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Volumn 16, Issue 8, 2000, Pages 699-706

Six-fold speed-up of Smith-Waterman sequence database searches using parallel processing on common microprocessors

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; COMPUTER PROGRAM; COMPUTER SYSTEM; CONTROLLED STUDY; COST CONTROL; DATA ANALYSIS; DATA BASE; GENE SEQUENCE; INFORMATION PROCESSING; INFORMATION SCIENCE; MATHEMATICAL ANALYSIS; METHODOLOGY; MICROPROCESSOR; PRIORITY JOURNAL; SEQUENCE ANALYSIS; VELOCITY;

EID: 0033743209     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/16.8.699     Document Type: Article
Times cited : (173)

References (18)
  • 1
    • 4243892544 scopus 로고
    • Microparallelism and high performance protein matching
    • In Proceedings of the 1995 ACM/IEEE Supercomputing Conference: San Diego, California, Dec 3-8, 1995.
    • (1995)
    • Alpern, B.1    Carter, L.2    Gatlin, K.S.3
  • 6
    • 85037793808 scopus 로고    scopus 로고
    • Architectural and design implications of mediaprocessing
    • (1998)
    • Dubey, P.K.1
  • 8
    • 0020484488 scopus 로고
    • An improved algorithm for matching biological sequences
    • (1982) J. Mol. Biol. , vol.162 , pp. 705-708
    • Gotoh, O.1
  • 12
    • 85037790382 scopus 로고    scopus 로고
    • Intel
    • Intel Architecture Software Developer's manual; Instruction Set Reference.
    • (1999) , vol.2
  • 13
    • 85037795114 scopus 로고    scopus 로고
    • Motorola
    • AltiVec Technology Programming Environments Manual.
    • (1998)
  • 14
    • 0025950944 scopus 로고
    • Searching protein sequence libraries: Comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms
    • (1991) Genomics , vol.11 , pp. 635-650
    • Pearson, W.R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.