The distribution of somatic H1 subtypes is non-random on active vs. inactive chromatin: Distribution in human fetal fibroblasts

Chromosome Research

Volumn 8, Issue 5, 2000, Pages 405-424

  Parseghian, Missag ^a   Newcomb, Robert ^b   Winokur, Sara ^c   Hamkalo, Barbara ^b  

^a Techniclone Corporation   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Chromatin organization; Heat shock; Histone H1

Indexed keywords

ACTIN; HISTONE H1;

AMINO ACID SEQUENCE; ARTICLE; CENTROMERE; CHROMATIN STRUCTURE; DNA SEQUENCE; FETUS; GENE EXPRESSION; GENE LOCATION; GENE SEQUENCE; GENETIC TRANSCRIPTION; HUMAN; HUMAN CELL; IMMUNOPRECIPITATION; MALE; NORMAL HUMAN; PRIORITY JOURNAL; PROTEIN CROSS LINKING; PROTEIN DEPLETION; PROTEIN LOCALIZATION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; TELOMERE;

ACTINS; CELL LINE; CHROMATIN; CROSS-LINKING REAGENTS; DNA-BINDING PROTEINS; FIBROBLASTS; HISTONES; HUMANS; IMMUNOGLOBULINS; LYMPHOID ENHANCER-BINDING FACTOR 1; MODELS, GENETIC; NERVE TISSUE PROTEINS; PLASMIDS; POLYMERASE CHAIN REACTION; PRECIPITIN TESTS; PROTEIN-TYROSINE KINASES; PROTO-ONCOGENE PROTEINS C-MYC; PSEUDOGENES; RECEPTOR, FIBROBLAST GROWTH FACTOR, TYPE 3; RECEPTORS, FIBROBLAST GROWTH FACTOR; TANDEM REPEAT SEQUENCES; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

EID: 0033850576     PISSN: 09673849     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1009262819961     Document Type: Article

References (72)

