-
1
-
-
0024300816
-
Physical properties of DNA in vivo as probed by the length dependence of the lac operator looping process
-
Bellomy G. R., Mossing M. C., Record M. T. Jr. Physical properties of DNA in vivo as probed by the length dependence of the lac operator looping process. Biochemistry. 27:1988;3900-3906.
-
(1988)
Biochemistry
, vol.27
, pp. 3900-3906
-
-
Bellomy, G.R.1
Mossing, M.C.2
Record M.T., Jr.3
-
2
-
-
0025874018
-
Stability of a Lac repressor mediated "looped complex"
-
Brenowitz M., Pickar A., Jamison E. Stability of a Lac repressor mediated "looped complex" Biochemistry. 30:1991;5986-5998.
-
(1991)
Biochemistry
, vol.30
, pp. 5986-5998
-
-
Brenowitz, M.1
Pickar, A.2
Jamison, E.3
-
3
-
-
0029160889
-
Transcription regulation by inflexibility of promoter DNA in a looped complex
-
Choy H. E., Park S.-W., Parrack P., Adhya S. Transcription regulation by inflexibility of promoter DNA in a looped complex. Proc. Natl Acad. Sci. USA. 92:1995;7327-7331.
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 7327-7331
-
-
Choy, H.E.1
Park, S.-W.2
Parrack, P.3
Adhya, S.4
-
4
-
-
0026450780
-
Positive and negative effects of DNA bending on activation of transcription from a distant site
-
Claviere-Martin F., Magasanik B. Positive and negative effects of DNA bending on activation of transcription from a distant site. J. Mol. Biol. 227:1992;996-1008.
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 996-1008
-
-
Claviere-Martin, F.1
Magasanik, B.2
-
6
-
-
0026661553
-
Interactions between DNA-bound transcriptional regulators of the Escherichia coli gal operon
-
Dalma-Weiszhausz D. D., Brenowitz M. Interactions between DNA-bound transcriptional regulators of the Escherichia coli gal operon. Biochemistry. 31:1992;6980-6989.
-
(1992)
Biochemistry
, vol.31
, pp. 6980-6989
-
-
Dalma-Weiszhausz, D.D.1
Brenowitz, M.2
-
7
-
-
0032812795
-
TATA box DNA deformation with and without the TATA box binding protein
-
Davis N. A., Majee S. S., Kahn J. D. TATA box DNA deformation with and without the TATA box binding protein. J. Mol. Biol. 291:1999;249-265.
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 249-265
-
-
Davis, N.A.1
Majee, S.S.2
Kahn, J.D.3
-
8
-
-
0030582618
-
Technical comment: DNA looping and Lac repressor-CAP interaction
-
Fried M. G., Hudson J. M. Technical comment: DNA looping and Lac repressor-CAP interaction. Science. 274:1996;1930-1931.
-
(1996)
Science
, vol.274
, pp. 1930-1931
-
-
Fried, M.G.1
Hudson, J.M.2
-
9
-
-
0029004903
-
Crystal structure of lac repressor core tetramer and its implications for DNA looping
-
Friedman A. M., Fischmann T. O., Steitz T. A. Crystal structure of lac repressor core tetramer and its implications for DNA looping. Science. 268:1995;1721-1727.
-
(1995)
Science
, vol.268
, pp. 1721-1727
-
-
Friedman, A.M.1
Fischmann, T.O.2
Steitz, T.A.3
-
10
-
-
0029060412
-
Higher-order nucleoprotein complexes in transcription: Analogies with site-specific recombination
-
Grosschedl R. Higher-order nucleoprotein complexes in transcription: analogies with site-specific recombination. Curr. Opin. Cell Biol. 7:1995;362-370.
-
(1995)
Curr. Opin. Cell Biol.
, vol.7
, pp. 362-370
-
-
Grosschedl, R.1
-
11
-
-
0025272593
-
Application of the method of phage T4 DNA ligase-catalyzed ring-closure to the study of DNA structure. I. Computational analysis
-
Hagerman P. J., Ramadevi V. A. Application of the method of phage T4 DNA ligase-catalyzed ring-closure to the study of DNA structure. I. Computational analysis. J. Mol. Biol. 212:1990;351-362.
-
(1990)
J. Mol. Biol.
, vol.212
, pp. 351-362
-
-
Hagerman, P.J.1
Ramadevi, V.A.2
-
12
-
-
0025012093
-
The integration host factor stimulates interaction of RNA polymerase with NIFA, the transcriptional activator for nitrogen fixation operons
-
Hoover T. R., Santero E., Porter S., Kustu S. The integration host factor stimulates interaction of RNA polymerase with NIFA, the transcriptional activator for nitrogen fixation operons. Cell. 63:1990;11-22.
-
(1990)
Cell
, vol.63
, pp. 11-22
-
-
Hoover, T.R.1
Santero, E.2
Porter, S.3
Kustu, S.4
-
13
-
-
0025025888
-
Co-operative interactions between the catabolite gene activator protein and the lac repressor at the lactose promoter
-
Hudson J. M., Fried M. G. Co-operative interactions between the catabolite gene activator protein and the lac repressor at the lactose promoter. J. Mol. Biol. 214:1990;381-396.
