-
1
-
-
0029061894
-
NK-lysin, a novel effector peptide of cytotoxic T and NK cells. Structure and cDNA cloning of the porcine form, induction by interleukin 2, antibacterial and antitumour activity
-
Andersson, M et al. (1995) NK-lysin, a novel effector peptide of cytotoxic T and NK cells. Structure and cDNA cloning of the porcine form, induction by interleukin 2, antibacterial and antitumour activity. EMBO J., 14, 1615-1625.
-
(1995)
EMBO J.
, vol.14
, pp. 1615-1625
-
-
Andersson, M.1
-
2
-
-
0031920099
-
Crystal structure of human pepsinogen A
-
James, M.N.G. (ed.), Plenum Press, New York, NY
-
Bateman, K.S., Chernaia, M.M., Tarasova, N.I. and James, M.N.G. (1998) Crystal structure of human pepsinogen A. In James, M.N.G. (ed.), The Aspartic Proteinases. Plenum Press, New York, NY, pp. 259-263.
-
(1998)
The Aspartic Proteinases
, pp. 259-263
-
-
Bateman, K.S.1
Chernaia, M.M.2
Tarasova, N.I.3
James, M.N.G.4
-
3
-
-
18344415038
-
Crystallization, structure solution and initial refinement of plant cardosin-A
-
James, M.N.G. (ed.), Plenum Press, New York, NY
-
Bento, I. et al. (1998) Crystallization, structure solution and initial refinement of plant cardosin-A. In James, M.N.G. (ed.), The Aspartic Proteinases. Plenum Press, New York, NY, pp. 445-452.
-
(1998)
The Aspartic Proteinases
, pp. 445-452
-
-
Bento, I.1
-
4
-
-
0032924352
-
Crystal structure of the novel aspartic proteinase zymogen proplasmepsin II from Plasmodium falciparum
-
Bernstein, N.K., Cherney, M.M., Loetscher, H., Ridley, R.G. and James, M.N.G. (1999) Crystal structure of the novel aspartic proteinase zymogen proplasmepsin II from Plasmodium falciparum. Nature Struct. Biol., 6, 32-37.
-
(1999)
Nature Struct. Biol.
, vol.6
, pp. 32-37
-
-
Bernstein, N.K.1
Cherney, M.M.2
Loetscher, H.3
Ridley, R.G.4
James, M.N.G.5
-
5
-
-
0031918998
-
The aspartic proteinases - An historical overview
-
James, M.N.G. (ed.), Plenum Press, New York, NY
-
Blundell, T.L. (1998) The aspartic proteinases - an historical overview. In James, M.N.G. (ed.), The Aspartic Proteinases. Plenum Press, New York, NY, pp. 1-13.
-
(1998)
The Aspartic Proteinases
, pp. 1-13
-
-
Blundell, T.L.1
-
8
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project, Number 4 (1994) The CCP4 suite: programs for protein crystallography. Acta Crystallogr., D50, 760-763.
-
(1994)
Acta Crystallogr.
, vol.D50
, pp. 760-763
-
-
-
9
-
-
0001679473
-
ALIGN: A program to superimpose protein coordinates, accounting for insertions and deletions
-
Cohen, G.E. (1997) ALIGN: a program to superimpose protein coordinates, accounting for insertions and deletions. J. Appl. Crystallogr., 30, 1160-1161.
-
(1997)
J. Appl. Crystallogr.
, vol.30
, pp. 1160-1161
-
-
Cohen, G.E.1
-
10
-
-
0028387411
-
Isolation and characterization of a cDNA from flowers of Cynara cardunculus encoding cyprosin (an aspartic proteinase) and its use to study the organ-specific expression of cyprosin
-
Cordeiro, M.C., Xue, Z.-T., Pietrzak, M., Pais, M.S. and Brodelius, P.E. (1994) Isolation and characterization of a cDNA from flowers of Cynara cardunculus encoding cyprosin (an aspartic proteinase) and its use to study the organ-specific expression of cyprosin. Plant Mol. Biol., 24, 733-741.
-
(1994)
Plant Mol. Biol.