1. Variants of wheat histone H1 and N- and C-terminal extensions
2. Differential effect of H1 variant overexpression on cell cycle progression and gene expression
3. Expression of a histone H1 gene (H1.1) in human testis and Hassall's corpuscles of the thymus
4. Increased phosphorylation of histone H1 in mouse fibroblasts transformed with oncogenes or constitutively active mitogen-activated protein kinase kinase
5. Age-related analysis of EcoRI generated satellite DNA-containing chromatin of rat liver
6. The myc oncogene: Its role in transformation and differentiation
7. Microheterogeneity in H1 histones and its consequences
8. Co-operative interactions of oligonucleosomal DNA with the Hie histone variant and its poly(ADP-ribosyl)ated isoform
9. A simplified formaldehyde fixation and immunoprecipitation technique for studying protein-DNA interactions
10. Formaldehyde cross-linking and immunoprecipitation demonstrate developmental changes in H1 association with transcriptionally active genes
11. H1 variant synthesis in proliferating and quiescent human cells
12. Structure, chromosome location and expression of the human gamma-actin gene: Differential evolution, location and expression of the cytoskeletal beta- and gamma-actin genes
13. Expression of murine H1 histone genes during postnatal development
14. Replication timing of genes and middle repetitive sequences
15. Isolation and characterization of full-length cDNA clones for human α-, β-, and γ-actin mRNAs: Skeletal but not cytoplasmic actins have an amino-terminal cysteine that is subsequently removed
16. The glyceraldehyde 3 phosphate dehydrogenase gene family: Structure of a human cDNA and of an X chromosome linked pseudogene; amazing complexity of the gene family in mouse
17. Control of RNA polymerase binding to chromatin by variations in linker histone composition
18. A direct link between core histone acetylation and transcriptionally active chromatin
19. Sequence and regulation of a gene encoding a human 89-kilodalton heat shock protein
20. Cloned human and mouse kappa immunoglobulin constant and J region genes conserve homology in functional segments
21. Synthesis and degradation of H1 histone subtypes in mouse lymphoma L5178Y cells
22. The distribution of H1 histone is nonuniform in chromatin and correlates with different degrees of condensation
23. A new method for the isolation of replicative chromatin: Selective deposition of histone on both new and old DNA
24. A mouse histone H1 variant, H1b, binds preferentially to a regulatory sequence within a mouse H3.2 replication-dependent histone gene
25. Chromatin structure of transcriptionally competent and repressed genes
26. The H1A histone variant is an in-vivo repressor of oocyte-type 5S gene transcription in Xenopus laevis embryos
27. Developmentally regulated expression of linker-histone variants in vertebrates
28. The histone H1 complements of dividing and nondividing cells of the mouse
29. Differences in evolutionary stability among mammalian H1 subtypes: Implications for the roles of H1 subtypes in chromatin
30. Condensation of dinucleosomes by individual subfractions of H1 histone
31. Heat shock induction of HSP89 is regulated in cellular aging
32. Varied expression patterns of human H1 histone genes in different cell lines
33. Distribution of non-telomeric sites of the (TTAGGG)(n) telomeric sequence in vertebrate chromosomes
34. Histone H1 in two subspecies of Chironomus thummi with different genome sizes: Homologous chromosome sites differ largely in their content of a specific H1 variant
35. A highly conserved repetitive DNA sequence, (TTAGGG)(n), present at the telomeres of human chromosomes
36. Mapping polycomb-repressed domains in the bithorax complex using in vivo formaldehyde cross-linked chromatin
37. Mapping of the gene family for human heat-shock protein 90α to chromosomes 1, 4, 11, and 14
38. Differential nucleosome positioning on Xenopus oocyte and somatic 5S RNA genes determines both TFIIIA and H1 binding: A mechanism for selective H1 repression
39. Fractionation of human H1 subtypes and characterization of a subtype-specific antibody exhibiting non-uniform nuclear staining
40. A proposal for a coherent mammalian histone H1 nomenclature correlated with amino acid sequences
41. Characterization of a set of antibodies specific for three human histone H1 subtypes
42. Histone H1 subfractions and H1°turnover at different rates in nondividing cells
43. Changes in H1 complement in differentiating rat-brain cortical neurons
44. Evolution of the vertebrate H1 histone class: Evidence for the functional differentiation of the subtypes
45. ADP ribosylation of rat liver lysine-rich histone in vitro
46. Association of histone H1°with a gene repressed during liver development
47. The transcriptional regulation of Xenopus 5S RNA genes in chromatin: The roles of active stable transcription complexes and histone H1
48. Structural and functional differences between histone H1 sequence variants with differential intranuclear distribution
49. Structurally divergent histone H1 variants in chromosomes containing highly condensed interphase chromatin
50. Targeted disruption of 01H1 encoding a particular H1 histone variant causes changes in protein patterns in the DT40 chicken B cell line
51. Role of histone H1 as an architectural determinant of chromatin structure and as a specific repressor of transcription on Xenopus oocyte 5S rRNA genes
52. Histones from mammalian testes: The widespread occurrence of H1t
53. Mice develop normally without the H1°linker histone
54. Expression of a histone H1-like protein is restricted to early Xenopus development
55. Mapping protein-DNA interactions in vivo with formaldehyde: Evidence that histone H4 is retained on a highly transcribed gene
56. Human postsynaptic density-95 (PSD95): Location of the gene (DLG4) and possible function in nonneural, as well as in neural tissues
57. A single copy of linker H1 genes is enough for proliferation of the DT40 chicken B cell line, and linker H1 variants participate in regulation of gene expression
58. An approximately half set of histone genes is enough for cell proliferation and a lack of several histone variants causes protein pattern changes in the DT40 chicken B cell line
59. In vivo phosphorylation of histone H1 variants during the cell cycle
60. In vitro binding of H1 histone subtypes to nucleosomal organized mouse mammary tumor virus long terminal repeat promotor
61. A gene encoding a fibroblast growth factor receptor isolated from the Huntington disease gene region of human chromosome 4
62. Lesch-Nyhan syndrome
63. Lef-1, a gene encoding a lymphoid-specific protein, with an HMG domain, regulates T-cell receptor α enhancer function
64. Mapping the intron-containing human hsp 90α (HSPCAL4) gene to chromosome band 14p32
65. FSHD associated DNA rearrangements are due to deletions of integral copies of a 3.2 kb tandemly repeated unit
66. The globular domain of histone H1 is sufficient to direct specific gene repression in early Xenopus embryos
67. The mouse histone H1 genes: Gene organization and differential regulation
68. A thymus-specific member of the HMG protein family regulates the human T-cell receptor Cα enhancer
69. Histone-H1-dependent chromatin superstructures and the suppression of gene activity
70. The DNA rearrangement associated with facioscapulohumeral muscular dystrophy involves a heterochromatin-associated repetitive element: Implications for a role of chromatin structure in the pathogenesis of the disease
71. Characterization of a cloned repetitive DNA sequence concentrated on the human X chromosome