The calcium binding site in cytochrome aa3 from Paracoccus denitrificans

Biochemistry

Volumn 38, Issue 33, 1999, Pages 10670-10677

  Riistama, Sirpa ^a   Laakkonen, Liisa ^a   Wikström, Mårten ^a   Verkhovsky, Michael I ^a   Puustinen, Anne ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME C OXIDASE;

ARTICLE; BINDING SITE; CALCIUM BINDING; CHEMICAL INTERACTION; METAL BINDING; NONHUMAN; PARACOCCUS DENITRIFICANS; PRIORITY JOURNAL; PROTON TRANSPORT; SITE DIRECTED MUTAGENESIS;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; BINDING SITES; CALCIUM; ELECTRON TRANSPORT COMPLEX IV; HEME; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; PARACOCCUS DENITRIFICANS; PROTEIN STRUCTURE, SECONDARY; SPECTROPHOTOMETRY;

BACTERIA (MICROORGANISMS); MAMMALIA; PARACOCCUS DENITRIFICANS;

EID: 0033578348     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi990885v     Document Type: Article

References (33)

1. Babcock, G. T., and Wikström, M. (1992) Nature 356, 301-309.
2. Tsukihara, T., Aoyama, H., Yamashita, E., Tomizaki, T., Yamaguchi, H., Shinzawa-Itoh, K., Nakashima, R., Yaono, R., and Yoshikawa, S. (1995) Science 269, 1069-1074.
3. Wikström, M. K. F., and Saris, N. E. L. (1970) in Electron Transport and Energy Conservation (Tager, J. M., Papa, S., Quagliariello, E., and Slater, E. C., Eds.) pp 77-88, Adriatica Editrice, Bari, Italy.
4. Wikström, M. K. F. (1972) Biochim. Biophys. Acta 283, 385-390.
5. Wikström, M. K. F. (1974) Ann. N.Y. Acad. Sci. 227, 146-158.
6. Wikström, M. K. F., and Saari, H. (1975) Biochim. Biophys. Acta 408, 170-179.
7. Saari, H., Penttilä, T., and Wikström, M. (1980) J. Bioenerg. Biomembr. 12, 325-338.
8. Wikström, M. K. F., and Saari, H. (1976) Mol. Cell Biochem. 11, 17-33.
9. Mkrtchyan, H., Vygodina, T., and Konstantinov, A. (1990) Biochem. Int. 20, 183-190.
10. Ostermeier, C., Harrenga, A., Ermler, U., and Michel, H. (1997) Proc. Natl. Acad. Sci. U.S.A. 94, 10547-10553.
11. Yoshikawa, S., Shinzawa-Itoh, K., Nakashima, R., Yaono, R., Yamashita, E., Inoue, N., Yao, M., Jie Fei, M., Peters Libeu, C., Mizushima, T., Yamaguchi, H., Tomizaki, T., and Tsukihara, T. (1998) Science 280, 1723-1729.
12. Kirichenko, A., Vygodina, T., Mkrtchyan, H. M., and Konstantinov, A. (1998) FEBS Lett. 423, 329-333.
13. Vandeyar, M., Weiner, M., Hutton, C., and Batt, C. (1988) Gene 65, 129-133.
14. Raitio, M., Pispa, J. M., Metso, T., and Saraste, M. (1990) FEBS Lett. 261, 431-435.
15. Kovach, M. E., Phillips, R. W., Elzer, P. H., Roop, R. M., and Peterson, K. M. (1994) BioTechniques 16, 800-802.
16. Pfitzner, U., Odenwald, A., Ostermann, T., Weingard, L., Ludwig, B., and Richter, O.-M. H. (1998) J. Bioenerg. Biomembr. 30, 89-97.
17. Chang, J. P., and Morris, J. G. (1962) J. Gen. Microbiol. 29, 301-310.
18. Berry, E. A., and Trumpower, B. L (1985) J. Biol. Chem. 260, 2458-2467.
19. Puustinen, A., Finel, M., Virkki, M., and Wikström, M. (1989) FEBS Lett. 249, 163-167.
20. Ludwig, B., and Schatz, G. (1980) Proc. Natl. Acad. Sci. U.S.A. 77, 196-200.
21. Verkhovskaya, M. L., Verkhovsky, M. I., and Wikström, M. (1996) FEBS Lett. 388, 217-218.
22. Kabsch, W., and Sander, C. (1983) Biopolymers 22, 2577-2637.
23. Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994) Nucleic Acids Res. 22, 4673-4680.
24. Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman D. J. (1997) Nucleic Acids Res. 25, 3389-3402.
25. Bairoch, A., and Apweiler, R. (1999) Nucleic Acids Res. 27, 49-54.
26. Benson, D. A., Boguski, M. S., Lipman, D. J., Ostell, J., and Ouellette, B. F. (1998) Nucleic Acids Res. 26, 1-7.
27. Brooks, B. R., Bruccoleri, R. E., Olafson, B. D., States, D. J., Swaminathan, S., and Karplus, M. (1983) J. Comput. Chem. 4, 187-217.
28. Abola, E. E., Sussman, J. L., Prilusky, J., and Manning, N. O. (1997) Methods Enzymol. 277, 556-571.
29. Sussman, J. L., Lin, D., Jiang, J., Manning, N. O., Prilusky, J., Ritter, O., and Abola, E. E. (1998) Acta Crystallogr. D54, 1078-1084.
30. Kannt, A., Lancaster, C. R. D., and Michel, H. (1998) Biophys. J. 74, 708-721.
31. Puustinen, A., and Wikström, M. (1999) Proc. Natl Acad. Sci. U.S.A. 96, 35-37.
32. Babcock, G. T., and Callahan, P. M. (1983) Biochemistry 22, 2314-2319.
33. Verkhovskaya, M., Verkhovsky, M., and Wikström, M. (1992) J. Biol. Chem. 267, 14559-14562.