, vol.24
, pp. 733-741
-
-
Cordeiro, M.C.1
Xue, Z.-T.2
Pietrzak, M.3
Pais, M.S.4
Brodelius, P.E.5
-
11
-
-
0031023724
-
The glycosylation of the aspartic proteinases from barley (Hordeum vulgare L.) and cardoon (Cynara cardunculus L.)
-
Costa, J., Esteves, C.L., Faro, C.J., Kervinen, J., Pires, E., Verissimo, P., Wlodawer, A. and Carrondo, M.A. (1997) The glycosylation of the aspartic proteinases from barley (Hordeum vulgare L.) and cardoon (Cynara cardunculus L.). Eur. J. Biochem., 243, 695-700.
-
(1997)
Eur. J. Biochem.
, vol.243
, pp. 695-700
-
-
Costa, J.1
Esteves, C.L.2
Faro, C.J.3
Kervinen, J.4
Pires, E.5
Verissimo, P.6
Wlodawer, A.7
Carrondo, M.A.8
-
12
-
-
0025290527
-
The structure and function of the aspartic proteinases
-
Davies, D.R. (1990) The structure and function of the aspartic proteinases. Annu. Rev. Biophys. Biophys. Chem., 19, 189-215.
-
(1990)
Annu. Rev. Biophys. Biophys. Chem.
, vol.19
, pp. 189-215
-
-
Davies, D.R.1
-
13
-
-
0030736866
-
Splitting image
-
Dunn, B. (1997) Splitting image. Nature Struct. Biol., 4, 969-972.
-
(1997)
Nature Struct. Biol.
, vol.4
, pp. 969-972
-
-
Dunn, B.1
-
14
-
-
0011975439
-
Phases-95: A program package for the processing and analysis of diffraction data from macromolecules
-
Furey, W. and Swaminathan, S. (1995) Phases-95: a program package for the processing and analysis of diffraction data from macromolecules. Methods Enzymol., 276, 546-552.
-
(1995)
Methods Enzymol.
, vol.276
, pp. 546-552
-
-
Furey, W.1
Swaminathan, S.2
-
15
-
-
0032553435
-
Transport and activation of the vacuolar aspartic proteinase phytepsin in barley (Hordeum vulgare L.)
-
Glathe, S., Kervinen, J., Nimtz, M., Li, G.H., Tobin, G.J., Copeland, T.D., Ashford, D.A., Wlodawer, A. and Costa, J. (1998) Transport and activation of the vacuolar aspartic proteinase phytepsin in barley (Hordeum vulgare L.). J. Biol. Chem., 273, 31230-31236.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 31230-31236
-
-
Glathe, S.1
Kervinen, J.2
Nimtz, M.3
Li, G.H.4
Tobin, G.J.5
Copeland, T.D.6
Ashford, D.A.7
Wlodawer, A.8
Costa, J.9
-
16
-
-
0028108664
-
Comparative modeling of barley-grain aspartic proteinase: A structural rationale for observed hydrolytic specificity
-
Guruprasad, K., Tormakangas, K., Kervinen, J. and Blundell, T.L. (1994) Comparative modeling of barley-grain aspartic proteinase: a structural rationale for observed hydrolytic specificity. FEBS Lett., 352, 131-136.
-
(1994)
FEBS Lett.
, vol.352
, pp. 131-136
-
-
Guruprasad, K.1
Tormakangas, K.2
Kervinen, J.3
Blundell, T.L.4
-
17
-
-
0030878573
-
Caveolae, DIGs and the dynamics of sphingolipid-cholesterol microdomains
-
Harder, T. and Simons, K. (1997) Caveolae, DIGs and the dynamics of sphingolipid-cholesterol microdomains. Curr. Opin. Cell Biol., 9, 534-542.
-
(1997)
Curr. Opin. Cell Biol.
, vol.9
, pp. 534-542
-
-
Harder, T.1
Simons, K.2
-
18
-
-
0030993676
-
An aspartic endopeptidase is involved in the breakdown of propeptides of storage proteins in protein-storage vacuoles of plants
-
Hiraiwa, N., Kondo, M., Nishimura, M. and Hara-Nishimura, I. (1997) An aspartic endopeptidase is involved in the breakdown of propeptides of storage proteins in protein-storage vacuoles of plants. Eur. J. Biochem., 246, 133-141.
