메뉴 건너뛰기




Volumn 18, Issue 16, 1999, Pages 4571-4578

tRNA prefers to kiss

Author keywords

In vitro selection; Kissing complex; RNA stem loop; RNA RNA interactions; tRNA

Indexed keywords

PHENYLALANINE TRANSFER RNA; TRANSFER RNA;

EID: 0033575733     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/18.16.4571     Document Type: Article
Times cited : (48)

References (46)
  • 1
    • 0029822046 scopus 로고    scopus 로고
    • A curved RNA helix incorporating an internal loop with G•A and A•A non-Watson-crick base pairing
    • Baeyens, K.J., De Bondt, H.L., Pardi, A. and Holbrook, S.R. (1996) A curved RNA helix incorporating an internal loop with G•A and A•A non-Watson-Crick base pairing. Proc. Natl Acad. Sci. USA, 93, 12851-12855.
    • (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 12851-12855
    • Baeyens, K.J.1    De Bondt, H.L.2    Pardi, A.3    Holbrook, S.R.4
  • 4
    • 0028105601 scopus 로고
    • The 2.9 Å crystal structure of T. Thermophilus seryl-tRNA synthetase complexed with tRNA (ser)
    • Biou, V., Yaremchuk, A., Tukalo, M. and Cusack, S. (1994) The 2.9 Å crystal structure of T. thermophilus seryl-tRNA synthetase complexed with tRNA (Ser). Science, 263, 1404-1410.
    • (1994) Science , vol.263 , pp. 1404-1410
    • Biou, V.1    Yaremchuk, A.2    Tukalo, M.3    Cusack, S.4
  • 5
    • 0017646646 scopus 로고
    • Binding of ribosomal proteins to RNA covalently coupled to agarose
    • Burrell, H.R. and Horowitz, J. (1977) Binding of ribosomal proteins to RNA covalently coupled to agarose. Eur. J. Biochem., 75, 533-544.
    • (1977) Eur. J. Biochem. , vol.75 , pp. 533-544
    • Burrell, H.R.1    Horowitz, J.2
  • 7
    • 0031591383 scopus 로고    scopus 로고
    • The structure of an RNA 'kissing' hairpin complex of the HIV TAR hairpin loop and its complement
    • Chang, K.Y. and Tinoco, I., Jr (1997) The structure of an RNA 'kissing' hairpin complex of the HIV TAR hairpin loop and its complement. J. Mol. Biol., 269, 52-66.
    • (1997) J. Mol. Biol. , vol.269 , pp. 52-66
    • Chang, K.Y.1    Tinoco I., Jr.2
  • 10
    • 0022438048 scopus 로고
    • Phe as sensed by the fluorescence of wybutine
    • Phe as sensed by the fluorescence of wybutine. Eur. Biophys. J., 13, 331-342.
    • (1986) Eur. Biophys. J. , vol.13 , pp. 331-342
    • Claesens, F.1    Rigler, R.2
  • 11
    • 0032531696 scopus 로고    scopus 로고
    • Mapping of a protein-RNA kissing hairpin interface: Rom and Tar-Tar*
    • Comolli, L.R., Pelton, J.G. and Tinoco, I., Jr (1998) Mapping of a protein-RNA kissing hairpin interface: Rom and Tar-Tar*. Nucleic Acids Res., 26, 4688-4695.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 4688-4695
    • Comolli, L.R.1    Pelton, J.G.2    Tinoco I., Jr.3
  • 12
    • 0027173323 scopus 로고
    • Three small ribooligonucleotides with specific arginine sites
    • Connell, G.J., Illangesekare, M. and Yarus, M. (1993) Three small ribooligonucleotides with specific arginine sites. Biochemistry, 32, 5497-5502.
    • (1993) Biochemistry , vol.32 , pp. 5497-5502
    • Connell, G.J.1    Illangesekare, M.2    Yarus, M.3
  • 13
    • 0030959348 scopus 로고    scopus 로고
    • Rules for RNA recognition of GNRA tetraloops deduced by in vitro selection: Comparison with in vivo evolution
