All 16 centromere DNAs from Saccharomyces cerevisiae show DNA curvature

Nucleic Acids Research

Volumn 27, Issue 6, 1999, Pages 1444-1449

  Bechert, Thorsten ^c   Heck, Susanne ^a   Fleig, Ursula ^a,b   Diekmann, Stephan ^c   Hegemann, Johannes H ^a,b  

^a JUSTUS LIEBIG UNIVERSITY   (Germany)

^b HEINRICH HEINE UNIVERSITY   (Germany)

^c FRITZ LIPMANN INSTITUTE   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CURVED DNA; FUNGAL DNA;

ARTICLE; CENTROMERE; COMPUTER ANALYSIS; DNA SEQUENCE; DNA STRUCTURE; MOLECULAR CLONING; MOLECULAR MODEL; NONHUMAN; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE;

BASE SEQUENCE; CENTROMERE; CLONING, MOLECULAR; COMPUTER SIMULATION; DNA, FUNGAL; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ETHIDIUM; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; SACCHAROMYCES CEREVISIAE; TEMPERATURE;

SACCHAROMYCES CEREVISIAE; SACCHAROMYCETALES;

EID: 0033559519     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/27.6.1444     Document Type: Article

References (64)

1. Pluta, A.F., Mackay, A.M., Ainsztein, A.M., Goldberg, I.G. and Earnshaw, W.C. (1995) Science, 270, 1591-1594.
2. Choo, K.H. (1997) The Centromere. Oxford University Press, Oxford, UK.
3. Cottarel, G., Shero, J.H., Hieter, P. and Hegemann, J.H. (1989) Mol. Cell. Biol., 9, 3342-3349.
4. Hyman, A.A. and Sorger, P.K. (1995) Annu. Rev. Cell Dev. Biol., 11, 471-495.
5. Lechner, J. and Ortiz, J. (1996) FEBS Lett., 389, 70-74.
6. Hegemann, J.H. and Fleig, U.N. (1993) Bioessays, 15, 451-460.
7. Fleig, U., Beinhauer, J.D. and Hegemann, J.H. (1995) Nucleic Acids Res., 23, 922-924.
8. Mellor, J., Jiang, W., Funk, M., Rathjen, J., Barnes, C.A., Hinz, T., Hegemann, J.H. and Philippsen, P. (1990) EMBO J., 9, 4017-4026.
9. Wilmen, A., Pick, H., Niedenthal, R.K., Sen-Gupta, M. and Hegemann, J.H. (1994) Nucleic Acids Res., 22, 2791-2800.
10. Niedenthal, R., Stoll, R. and Hegemann, J.H. (1991) Mol. Cell. Biol., 11, 3545-3553.
11. Diekmann, S. (1986) FEBS Lett., 195, 53-56.
12. Diekmann, S. and Zarling, D.A. (1987) Nucleic Acids Res., 15, 6063-6074.
13. Koo, H.S., Wu, H.M. and Crothers, D.M. (1986) Nature, 320, 501-506.
14. Ng, R., Ness, J. and Carbon, J. (1986) Basic Life Sci., 40, 479-492.
15. Murphy, M.R., Fowlkes, D.M. and Fitzgerald Hayes, M. (1991) Chromosoma, 101, 189-197.
16. Dujon, B. (1996) Trends Genet., 12, 263-270.
17. Huang, R.Y. and Kowalski, D. (1993) EMBO J., 12, 4521-4531.
18. Eckdahl, T.T. and Anderson, J.N. (1990) Nucleic Acids Res., 18, 1609-1612.
19. Parekh, B.S. and Hatfield, G.W. (1996) Proc. Natl Acad. Sci. USA, 93, 1173-1177.
20. Natesan, S. and Gilman, M.Z. (1993) Genes Dev., 7, 2497-2509.
21. Perez-Martin, J. and de Lorenzo, V. (1997) Annu. Rev. Microbiol., 51, 593-628.
22. Schatz, T. and Langowski, J. (1997) J. Biomol. Struct. Dyn., 15, 265-275.
23. van der Vliet, P.C. and Verrijzer, C.P. (1993) Bioessays, 15, 25-32.
24. Marini, J.C., Levene, S.D., Crothers, D.M. and Englund, P.T. (1983) Cold Spring Harbor Symp. Quant. Biol., 1, 279-283.
25. Peck, L.J. and Wang, J.C. (1981) Nature, 292, 375-378.
26. Rhodes, D. and Klug, A. (1981) Nature, 292, 378-380.
27. Crothers, D.M., Haran, T.E. and Nadeau, J.G. (1990) J. Biol. Chem., 265, 7093-7096.
28. Diekmann, S. and Travers, A.A. (1992) In Lilley, D.M.J., Heumann, H. and Suck, D. (eds), Structural Tools for the Analysis of Protein-Nucleic Acid Complexes. Birkhäuser Verlag, Basel, Switzerland, pp. 63-79.
