RED1 is necessary for phytochrome B-mediated red light-specific signal transduction in arabidopsis

Plant Cell

Volumn 9, Issue 5, 1997, Pages 731-743

  Wagner, Doris ^a   Hoecker, Ute ^b   Quail, Peter H ^b  

^a CALIFORNIA INSTITUTE OF TECHNOLOGY   (United States)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS;

EID: 0031131584     PISSN: 10404651     EISSN: None     Source Type: Journal    
DOI: 10.1105/tpc.9.5.731     Document Type: Article

References (62)

1. Ahmad, M., and Cashmore, A.R. (1993). HY4 gene of A. thaliana encodes a protein with characteristics of a blue-light photoreceptor. Nature 366, 162-166.
2. Ahmad, M., and Cashmore, A.R. (1996). The pef mutants of Arabidopsis thaliana define lesions early in the phytochrome signaling pathway. Plant J. 10, 1103-1110.
3. Ang, L.-H., and Deng, X.-W. (1994). Regulatory hierarchy of photomorphogenic loci: Allele-specific and light-dependent interaction between the HY5 and COP1 loci. Plant Cell 6, 613-628.
4. Barnes, S.A., Quaggio, R.B., and Chua, N.-H. (1995). Phytochrome signal transduction: Characterization of pathways and isolation of mutants. Philos. Trans. R. Soc. Lond. B Biol. Sci. 350, 67-74.
5. Barnes, W.M. (1994). PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates. Proc. Natl. Acad. Sci. USA 91, 2216-2220.
6. Bell, C.J., and Ecker, J.R. (1994). Assignments of 30 microsatellite loci to the linkage map of Arabidopsis. Genomics 19, 137-144.
7. Boylan, M., Douglas, N., and Quail, P.H. (1994). Dominant negative suppression of Arabidopsis photoresponses by mutant phytochrome A sequences identifies spatially discrete regulatory domains in the photoreceptor. Plant Cell 6, 449-460.
8. Castle, L.A., and Meinke, D.W. (1994). A FUSCA gene of Arabidopsis encodes a novel protein essential for plant development. Plant Cell 6, 25-41.
9. Cherry, J.R., Hondred, D., Walker, J.M., and Vierstra, R.D. (1992). Phytochrome requires the 6-kDa N-terminal domain for full biological activity. Proc. Natl. Acad. Sci. USA 89, 5039-5043.
10. Cherry, J.R., Hondred, D., Walker, J.M., Keller, J.M., Hershey, H.P., and Vierstra, R.D. (1993). Carboxy-terminal deletion analysis of oat phytochrome A reveals the presence of separate domains required for structure and biological activity. Plant Cell 5, 565-575.
11. Chory, J. (1993). Out of darkness - Mutants reveal pathways controlling light-regulated development in plants. Trends Genet. 9, 167-172.
12. Chory, J. (1994). Plant phototransduction - Phytochrome signal transduction. Curr. Biol. 4, 844-846.
13. Chory, J., Peto, C., Feinbaum, R., Pratt, L., and Ausubel, F. (1989). Arabidopsis thaliana mutant that develops as a light-grown plant in the absence of light. Cell 58, 991-999.
14. Chory, J., Reinecke, D., Sim, S., Washburn, T., and Brenner, M. (1994). A role for cytokinins in de-etiolation in Arabidopsis - det mutants have an altered response to cytokinins. Plant Physiol. 104, 339-347.
15. Clack, T., Mathews, S., and Sharrock, R.A. (1994). The phytochrome apoprotein family in Arabidopsis is encoded by five genes - The sequences and expression of phyD and phyE. Plant Mol. Biol. 25, 413-427.
16. Dehesh, K., Franci, C., Parks, B.M., Seeley, K.A., Short, T.W., Tepperman, J.M., and Quail, P.H. (1993). Arabidopsis HY8 locus encodes phytochrome A. Plant Cell 5, 1081-1088.
17. Deng, X.-W. (1994). Fresh view of light signal transduction in plants. Cell 76, 423-426.
18. Deng, X.-W., and Quail, P.H. (1992). Genetic and phenotypic characterization of cop1 mutants of Arabidopsis thaliana. Plant J. 2, 83-95.
19. Deng, X.-W., Caspar, T., and Quail, P.H. (1991). cop1: A regulatory locus involved in light-controlled development and gene expression in Arabidopsis. Genes Dev. 5, 1172-1182.
20. Deng, X.-W., Matsui, M., Wei, N., Wagner, D., Chu, A.M., Feldman, K.A., and Quail, P.H. (1992). COP1, an Arabidopsis regulatory gene, encodes a protein with a zinc-binding motif and a Gβ homologous domain. Cell 71, 791-801.
