. Complete sequence of the S RNA of lymphocytic choriomeningitis virus (WE strain) compared to that of Pichinde arenavirus. Virus Res. 3:101-114.
    • (1985) Virus Res. , vol.3 , pp. 101-114
    • Romanowski, V.1    Matsuura, Y.2    Bishop, D.H.3
  • 55
    • 0023908256 scopus 로고
    • Virus-lymphocyte interactions. IV. Molecular characterization of LCMV Armstrong (CTL+) small genomic segment and that of its variant, clone 13 (CTL-)
    • Salvato, M., E. Shimomaye, P. Southern, and M. B. Oldstone. 1988. Virus-lymphocyte interactions. IV. Molecular characterization of LCMV Armstrong (CTL+) small genomic segment and that of its variant, clone 13 (CTL-). Virology 164:517-522.
    • (1988) Virology , vol.164 , pp. 517-522
    • Salvato, M.1    Shimomaye, E.2    Southern, P.3    Oldstone, M.B.4
  • 56
    • 0000557443 scopus 로고    scopus 로고
    • Arenaviridae: The viruses and their replication
    • B. N. Fields, D. M. Knipe, P. M. Howley, et al. (ed.), Lippencott-Raven, Philadelphia, Pa
    • Southern, P. J. 1996. Arenaviridae: the viruses and their replication, p. 1505-1519. In B. N. Fields, D. M. Knipe, P. M. Howley, et al. (ed.), Fields virology. Lippencott-Raven, Philadelphia, Pa.
    • (1996) Fields Virology , pp. 1505-1519
    • Southern, P.J.1
  • 57
    • 0003400060 scopus 로고    scopus 로고
    • Zoologisches Institut, Universität München, Munich, Germany
    • Strimmer, K., and A. von Haeseler. 1997. PUZZLE. Zoologisches Institut, Universität München, Munich, Germany.
    • (1997) PUZZLE
    • Strimmer, K.1    Von Haeseler, A.2
  • 59
    • 0031697726 scopus 로고    scopus 로고
    • Detection of Lassa virus antinucleoprotein immunoglobulin G (IgG) and IgM antibodies by a simple recombinant immunoblot assay for field use
    • Ter Meulen, S., K. Koulemou, T. Wittekindt, K. Windisch, S. Strigl, S. Conde, and H. Schmitz. 1998. Detection of Lassa virus antinucleoprotein immunoglobulin G (IgG) and IgM antibodies by a simple recombinant immunoblot assay for field use. J. Clin. Microbiol. 36:3143-3148.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 3143-3148
    • Ter Meulen, S.1    Koulemou, K.2    Wittekindt, T.3    Windisch, K.4    Strigl, S.5    Conde, S.6    Schmitz, H.7
  • 61
    • 0020003981 scopus 로고    scopus 로고
    • A patient with Lassa fever from the Upper Volta, diagnosed in the Netherlands
    • In Dutch
    • van der Heide, R. M. A patient with Lassa fever from the Upper Volta, diagnosed in the Netherlands. Ned. Tijdschr. Geneeskd. 126:566-569. (In Dutch.)
    • Ned. Tijdschr. Geneeskd. , vol.126 , pp. 566-569
    • Van Der Heide, R.M.1
  • 62
    • 0024474289 scopus 로고
    • Molecular analyses of a five-amino-acid cytotoxic T-lymphocyte (CTL) epitope: An immunodominant region which induces nonreciprocal CTL cross-reactivity
    • Whitton, J. L., A. Tishon, H. Lewicki, J. Gebhard, T. Cook, M. Salvato, E. Joly, and M. B. Oldstone. 1989. Molecular analyses of a five-amino-acid cytotoxic T-lymphocyte (CTL) epitope: an immunodominant region which induces nonreciprocal CTL cross-reactivity. J. Virol. 63:4303-4310.
    • (1989) J. Virol. , vol.63 , pp. 4303-4310
    • Whitton, J.L.1    Tishon, A.2    Lewicki, H.3    Gebhard, J.4    Cook, T.5    Salvato, M.6    Joly, E.7    Oldstone, M.B.8
  • 63
    • 0026089199 scopus 로고
    • Sequence analysis of the S RNA of the African arenavirus Mopeia: An unusual secondary structure feature in the intergenic region
    • Wilson, S. M., and J. C. S. Clegg. 1991. Sequence analysis of the S RNA of the African arenavirus Mopeia: an unusual secondary structure feature in the intergenic region. Virology 180:543-552.
    • (1991) Virology , vol.180 , pp. 543-552
    • Wilson, S.M.1    Clegg, J.C.S.2
  • 64
    • 0032807805 scopus 로고    scopus 로고
    • Sequence analysis of the small RNA segment of guinea pig-passaged Pichinde virus variants
    • Zhang, L., K. Marriott, and J. F. Aronson. 1999. Sequence analysis of the small RNA segment of guinea pig-passaged Pichinde virus variants. Am. J. Trop. Med. Hyg. 61:220-225.
    • (1999) Am. J. Trop. Med. Hyg. , vol.61 , pp. 220-225
    • Zhang, L.1    Marriott, K.2    Aronson, J.F.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.