-
(1997)
Eur. J. Biochem.
, vol.246
, pp. 133-141
-
-
Hiraiwa, N.1
Kondo, M.2
Nishimura, M.3
Hara-Nishimura, I.4
-
19
-
-
0022643093
-
Molecular structure of an aspartic proteinase zymogen, porcine pepsinogen, at 1.8 Å resolution
-
James, M.N.G. and Sielecki, A.R. (1986) Molecular structure of an aspartic proteinase zymogen, porcine pepsinogen, at 1.8 Å resolution. Nature, 319, 33-38.
-
(1986)
Nature
, vol.319
, pp. 33-38
-
-
James, M.N.G.1
Sielecki, A.R.2
-
20
-
-
0027566415
-
Hydrolytic specificity of the barley grain aspartic proteinase
-
Kervinen, J., Sarkkinen, P., Kalkkinen, N., Mikola, L. and Saarma, M. (1993) Hydrolytic specificity of the barley grain aspartic proteinase. Phytochemistry, 32, 799-803.
-
(1993)
Phytochemistry
, vol.32
, pp. 799-803
-
-
Kervinen, J.1
Sarkkinen, P.2
Kalkkinen, N.3
Mikola, L.4
Saarma, M.5
-
21
-
-
0031956497
-
Molecular mechanisms for the conversion of zymogens to active proteolytic enzymes
-
Khan, A.R. and James, M.N.G. (1998) Molecular mechanisms for the conversion of zymogens to active proteolytic enzymes. Protein Sci., 7, 815-836.
-
(1998)
Protein Sci.
, vol.7
, pp. 815-836
-
-
Khan, A.R.1
James, M.N.G.2
-
22
-
-
0030811433
-
Structural characterization of activation 'intermediate 2' on the pathway to human gastricsin
-
Khan, A.R., Cherney, M.M., Tarasova, N.I. and James, M.N.G. (1997) Structural characterization of activation 'intermediate 2' on the pathway to human gastricsin. Nature Struct. Biol., 4, 1010-1015.
-
(1997)
Nature Struct. Biol.
, vol.4
, pp. 1010-1015
-
-
Khan, A.R.1
Cherney, M.M.2
Tarasova, N.I.3
James, M.N.G.4
-
23
-
-
0028296812
-
Multiple functions of pro-parts of aspartic proteinase zymogens
-
Koelsch, G., Mares, M., Metcalf, P. and Fusek, M. (1994) Multiple functions of pro-parts of aspartic proteinase zymogens. FEBS Lett., 343, 6-10.
-
(1994)
FEBS Lett.
, vol.343
, pp. 6-10
-
-
Koelsch, G.1
Mares, M.2
Metcalf, P.3
Fusek, M.4
-
24
-
-
0031670902
-
Conformational switching in an aspartic proteinase
-
Lee, A.Y., Gulnik, S.V. and Erickson, J.W. (1998) Conformational switching in an aspartic proteinase. Nature Struct. Biol., 5, 866-871.
-
(1998)
Nature Struct. Biol.
, vol.5
, pp. 866-871
-
-
Lee, A.Y.1
Gulnik, S.V.2
Erickson, J.W.3
-
25
-
-
0031253938
-
Saposin fold revealed by the NMR structure of NK-lysin
-
Liepinsh, E., Andersson, M., Ruysschaert, J.M. and Otting, G. (1997) Saposin fold revealed by the NMR structure of NK-lysin. Nature Struct. Biol., 4, 793-795.
-
(1997)
Nature Struct. Biol.
, vol.4
, pp. 793-795
-
-
Liepinsh, E.1
Andersson, M.2
Ruysschaert, J.M.3
Otting, G.4
-
26
-
-
0029169477
-
Differential localization of two acid proteinases in germinating barley (Hordeum vulgare) seed
-
Marttila, S., Jones, B.L. and Mikkonen, A. (1995) Differential localization of two acid proteinases in germinating barley (Hordeum vulgare) seed. Physiol. Plant, 93, 317-327.