21. Edwards, K., Johnstone, C., and Thompson, C. (1991). A simple and rapid method for the preparation of plant genomic DNA for PCR analysis. Nucleic Acids Res. 19, 1349.
22. Halliday, K., Devlin, P.F., Whitelam, G.C., Hanhart, C., and Koornneef, M. (1996). The ELONGATED gene of Arabidopsis acts independently of light and gibberellins in the control of elongation growth. Plant J. 9, 305-312.
23. Kendrick, R.E., and Kronenberg, G.H.M., eds (1994). Photomorphogenesis in Plants, 2nd ed. (Dordrecht, The Netherlands: Kluwer Academic Publishers).
24. Kim, B.C., Soh, M.S., Kang, B.J., Furuya, M., and Nam, H.G. (1996). Two dominant photomorphogenic mutations of Arabidopsis thaliana identified as suppressor mutations of hy2. Plant J. 9, 441-456.
25. Konieczny, A., and Ausubel, F.M. (1993). A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers. Plant J. 4, 403-410.
26. Koornneef, M., and Stam, P. (1991). Genetic analysis. In Methods in Arabidopsis Research, C. Koncz, N.-H. Chua, and J. Schell, eds (Singapore: World Scientific), pp. 83-99.
27. Koornneef, M., Rolff, E., and Spruit, C. (1980). Genetic control of light-inhibited hypocotyl elongation in Arabidopsis thaliana (L.) Heynh. Z. Pflanzenphysiol. 100, 147-160.
28. Li, J., Nagpal, P., Vitart, V., McMorris, T.C., and Chory, J. (1996). A role for brassinosteroids in light-dependent development of Arabidopsis. Science 272, 398-401.
29. Lister, C., and Dean, C. (1993). Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana. Plant J. 4, 745-750.
30. McCormac, A.C., Cherry, J.R., Hershey, H.P., Vierstra, R.D., and Smith, H. (1991). Photoresponses of transgenic tobacco plants expressing an oat phytochrome gene. Planta 185, 162-170.
31. McCormac, A.C., Wagner, D., Boylan, M.T., Quail, P.H., and Smith, H. (1993). Photoresponses of transgenic Arabidopsis seedlings expressing introduced phytochrome B-encoding cDNAs: Evidence that phytochrome A and phytochrome B have distinct photoregulatory functions. Plant J. 4, 19-27.
32. Millar, A.J., McGrath, R.B., and Chua, N.-H. (1994). Phytochrome phototransduction pathways. Annu. Rev. Genet. 28, 325-349.
33. Nagatani, A., Chory, J., and Furuya, M. (1991). Phytochrome B is not detectable in the hy3 mutant of Arabidopsis, which is deficient in responding to end-of-day far-red light treatments. Plant Cell Physiol. 32, 1119-1122.
34. Nagatani, A., Reed, J.W., and Chory, J. (1993). Isolation and initial characterization of Arabidopsis mutants that are deficient in phytochrome A. Plant Physiol. 102, 269-277.
35. Neff, M.M., and Van Volkenburgh, E. (1994). Light-stimulated cotyledon expansion in Arabidopsis seedlings. Plant Physiol. 104, 1027-1032.
36. Parks, B.M., and Quail, P.H. (1991). Phytochrome-deficient hy1 and hy2 long hypocotyl mutants of Arabidopsis are defective in phytochrome chromophore biosynthesis. Plant Cell 3, 1177-1186.
37. Parks, B.M., and Quail, P.H. (1993). hy8, a new class of Arabidopsis long hypocotyl mutants deficient in functional phytochrome A. Plant Cell 5, 39-48.
38. Pepper, A., Delaney, T.P., and Chory, J. (1993). Genetic interaction in plant photomorphogenesis. Semin. Dev. Biol. 4, 15-22.
39. Pepper, A., Delaney, T., Washburn, T., Poole, D., and Chory, J. (1994). DET1, a negative regulator of light-mediated development and gene expression in Arabidopsis, encodes a novel nuclear-localized protein. Cell 78, 109-116.
40. Quail, P.H. (1994). Photosensory perception and signal transduction in plants. Curr. Opin. Genet. Dev. 4, 652-661.
41. Quail, P.H., Briggs, W.R., Chory, J., Hangarter, R.P., Harberd, N.P., Kendrick, R.E., Koornneef, M., Parks, B., Sharrock, R.A., Schafer, E., Thompson, W.F., and Whitelam, G.C. (1994). Spotlight on phytochrome nomenclature. Plant Cell 6, 468-471.
42. Quail, P.H., Boylan, M.T., Parks, B.M., Short, T.W., Xu, Y., and Wagner, D. (1995). Phytochromes: Photosensory perception and signal transduction. Science 268, 675-680.
43. Reed, J.W., and Chory, J. (1994). Mutational analysis of light-controlled seedling development in Arabidopsis. Semin. Cell Biol. 5, 327-334.