    • Costa, M. and Michel, F. (1997) Rules for RNA recognition of GNRA tetraloops deduced by in vitro selection: comparison with in vivo evolution. EMBO J., 16, 3289-3302.
    • (1997) EMBO J. , vol.16 , pp. 3289-3302
    • Costa, M.1    Michel, F.2
  • 14
    • 0032146203 scopus 로고    scopus 로고
    • Solution studies of the dimerization initiation site of HIV-1 genomic RNA
    • Dardel, F., Marquet, R., Ehresmann, C., Ehresmann, B. and Blanquet, S. (1998) Solution studies of the dimerization initiation site of HIV-1 genomic RNA. Nucleic Acids Res., 26, 3567-3571.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 3567-3571
    • Dardel, F.1    Marquet, R.2    Ehresmann, C.3    Ehresmann, B.4    Blanquet, S.5
  • 15
    • 0007972388 scopus 로고
    • RNA structure, not sequence, determines the 5′ splice-site specificity of a group I intron
    • Doudna, J.A., Cormack, B.P. and Szostak, J.W. (1989) RNA structure, not sequence, determines the 5′ splice-site specificity of a group I intron. Proc. Natl Acad. Sci. USA, 86, 7402-7406.
    • (1989) Proc. Natl Acad. Sci. USA , vol.86 , pp. 7402-7406
    • Doudna, J.A.1    Cormack, B.P.2    Szostak, J.W.3
  • 16
    • 0025861307 scopus 로고
    • Complexes formed by complementary RNA stem-loops. Their formations, structures and interaction with Co1E1 Rom protein
    • Eguchi, Y. and Tomizawa, J. (1991) Complexes formed by complementary RNA stem-loops. Their formations, structures and interaction with Co1E1 Rom protein. J. Mol. Biol., 220, 831-842.
    • (1991) J. Mol. Biol. , vol.220 , pp. 831-842
    • Eguchi, Y.1    Tomizawa, J.2
  • 17
    • 0015290262 scopus 로고
    • Activity of ribosomes containing 5S RNA with a chemically modified 3′-terminus
    • Fahnestock, S.R. and Nomura, M. (1972) Activity of ribosomes containing 5S RNA with a chemically modified 3′-terminus. Proc. Natl Acad. Sci. USA, 69, 363-365.
    • (1972) Proc. Natl Acad. Sci. USA , vol.69 , pp. 363-365
    • Fahnestock, S.R.1    Nomura, M.2
  • 20
    • 0027053086 scopus 로고
    • Selection of a ribozyme that functions as a superior template in a self-copying reaction
    • Green, R. and Szostak, J.W. (1992) Selection of a ribozyme that functions as a superior template in a self-copying reaction. Science, 258, 1910-1915.
    • (1992) Science , vol.258 , pp. 1910-1915
    • Green, R.1    Szostak, J.W.2
  • 21
    • 0027958767 scopus 로고
    • In vitro genetic analysis of the hinge region between helical elements P5-P4-P6 and P7-P3-P8 in the sunY group I self-splicing intron
    • Green, R. and Szostak, J.W. (1994) In vitro genetic analysis of the hinge region between helical elements P5-P4-P6 and P7-P3-P8 in the sunY group I self-splicing intron. J. Mol. Biol., 235, 140-155.
    • (1994) J. Mol. Biol. , vol.235 , pp. 140-155
    • Green, R.1    Szostak, J.W.2
  • 22
    • 0002705527 scopus 로고
    • In vitro genetic analysis: Selection and amplification of rare functional nucleic acids
    • Green, R., Ellington, A.D., Bartel, D.P. and Szostak, J.W. (1991) In vitro genetic analysis: selection and amplification of rare functional nucleic acids. Methods Enzymol., 2, 75-86.