-
(1995)
Physiol. Plant
, vol.93
, pp. 317-327
-
-
Marttila, S.1
Jones, B.L.2
Mikkonen, A.3
-
27
-
-
0031769454
-
Colocalization and complex formation between prosaposin and monosialoganglioside GM3 in neural cells
-
Misasi, R. et al. (1998) Colocalization and complex formation between prosaposin and monosialoganglioside GM3 in neural cells. J. Neurochem., 71, 2313-2321.
-
(1998)
J. Neurochem.
, vol.71
, pp. 2313-2321
-
-
Misasi, R.1
-
28
-
-
0028906365
-
Crystal and molecular structures of human progastricsin at 1.62 Å resolution
-
Moore, S.A., Sielecki, A.R., Chernaia, M.M., Tarasova, N.I. and James, M.N.G. (1995) Crystal and molecular structures of human progastricsin at 1.62 Å resolution. J. Mol. Biol., 247, 466-485.
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 466-485
-
-
Moore, S.A.1
Sielecki, A.R.2
Chernaia, M.M.3
Tarasova, N.I.4
James, M.N.G.5
-
29
-
-
0029126584
-
Saposin-like proteins (SAPLIP) carry out diverse functions on a common backbone structure
-
Munford, R.S., Sheppard, P.O. and O'Hara, P.J. (1995) Saposin-like proteins (SAPLIP) carry out diverse functions on a common backbone structure. J. Lipid Res., 36, 1653-1663.
-
(1995)
J. Lipid Res.
, vol.36
, pp. 1653-1663
-
-
Munford, R.S.1
Sheppard, P.O.2
O'Hara, P.J.3
-
30
-
-
0031225204
-
A novel protein with DNA binding activity from tobacco chloroplast nucleoids
-
Nakano, T., Murakami, S., Shoji, T., Yoshida, S., Yamada, Y. and Sato, F. (1997) A novel protein with DNA binding activity from tobacco chloroplast nucleoids. Plant Cell, 9, 1673-1682.
-
(1997)
Plant Cell
, vol.9
, pp. 1673-1682
-
-
Nakano, T.1
Murakami, S.2
Shoji, T.3
Yoshida, S.4
Yamada, Y.5
Sato, F.6
-
31
-
-
84920325457
-
An automated package for molecular replacement
-
Navaza, J. (1994) An automated package for molecular replacement. Acta Crystallogr., A50, 157-163.
-
(1994)
Acta Crystallogr.
, vol.A50
, pp. 157-163
-
-
Navaza, J.1
-
32
-
-
0032169928
-
Sorting of proteins to vacuoles in plant cells
-
Neuhaus, J.M. and Rogers, J.C. (1998) Sorting of proteins to vacuoles in plant cells. Plant Mol. Biol., 38, 127-144.
-
(1998)
Plant Mol. Biol.
, vol.38
, pp. 127-144
-
-
Neuhaus, J.M.1
Rogers, J.C.2
-
34
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski, Z. and Minor, W. (1997) Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol., 276, 307-326.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
35
-
-
0030014157
-
Plant cells contain two functionally distinct vacuolar compartments
-
Paris, N., Stanley, C.M., Jones, R.L. and Rogers, J.C. (1996) Plant cells contain two functionally distinct vacuolar compartments. Cell, 85, 563-572.
-
(1996)
Cell
, vol.85
, pp. 563-572
-
-
Paris, N.1
Stanley, C.M.2
Jones, R.L.3
Rogers, J.C.4
-
36
-
-
0029000740
-
Swaposins: Circular permutations within genes encoding saposin homologues
-
Ponting, C.P. and Russell, R.B. (1995) Swaposins: circular permutations within genes encoding saposin homologues. Trends Biochem. Sci., 20, 179-180.
-
(1995)
Trends Biochem. Sci.