44. Reed, J.W., Nagpal, P., Poole, D.S., Furuya, M., and Chory, J. (1993). Mutations in the gene for the red/far-red light receptor phytochrome 8 alter cell elongation and physiological responses throughout Arabidopsis development. Plant Cell 5, 147-157.
45. Reed, J.W., Nagatani, A., Euch, T.D., Fagan, M., and Chory, J. (1994). Phytochrome A and phytochrome B have overlapping but distinct functions in Arabidopsis development. Plant Physiol. 104, 1139-1149.
46. Schmidt, R., West, J., Cnops, G., Love, K., Balestrazzi, A., and Dean, C. (1996). Detailed description of four YAC contigs representing 17 Mb of chromosome 4 of Arabidopsis thaliana ecotype Columbia. Plant J. 9, 755-765.
47. Sharrock, R.A., and Quail, P.H. (1989). Novel phytochrome sequences in Arabidopsis thaliana: Structure, evolution, and differential expression of a plant regulatory photoreceptor family. Genes Dev. 3, 1745-1757.
48. Smith, H. (1994). Sensing the light environment: The functions of the phytochrome family. In Photomorphogenesis in Plants, 2nd ed, R.E. Kendrick and G.H.M. Kronenberg, eds (Dordrecht, The Netherlands: Kluwer Academic Publishers), pp. 377-416.
49. Smith, H., Xu, Y., and Quail, P.H. (1997). Antagonistic, but complementary actions of phytochromes A and B allow optimum seedling de-etiolation. Plant Physiol. 114, in press.
50. Somers, D.E., Sharrock, R.A., Tepperman, J.M., and Quail, P.H. (1991). The hy3 long hypocotyl mutant of Arabidopsis is deficient in phytochrome B. Plant Cell 3, 1263-1274.
51. Szekeres, M., Németh, K., Koncz-Káláman, Z., Mathur, J., Kauschmann, A., Altmann, T., Rédei, G.P., Nagy, F., Schell, J., and Koncz, C. (1996). Brassinosteroids rescue the deficiency of CYP90, a cytochrome P450, controlling cell elongation and deetiolation in Arabidopsis. Cell 85, 171-182.
52. Takahashi, T., Gasch, A., Nishizawa, N., and Chua, N.-H. (1995). The DIMINUTO gene of Arabidopsis is involved in regulating cell elongation. Genes Dev. 9, 97-107.
53. Valvekens, D., Van Montagu, M., and Van Lijsebettens, M. (1988). Agrobacterium tumefeciens-mediated transformation of Arabidopsis thaliana root explants by using kanamycin selection. Proc. Natl. Acad. Sci. USA 85, 5536-5540.
54. Wagner, D., and Quail, P.H. (1995). Mutational analysis of phytochrome B identifies a small COOH terminal-domain region critical for regulatory activity. Proc. Natl. Acad. Sci. USA 92, 8596-8600.
55. Wagner, D., Tepperman, J.M., and Quail, P.H. (1991). Overexpression of phytochrome B induces a short hypocotyl phenotype in transgenic Arabidopsis. Plant Cell 3, 1275-1288.
56. 2-terminal domains of phytochromes A and B determine their photosensory specificity and differential light lability. Proc. Natl. Acad. Sci. USA 93, 4011-4015.
57. Wagner, D., Koloszvari, M., and Quail, P.H. (1996b). Two small spatially distinct regions of phytochrome B are required for efficient signaling rates. Plant Cell 8, 859-871.
58. Wei, N., Chamovitz, D.A., and Deng, X.-W. (1994). Arabidopsis COP9 is a component of a novel signaling complex mediating light control of development. Cell 78, 117-124.
59. Wester, L., Somers, D.E., Clack, T., and Sharrock, R.A. (1994). Transgenic complementation of the hy3 phytochrome B mutation and response to PHYB gene copy number in Arabidopsis. Plant J. 5, 261-272.
60. Whitelam, G.C., and Harberd, N.P. (1994). Action and function of phytochrome family members revealed through the study of mutant and transgenic plants. Plant Cell Environ. 17, 615-625.
61. Whitelam, G.C., Johnson, E., Peng, J., Carol, P., Anderson, M.L., Cowl, J.S., and Harberd, N.P. (1993). Phytochrome A null mutants of Arabidopsis display a wild-type phenotype in white light. Plant Cell 5, 757-768.
62. Xu, Y., Parks, B.M., Short, T.W., and Quail, P.H. (1995). Missense mutations define a restricted segment in the C-terminal domain of phytochrome A critical to its regulatory activity. Plant Cell 7, 1433-1443.