Structural basis for cold adaptation: Sequence, biochemical properties, and crystal structure of malate dehydrogenase from a psychrophile Aquaspirillium arcticum

Journal of Biological Chemistry

Volumn 274, Issue 17, 1999, Pages 11761-11767

  Kim, Sun Yong ^a   Hwang, Kwang Yeon ^a   Kim, Sung Hou ^b   Sung, Ha Chin ^c   Han, Ye Sun ^a   Cho, Yunje ^a  

^a Korea Institute of Science and Technology   (South Korea)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c NONE

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL ENZYME; MALATE DEHYDROGENASE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE;

ARCTIC CLIMATE; ARTICLE; BACTERIUM ISOLATION; COLD ACCLIMATIZATION; CRYSTAL STRUCTURE; ENZYME ACTIVE SITE; ENZYME KINETICS; ENZYME PURIFICATION; ENZYME STRUCTURE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SEDIMENT; THERMOPHILIC BACTERIUM;

ADAPTATION, PHYSIOLOGICAL; AMINO ACID SEQUENCE; BACTERIA; BINDING SITES; CLONING, MOLECULAR; COLD; ELECTROSTATICS; ENZYME STABILITY; KINETICS; MALATE DEHYDROGENASE; MOLECULAR SEQUENCE DATA; NAD; PROTEIN STRUCTURE, SECONDARY; SEQUENCE HOMOLOGY, AMINO ACID; X-RAY DIFFRACTION;

EID: 0033597205     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.274.17.11761     Document Type: Article

References (33)

1. Feller, G., Narin, E., Arpigny, J. L., Aittaleb, M., Baise, E., Genicot, S., and Gerday, C. (1996) FEMS Microbiol. Rev. 18, 189-202
2. Feller, G., and Gerday, C. (1997) Cell. Mol. Life Sci. 53, 830-841
3. Davail, S., Feller, G., Narinx, E., and Gerday, C. (1994) J. Biol. Chem. 269, 17448-17453
4. Feller, G., Payan, F., Theys, F., Qian, M., Haser, R. R., and Gerday, C. (1994) Eur. J. Biochem. 222, 441-447
5. Gerike, U., Danson, M. J., Russell, N. J., and Hough, D. W. (1997) Eur. J. Biochem. 248, 49-57
6. Tsigos, I., Velonia, K., Smonou, I., and Bouriotis, V. (1998) Eur. J. Biochem. 254, 356-362
7. Goldman, A. (1995) Structure 3, 1277-1279
8. Danson, M. J., and Hough, D. W. (1997) Struct. Comp. Biochem. Physiol. 117A, 307-312
9. Frolow, F., Harel, M., Sussman, J. L., Mevarech, M., and Shoham, M. (1996) Nature Struct. Biol. 3, 452-458
10. Herbert, R. A. (1992) Trends Biotechnol. 10, 495-402
11. Jordan, D. C., and McNicol, P. J. (1979) Can. J. Microbiol. 25, 947-948
12. Goward, C. R., and Nicholls, D. J. (1994) Protein Sci. 3, 1883-1888
13. Kelly, C. A., Nishiyama, M., Ohnishi, Y., Beppu, T., and Birktoft, J. J. (1993) Biochemistry 32, 3913-3922
14. Hall, M. D., Levitt, D. G., and Banaszak, L. J. (1992) J. Mol. Biol. 226, 867-882
15. Hall, M. D., and Banaszak, L. J. (1993) J. Mol. Biol. 232, 213-222
16. Gleason, W. B., Fu, Z., Birktoft, J. J., and Banaszak, L. J. (1994) Biochemistry 33, 2078-2088
17. Birktoft, J. J., Rhodes, G., and Banaszak, L. J. (1989) Biochemistry 28, 6065-6081
18. Letherbarrow, R. J. (1987) ENZFITTER: A Nonlinear Regression Data Analysis Program for the IBM PC/P 52, Elsevier Biosoft, Cambridge, United Kingdom
19. Otwinowski, Z., and Minor, W. (1997) Methods Enzymol. 276, 307-326
20. Brunger, A. T., Kuriyan, J., and Karplus, M. (1987) Science 235, 458-460
21. Sacks, J. S. (1988) J. Mol. Graphics 6, 224-225
22. Engh, R. A., and Huber, R. (1991) Acta Crystallogr. Sec. A 47, 392-400
23. Abad-zapatero, C., Griffith, J. P., Sussman, J. L., and Rossman, M. G. (1987) J. Mol. Biol. 198, 445-467
24. Dunn, C. R., Wilks, H. M., Halsall, D. J., Atkinson, T., Clarke, A. R., Muirhead, H., and Holbrook, J. J. (1991) Philos. Trans. R. Soc. Lond-Biol. Sci. 332, 177-184
25. Silverstein, E., and Sulebele, G. (1969) Biochemistry 8, 2543-2550
26. Russell, R. J. M., Gerike, U., Danson, M. J., Hough, D. W., and Taylor, G. L. (1998) Structure 6, 351-361
27. Bonisch, H., Backmann, J., Kath, T., Naumann, D., and Schafer, G. (1996) Arch. Biochem. Biophys. 333, 75-84
28. Nicholas, A., Sharp, K. A., and Honig, B. (1991) Proteins 11, 281-296
29. Lim, J.-H., Yu, Y. G., Han, Y. S., Cho, S.-J., Ahn, B.-Y., Kim, S.-H., and Cho, Y. (1997) J. Mol. Biol. 270, 259-274
30. Yip, K. S. P., Stillman, T. J., Britton, K. L., Artymiuk, P. J., Baker, P. J., Sedelnikova, S. E., Engle, P. C., Pasquo, A., Chiaraluce, R, Consalvi, V., and Rice, D. W. (1995) Structure 3, 1147-1158
31. Korndorfer, I., Steipe, B., Huber, R., Tomschy, A., and Jaenicke, R. (1995) J. Mol. Biol. 246, 511-521
32. Xu, D., Lin, S. L., and Nussinov, R. (1997) J. Mol. Biol. 265, 68-84
33. Kleywegt, G. J., and Jones, A. T. (1994) Acta Crystallogr. Sec. D 50, 178-185