-
(1990)
J. Mol. Biol.
, vol.214
, pp. 381-396
-
-
Hudson, J.M.1
Fried, M.G.2
-
14
-
-
0026766290
-
Protein-induced bending and DNA cyclization
-
Kahn J. D., Crothers D. M. Protein-induced bending and DNA cyclization. Proc. Natl Acad. Sci. USA. 89:1992;6343-6347.
-
(1992)
Proc. Natl Acad. Sci. USA
, vol.89
, pp. 6343-6347
-
-
Kahn, J.D.1
Crothers, D.M.2
-
15
-
-
0032512613
-
Measurement of the DNA bend angle induced by the catabolite activator protein using Monte Carlo simulation of cyclization kinetics
-
Kahn J. D., Crothers D. M. Measurement of the DNA bend angle induced by the catabolite activator protein using Monte Carlo simulation of cyclization kinetics. J. Mol. Biol. 276:1998;287-309.
-
(1998)
J. Mol. Biol.
, vol.276
, pp. 287-309
-
-
Kahn, J.D.1
Crothers, D.M.2
-
16
-
-
0025228644
-
Determination of the extent of DNA bending by an adenine-thymine tract
-
Koo H.-S., Drak J., Rice J. A., Crothers D. M. Determination of the extent of DNA bending by an adenine-thymine tract. Biochemistry. 29:1990;4227-4234.
-
(1990)
Biochemistry
, vol.29
, pp. 4227-4234
-
-
Koo, H.-S.1
Drak, J.2
Rice, J.A.3
Crothers, D.M.4
-
17
-
-
0023333893
-
Lac repressor forms loops with linear DNA carrying two suitably spaced lac operators
-
Krämer H., Niemöller M., Amouyal M., Revet B., von Wilcken-Bergmann B., Müller-Hill B. lac repressor forms loops with linear DNA carrying two suitably spaced lac operators. EMBO J. 6:1987;1481-1491.
-
(1987)
EMBO J.
, vol.6
, pp. 1481-1491
-
-
Krämer, H.1
Niemöller, M.2
Amouyal, M.3
Revet, B.4
Von Wilcken-Bergmann, B.5
Müller-Hill, B.6
-
18
-
-
2142855754
-
DNA supercoiling changes the spacing requirement of two lac operators for DNA loop formation with lac repressor
-
Krämer H., Amouyal M., Nordheim A., Müller-Hill B. DNA supercoiling changes the spacing requirement of two lac operators for DNA loop formation with lac repressor. EMBO J. 7:1988;547-556.
-
(1988)
EMBO J.
, vol.7
, pp. 547-556
-
-
Krämer, H.1
Amouyal, M.2
Nordheim, A.3
Müller-Hill, B.4
-
20
-
-
0029938053
-
Crystal structure of the lactose operon repressor and its complexes with DNA and inducer
-
Lewis M., Chang G., Horton N. C., Kercher M. A., Pace H. C., Schumacher M. A., Brennan R. G., Lu P. Crystal structure of the lactose operon repressor and its complexes with DNA and inducer. Science. 271:1996;1247-1254.
-
(1996)
Science
, vol.271
, pp. 1247-1254
-
-
Lewis, M.1
Chang, G.2
Horton, N.C.3
Kercher, M.A.4
Pace, H.C.5
Schumacher, M.A.6
Brennan, R.G.7
Lu, P.8
-
21
-
-
0025202249
-
DNA looping and unlooping by AraC protein
-
Lobell R. B., Schleif R. F. DNA looping and unlooping by AraC protein. Science. 250:1990;528-532.
-
(1990)
Science
, vol.250
, pp. 528-532
-
-
Lobell, R.B.1
Schleif, R.F.2
-
22
-
-
0026092358
-
AraC-DNA looping: Orientation and distance-dependent loop breaking by the cyclic AMP receptor protein
-
Lobell R. B., Schleif R. F. AraC-DNA looping: orientation and distance-dependent loop breaking by the cyclic AMP receptor protein. J. Mol. Biol. 218:1991;45-54.
-
(1991)
J. Mol. Biol.
, vol.218
, pp. 45-54
-
-
Lobell, R.B.1
Schleif, R.F.2
-
23
-
-
0024340762
-
DNA looping generated by DNA bending protein IHF and the two domains of lambda integrase
-
Moitoso de Vargas L., Kim S., Landy A. DNA looping generated by DNA bending protein IHF and the two domains of lambda integrase. Science. 244:1989;1457-1461.
-
(1989)
Science
, vol.244
, pp. 1457-1461
-
-
Moitoso De Vargas, L.1
Kim, S.2
Landy, A.3
-
24
-
-
0029975889
-
Repression of lac promoter as a function of distance, phase and quality of an auxiliary lac operator
-
Müller J., Oehler S., Müller-Hill B. Repression of lac promoter as a function of distance, phase and quality of an auxiliary lac operator. J. Mol. Biol. 257:1996;21-29.