, vol.20
, pp. 179-180
-
-
Ponting, C.P.1
Russell, R.B.2
-
37
-
-
0032127477
-
Identification and proteolytic processing of procardosin A
-
Ramalho-Santos, M., Verissimo, P., Cortes, L., Samyn, B., Van Beeumen, J., Pires, E. and Faro, C. (1998) Identification and proteolytic processing of procardosin A. Eur. J. Biochem., 255, 133-138.
-
(1998)
Eur. J. Biochem.
, vol.255
, pp. 133-138
-
-
Ramalho-Santos, M.1
Verissimo, P.2
Cortes, L.3
Samyn, B.4
Van Beeumen, J.5
Pires, E.6
Faro, C.7
-
38
-
-
0029004315
-
Families of aspartic peptidases and those of unknown catalytic mechanism
-
Rawlings, N.D. and Barrett, A.J. (1995) Families of aspartic peptidases and those of unknown catalytic mechanism. Methods Enzymol., 248, 105-120.
-
(1995)
Methods Enzymol.
, vol.248
, pp. 105-120
-
-
Rawlings, N.D.1
Barrett, A.J.2
-
39
-
-
0032126745
-
Phytepsin, a barley vacuolar aspartic proteinase, is highly expressed during autolysis of developing tracheary elements and sieve cells
-
Runeberg-Roos, P. and Saarma, M. (1998) Phytepsin, a barley vacuolar aspartic proteinase, is highly expressed during autolysis of developing tracheary elements and sieve cells. Plant J., 15, 139-145.
-
(1998)
Plant J.
, vol.15
, pp. 139-145
-
-
Runeberg-Roos, P.1
Saarma, M.2
-
40
-
-
0026321028
-
Primary structure of a barley-grain aspartic proteinase. A plant aspartic proteinase resembling mammalian cathepsin D
-
Runeberg-Roos, P., Tormakangas, K. and Ostman, A. (1991) Primary structure of a barley-grain aspartic proteinase. A plant aspartic proteinase resembling mammalian cathepsin D. Eur. J. Biochem., 202, 1021-1027.
-
(1991)
Eur. J. Biochem.
, vol.202
, pp. 1021-1027
-
-
Runeberg-Roos, P.1
Tormakangas, K.2
Ostman, A.3
-
41
-
-
0028425479
-
The aspartic proteinase of barley is a vacuolar enzyme that processes probarley lectin in vitro
-
Runeberg-Roos, P., Kervinen, J., Kovaleva, V., Raikhel, N.V. and Gal, S. (1994) The aspartic proteinase of barley is a vacuolar enzyme that processes probarley lectin in vitro. Plant Physiol., 105, 321-329.
-
(1994)
Plant Physiol.
, vol.105
, pp. 321-329
-
-
Runeberg-Roos, P.1
Kervinen, J.2
Kovaleva, V.3
Raikhel, N.V.4
Gal, S.5
-
42
-
-
0000082544
-
CHAIN - A crystallographic modeling program
-
Sack, J.S. (1988) CHAIN - a crystallographic modeling program. J. Mol. Graph., 6, 244-245.
-
(1988)
J. Mol. Graph.
, vol.6
, pp. 244-245
-
-
Sack, J.S.1
-
43
-
-
0026595547
-
Domain flexibility in aspartic proteinases
-
Sali, A., Veerapandian, B., Cooper, J.B., Moss, D.S., Hofmann, T. and Blundell, T.L. (1992) Domain flexibility in aspartic proteinases. Proteins, 12, 158-170.