    • (1991) Methods Enzymol. , vol.2 , pp. 75-86
    • Green, R.1    Ellington, A.D.2    Bartel, D.P.3    Szostak, J.W.4
  • 23
    • 0029058784 scopus 로고
    • Determinants of RNA hairpin loop-loop complex stability
    • Gregorian, R.S., Jr and Crothers, D.M. (1995) Determinants of RNA hairpin loop-loop complex stability. J. Mol. Biol., 248, 968-984.
    • (1995) J. Mol. Biol. , vol.248 , pp. 968-984
    • Gregorian R.S., Jr.1    Crothers, D.M.2
  • 24
    • 0017165207 scopus 로고
    • Studies of the complex between transfer RNAs with complementary anticodons
    • Grosjean, H., Soll, D.G. and Crothers, D.M. (1976) Studies of the complex between transfer RNAs with complementary anticodons. J. Mol. Biol., 103, 499-519.
    • (1976) J. Mol. Biol. , vol.103 , pp. 499-519
    • Grosjean, H.1    Soll, D.G.2    Crothers, D.M.3
  • 27
    • 0030596092 scopus 로고    scopus 로고
    • A network of heterogeneous hydrogen bonds in GNRA tetraloops
    • Jucker, F.M., Heus, H.A., Yip, P.F., Moors, E.H. and Pardi, A. (1996) A network of heterogeneous hydrogen bonds in GNRA tetraloops. J. Mol. Biol., 264, 968-980.
    • (1996) J. Mol. Biol. , vol.264 , pp. 968-980
    • Jucker, F.M.1    Heus, H.A.2    Yip, P.F.3    Moors, E.H.4    Pardi, A.5
  • 28
    • 0003126296 scopus 로고
    • Phe and general structural features of other tRNAs
    • Schimmel, P.R. (ed.), Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
    • Phe and general structural features of other tRNAs. In Schimmel, P.R. (ed.), Transfer RNA: Structure, Properties and Recognition. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, pp. 83-100.
    • (1979) Transfer RNA: Structure, Properties and Recognition , pp. 83-100
    • Kim, S.H.1
  • 29
    • 0022431461 scopus 로고
    • Mechanism of codon recognition by transfer RNA studied with oligonucleotides larger than triplets
    • Labuda, D., Striker, G., Grosjean, H. and Porschke, D. (1985) Mechanism of codon recognition by transfer RNA studied with oligonucleotides larger than triplets. Nucleic Acids Res., 13, 3667-3683.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 3667-3683
    • Labuda, D.1    Striker, G.2    Grosjean, H.3    Porschke, D.4
  • 30
    • 0032528951 scopus 로고    scopus 로고
    • Mechanism of codon recognition by transfer RNA studied with oligonucleotides larger than triplets
    • Lee, A.J. and Crothers, D.M. (1998) Mechanism of codon recognition by transfer RNA studied with oligonucleotides larger than triplets. Structure, 6, 993-1005.
    • (1998) Structure , vol.6 , pp. 993-1005
    • Lee, A.J.1    Crothers, D.M.2
  • 31
    • 0023651444 scopus 로고
    • Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates
    • Milligan, J.F., Groebe, D.R., Witherell, G.W. and Uhlenbeck, O.C. (1987) Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucleic Acids Res., 15, 8783-8798.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 8783-8798
    • Milligan, J.F.1    Groebe, D.R.2    Witherell, G.W.3    Uhlenbeck, O.C.4
  • 34
    • 0022845689 scopus 로고
    • RNA catalysis and the origins of life
    • Orgel, L.E. (1986) RNA catalysis and the origins of life. J. Theor. Biol., 123, 127-149.
    • (1986) J. Theor. Biol. , vol.123 , pp. 127-149
    • Orgel, L.E.1