-
(1996)
J. Mol. Biol.
, vol.257
, pp. 21-29
-
-
Müller, J.1
Oehler, S.2
Müller-Hill, B.3
-
25
-
-
0030998034
-
Protein-induced fit: The CRP activator protein changes sequence-specific DNA recognition by the CytR repressor, a highly flexible LacI member
-
Pedersen H., Valentin-Hansen P. Protein-induced fit: the CRP activator protein changes sequence-specific DNA recognition by the CytR repressor, a highly flexible LacI member. EMBO J. 16:1997;2108-2118.
-
(1997)
EMBO J.
, vol.16
, pp. 2108-2118
-
-
Pedersen, H.1
Valentin-Hansen, P.2
-
26
-
-
0030448621
-
Technical comment: DNA looping and Lac repressor-CAP interaction
-
Perros M., Steitz T. A. Technical comment: DNA looping and Lac repressor-CAP interaction. Science. 274:1996;1929-1930.
-
(1996)
Science
, vol.274
, pp. 1929-1930
-
-
Perros, M.1
Steitz, T.A.2
-
27
-
-
0022447855
-
Gene regulation by proteins acting nearby and at a distance
-
Ptashne M. Gene regulation by proteins acting nearby and at a distance. Nature. 322:1986;697-701.
-
(1986)
Nature
, vol.322
, pp. 697-701
-
-
Ptashne, M.1
-
28
-
-
0028801067
-
Action at a distance: DNA-looping and initiation of transcription
-
Rippe K., von Hippel P. H., Langowski J. Action at a distance: DNA-looping and initiation of transcription. Trends Biochem. Sci. 20:1995;500-506.
-
(1995)
Trends Biochem. Sci.
, vol.20
, pp. 500-506
-
-
Rippe, K.1
Von Hippel, P.H.2
Langowski, J.3
-
29
-
-
0031002095
-
Conformation of Lac repressor tetramer in solution, bound and unbound to operator DNA
-
Ruben G. C., Roos T. B. Conformation of Lac repressor tetramer in solution, bound and unbound to operator DNA. Microsc. Res. Tech. 36:1997;400-416.
-
(1997)
Microsc. Res. Tech.
, vol.36
, pp. 400-416
-
-
Ruben, G.C.1
Roos, T.B.2
-
30
-
-
0027459196
-
A nucleosome-dependent static loop potentiates estrogen-regulated transcription from the Xenopus vitellogenin B1 promoter in vitro
-
Schild C., Claret F.-X., Wahli W., Wolffe A. P. A nucleosome-dependent static loop potentiates estrogen-regulated transcription from the Xenopus vitellogenin B1 promoter in vitro. EMBO J. 12:1993;423-433.
-
(1993)
EMBO J.
, vol.12
, pp. 423-433
-
-
Schild, C.1
Claret, F.-X.2
Wahli, W.3
Wolffe, A.P.4
-
33
-
-
0029927848
-
The mechanism of CAP-lac repressor binding cooperativity at the E. coli lactose promoter
-
Vossen K. M., Stickle D. F., Fried M. G. The mechanism of CAP-lac repressor binding cooperativity at the E. coli lactose promoter. J. Mol. Biol. 255:1996;44-54.
-
(1996)
J. Mol. Biol.
, vol.255
, pp. 44-54
-
-
Vossen, K.M.1
Stickle, D.F.2
Fried, M.G.3
-
34
-
-
0023665196
-
Influence of supercoiling and sequence context on operator DNA binding with lac repressor
-
Whitson P. A., Hsieh W.-T., Wells R. D., Matthews K. S. Influence of supercoiling and sequence context on operator DNA binding with lac repressor. J. Biol. Chem. 262:1987;14592-14599.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 14592-14599
-
-
Whitson, P.A.1
Hsieh, W.-T.2
Wells, R.D.3
Matthews, K.S.4
-
35
-
-
0019867850
-
Diffusion-driven mechanisms of protein translocation on nucleic acids. 3. The Escherichia coli lac repressor-operator interaction: Kinetic measurements and conclusions
-
Winter R. B., Berg O. G., von Hippel P. H. Diffusion-driven mechanisms of protein translocation on nucleic acids. 3. The Escherichia coli lac repressor-operator interaction: kinetic measurements and conclusions. Biochemistry. 20:1981;6961-6977.
-
(1981)
Biochemistry
, vol.20
, pp. 6961-6977
-
-
Winter, R.B.1
Berg, O.G.2
Von Hippel, P.H.3
-
36
-
-
0025816158
-
DNA looping alters local DNA conformation during transcription
-
Wu H.-Y., Liu L. F. DNA looping alters local DNA conformation during transcription. J. Mol. Biol. 219:1991;615-622.
-
(1991)
J. Mol. Biol.
, vol.219
, pp. 615-622
-
-
Wu, H.-Y.1
Liu, L.F.2
|