-
(1992)
Proteins
, vol.12
, pp. 158-170
-
-
Sali, A.1
Veerapandian, B.2
Cooper, J.B.3
Moss, D.S.4
Hofmann, T.5
Blundell, T.L.6
-
44
-
-
0032544074
-
A putative vacuolar cargo receptor partially colocalizes with AtPEP12p on a prevacuolar compartment in Arabidopsis roots
-
Sanderfoot, A.A., Ahmed, S.U., Marty-Mazars, D., Rapoport, I., Kirchhausen, T., Marty, F. and Raikhel, N.V. (1998) A putative vacuolar cargo receptor partially colocalizes with AtPEP12p on a prevacuolar compartment in Arabidopsis roots. Proc. Natl Acad. Sci. USA, 95, 9920-9925.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 9920-9925
-
-
Sanderfoot, A.A.1
Ahmed, S.U.2
Marty-Mazars, D.3
Rapoport, I.4
Kirchhausen, T.5
Marty, F.6
Raikhel, N.V.7
-
45
-
-
0000296581
-
Aspartic proteinase from barley grains is related to mammalian lysosomal cathepsin D
-
Sarkkinen, P., Kalkkinen, N., Tilgmann, C., Siuro J., Kervinen, J. and Mikola, L. (1992) Aspartic proteinase from barley grains is related to mammalian lysosomal cathepsin D. Planta, 186, 317-323.
-
(1992)
Planta
, vol.186
, pp. 317-323
-
-
Sarkkinen, P.1
Kalkkinen, N.2
Tilgmann, C.3
Siuro, J.4
Kervinen, J.5
Mikola, L.6
-
46
-
-
0025768248
-
Refined structure of porcine pepsinogen at 1.8 Å resolution
-
Sielecki, A.R., Fujinaga, M., Read, R.J. and James, M.N. (1991) Refined structure of porcine pepsinogen at 1.8 Å resolution. J. Mol. Biol., 219, 671-692.
-
(1991)
J. Mol. Biol.
, vol.219
, pp. 671-692
-
-
Sielecki, A.R.1
Fujinaga, M.2
Read, R.J.3
James, M.N.4
-
47
-
-
0345692748
-
-
PhD Thesis. Institute of Biotechnology and Department of Biosciences, Division of Genetics, University of Helsinki, Finland
-
Tormakangas, K. (1997) Structure, expression and intracellular targeting of barley aspartic proteinase. PhD Thesis. Institute of Biotechnology and Department of Biosciences, Division of Genetics, University of Helsinki, Finland.
-
(1997)
Structure, Expression and Intracellular Targeting of Barley Aspartic Proteinase
-
-
Tormakangas, K.1
-
48
-
-
0028317608
-
Tissue-specific localization of aspartic proteinase in developing and germinating barley grains
-
Tormakangas, K., Kervinen, J., Ostman, A. and Teeri, T.H. (1994) Tissue-specific localization of aspartic proteinase in developing and germinating barley grains. Planta, 195, 116-125.
-
(1994)
Planta
, vol.195
, pp. 116-125
-
-
Tormakangas, K.1
Kervinen, J.2
Ostman, A.3
Teeri, T.H.4
-
49
-
-
0032958515
-
Saposins and their interaction with lipids
-
Vaccaro, A.M., Salvioli, R., Tatti, M. and Ciaffoni, F. (1999) Saposins and their interaction with lipids. Neurochem. Res., 24, 307-314.
-
(1999)
Neurochem. Res.
, vol.24
, pp. 307-314
-
-
Vaccaro, A.M.1
Salvioli, R.2
Tatti, M.3
Ciaffoni, F.4
-
50
-
-
0030060726
-
Purification, characterization and partial amino acid sequencing of two new aspartic proteinases from fresh flowers of Cynara cardunculus L
-
Verissimo, P., Faro, C., Moir, A.J., Lin, Y., Tang, J. and Pires, E. (1996) Purification, characterization and partial amino acid sequencing of two new aspartic proteinases from fresh flowers of Cynara cardunculus L. Eur. J. Biochem., 235, 762-768.
-
(1996)
Eur. J. Biochem.
, vol.235
, pp. 762-768
-
-
Verissimo, P.1
Faro, C.2
Moir, A.J.3
Lin, Y.4
Tang, J.5
Pires, E.6
-
51
-
-
0032514902
-
Lysosomal degradation on vesicular membrane surfaces
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Wilkening, G., Linke, T. and Sandhoff, K. (1998) Lysosomal degradation on vesicular membrane surfaces. J. Biol. Chem., 273, 30271-30278.
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(1998)
J. Biol. Chem.
, vol.273
, pp. 30271-30278
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Wilkening, G.1
Linke, T.2
Sandhoff, K.3
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