29. Palecek, E. (1991) Crit. Rev. Biochem. Mol. Biol., 26, 151-226.
30. Trifonov, E.N. (1991) Trends Biochem. Sci., 16, 467-470.
31. Diekmann, S., von Kitzing, E., McLaughlin, L., Ott, J. and Eckstein, F. (1987) Proc. Natl Acad. Sci. USA, 84, 8257-8261.
32. Brukner, I., Susic, S., Dlakic, M., Savic, A. and Pongor, S. (1994) J. Mol. Biol., 236, 26-32.
33. Dlakic, M. and Harrington, R.E. (1995) J. Biol. Chem., 270, 29945-29952.
34. Diekmann, S. and Wang, J.C. (1985) J. Mol. Biol., 186, 1-11.
35. Zarling, D.A., Diekmann, S. and Calhoun, C.J. (1988) In Olson, W.K., Sarma, M.H., Sarma, R.H. and Sundaralingam, M. (eds), Structure and Expression. Adenine Press, Schenectady, NY, Vol. 3, pp. 87-96.
36. Diekmann, S. and McLaughlin, L.W. (1988) J. Mol. Biol., 202, 823-834.
37. Diekmann, S. (1987) Nucleic Acids Res., 15, 247-265.
38. Wu, H.M. (1982) PhD Thesis. Department of Chemistry, Yale University, New Haven, CT.
39. Diekmann, S. and Lilley, D.M. (1987) Nucleic Acids Res., 15, 5765-5774.
40. Stoler, S., Keith, K.C., Curnick, K.E. and Fitzgerald Hayes, M. (1995) Genes Dev., 9, 573-586.
41. Meluh, P.B. and Koshland, D. (1995) Mol. Biol. Cell, 6, 793-807.
42. Meluh, P.B. and Koshland, D. (1997) Genes Dev., 11, 3401-3412.
43. Bloom, K., Hill, A., Kenna, M. and Saunders, M. (1989) Trends Biochem. Sci., 14, 223-227.
44. Funk, M., Hegemann, J.H. and Philippsen, P. (1989) Mol. Gen. Genet., 219, 153-160.
45. Funk, M. (1990) PhD Thesis. Institut für Mikro- und Molekularbiologie, Justus-Liebig-Universität, Giessen, Germany, p. 127.
46. Wilmen, A. and Hegemann, J.H. (1996) Chromosoma, 104, 489-503.
47. Niedenthal, R.K., Sen-Gupta, M., Wilmen, A. and Hegemann, J.H. (1993) Nucleic Acids Res., 21, 4726-4733.
48. Diekmann, S. (1992) Methods Enzymol., 212, 30-46.
49. Bolshoy, A., McNamara, P., Harrington, R.E. and Trifonov, E.N. (1991) Proc. Natl Acad. Sci. USA, 88, 2312-2316.
50. Wu, H.M. and Crothers, D.M. (1984) Nature, 308, 509-513.
51. Bhattacharyya, A. and Lilley, D.M. (1989) Nucleic Acids Res., 17, 6821-6840.
52. Notation, C., Diekmann, S., Dickerson, R.E., Bansal, M., Calladine, C.R., Hunter, W.N., Kennard, O., von Kitzing, E., Lavery, R., Nelson, H.C.M., Olson, W.K., Saenger, W., Shakked, Z., Sklenar, H., Soumpasis, D.M., Tung, C.-S., Wang, A.H.-J. and Zhurkin, V.B. (1989) EMBO J., 8, 1-4.
53. Cumberledge, S. and Carbon, J. (1987) Genetics, 117, 203-212.
54. Travers, A.A. (1989) Annu. Rev. Biochem., 58, 427-452.
55. Gaudet, A. and Fitzgerald Hayes, M. (1987) Mol. Cell. Biol., 7, 68-75.
56. Sorger, P.K., Severin, F.F. and Hyman, A.A. (1994) J. Cell Biol., 127, 995-1008.
57. Ueki, N., Momoi, H., Yamada, H. and Mizuno, T. (1993) Gene, 132, 247-250.
58. Marschall, L.G. and Clarke, L. (1995) J. Cell Biol., 128, 445-454.
59. Willard, H.F. (1990) Trends Genet., 6, 410-416.
60. Grady, D.L., Ratliff, R.L., Robinson, D.L., McCanlies, E.C., Meyne, J. and Moyzis, R.K. (1992) Proc. Natl Acad. Sci. USA, 89, 1695-1699.
61. Catasti, P., Gupta, G., Garcia, A.E., Ratliff, R., Hong, L., Yau, P., Moyzis, R.K. and Bradbury, E.M. (1994) Biochemistry, 33, 3819-3830.
62. Ferrer, N., Azorin, F., Villasante, A., Gutierrez, C. and Abad, J.P. (1995) J. Mol. Biol., 245, 8-21.
63. Wustinger, K. and Spevak, W. (1993) Nucleic Acids Res., 21, 3321.
64. Vollrath, D., Davis, R.W., Connelly, C. and Hieter, P. (1988) Proc. Natl Acad. Sci. USA, 85, 6027-6031.