  • 36
    • 0028063567 scopus 로고
    • Three-dimensional structure of a hammerhead ribozyme
    • Pley, H.W., Flaherty, K.M. and McKay, D.B. (1994) Three-dimensional structure of a hammerhead ribozyme. Nature, 372, 68-74.
    • (1994) Nature , vol.372 , pp. 68-74
    • Pley, H.W.1    Flaherty, K.M.2    McKay, D.B.3
  • 37
    • 0023424957 scopus 로고
    • A synthetic substrate for tRNA splicing
    • Reyes, V.M. and Abelson, J. (1987) A synthetic substrate for tRNA splicing. Anal. Biochem., 166, 90-95.
    • (1987) Anal. Biochem. , vol.166 , pp. 90-95
    • Reyes, V.M.1    Abelson, J.2
  • 39
    • 0027146665 scopus 로고
    • Structure of (rGGCGAGCC)2 in solution from NMR and restrained molecular dynamics
    • SantaLucia, J., Jr and Turner, D.H. (1993) Structure of (rGGCGAGCC)2 in solution from NMR and restrained molecular dynamics. Biochemistry, 32, 12612-12623.
    • (1993) Biochemistry , vol.32 , pp. 12612-12623
    • SantaLucia J., Jr.1    Turner, D.H.2
  • 40
    • 0029073091 scopus 로고
    • The crystal structure of an all-RNA hammerhead ribozyme: A proposed mechanism for RNA catalytic cleavage
    • Scott, W.G., Finch, J.T. and Klug, A. (1995) The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage. Cell, 81, 991-1002.
    • (1995) Cell , vol.81 , pp. 991-1002
    • Scott, W.G.1    Finch, J.T.2    Klug, A.3
  • 42
    • 0031761536 scopus 로고    scopus 로고
    • HIV-1 A-rich RNA loop mimics the tRNA anticodon structure
    • Viani Puglisi, E. and Puglisi, J.D. (1998) HIV-1 A-rich RNA loop mimics the tRNA anticodon structure. Nature Struct. Biol., 5, 1033-1036.
    • (1998) Nature Struct. Biol. , vol.5 , pp. 1033-1036
    • Viani Puglisi, E.1    Puglisi, J.D.2
  • 43
    • 0028228803 scopus 로고
    • Selection of novel forms of a functional domain within the Tetrahymena ribozyme
    • Williams, K.P., Imahori, H., Fujimoto, D.N. and Inoue, T. (1994) Selection of novel forms of a functional domain within the Tetrahymena ribozyme. Nucleic Acids Res., 22, 2003-2009.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 2003-2009
    • Williams, K.P.1    Imahori, H.2    Fujimoto, D.N.3    Inoue, T.4
  • 44
    • 0029744135 scopus 로고    scopus 로고
    • Solution structure of (rGCGGACGC)2 by two-dimensional NMR and the iterative relaxation matrix approach
    • Wu, M. and Turner, D.H. (1996) Solution structure of (rGCGGACGC)2 by two-dimensional NMR and the iterative relaxation matrix approach. Biochemistry, 35, 9677-9689.
    • (1996) Biochemistry , vol.35 , pp. 9677-9689
    • Wu, M.1    Turner, D.H.2
  • 45
    • 0028817431 scopus 로고
    • Substrate recognition by human RNase P: Identification of small, model substrates for the enzyme
    • Yuan, Y. and Altman, S. (1995) Substrate recognition by human RNase P: identification of small, model substrates for the enzyme. EMBO J., 14, 159-168.
    • (1995) EMBO J. , vol.14 , pp. 159-168
    • Yuan, Y.1    Altman, S.2
  • 46
    • 0024477261 scopus 로고
    • On finding all suboptimal foldings of an RNA molecule
    • Zuker, M. (1989) On finding all suboptimal foldings of an RNA molecule. Science, 244, 48-52.
    • (1989) Science , vol.244 , pp. 48-52
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.