Interaction of the type I methyltransferase M.EcoR1241 with modified DNA substrates: Sequence discrimination and base flipping

Biochemical Journal

Volumn 336, Issue 3, 1998, Pages 719-725

  Mernagh, Darren R ^a   Taylor, Ian A ^a,b   Kneale, G Geoff ^a  

^a UNIVERSITY OF PORTSMOUTH   (United Kingdom)

^b NATIONAL INSTITUTE FOR MEDICAL RESEARCH   (United Kingdom)

Author keywords

Base analogues; DNA methylation; Gel retardation; Restriction modification

Indexed keywords

METHYLTRANSFERASE;

ARTICLE; BINDING AFFINITY; CROSS LINKING; DNA FOOTPRINTING; MOLECULAR RECOGNITION; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA INTERACTION;

EID: 0032535247     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/bj3360719     Document Type: Article

References (34)

1. Klimasauskas, S., Kumar, S., Roberts, R. J. and Cheng, X. (1994) Cell 76, 357-369
2. Lloyd, R. S. and Cheng, X. D. (1997) Biopolymers 44, 139-151
3. Wilson, G. G. and Murray, N. E. (1991) Annu. Rev. Genet. 25, 585-627
4. Bickle, T. A. and Kruger, D. H. (1993) Microbiol. Rev. 57, 434-450
5. Cowan, G. M., Gann, A. A. F. and Murray, N. E. (1989) Cell 56, 103-109
6. Gubler, M., Braguglia, D., Meyer, J., Piekarowicz, A. and Bickle, T. A. (1992) EMBO J. 11, 233-240
7. Fuller-Pace, F. V. and Murray, N. E. (1986) Proc. Natl. Acad. Sci. U.S.A. 83, 9366-9372
8. Kannan, P., Cowan, G. M., Daniel, A. S., Gann, A. A. F. and Murray, N. E. (1989) J. Mol. Biol. 209, 335-344
9. Tyndall, C., Meister, J. and Bickle, T. A. (1994) J. Mol. Biol. 237, 266-274
10. Taylor, I., Patel, J., Firman, K. and Kneale, G. (1992) Nucleic Acids Res. 20, 179-186
11. Powell, L. M., Dryden, D. T. F., Willcock, D. F., Pain, R. H. and Murray, N. E. (1993) J. Mol. Biol. 234, 60-71
12. Cooper, L. P. and Dryden, D. T. F. (1994) J. Mol. Biol. 236, 1011-1021
13. Meister, J., MacWilliams, M., Hubner, P., Jutte, H., Skrzypek, E., Piekarowicz, A. and Bickle, T. A. (1993) EMBO J. 12, 4585-4591
14. Abadjieva, A., Patel, J., Webb, M., Zinkevich, V. and Firman, K. (1993) Nucleic Acids Res. 21, 4435-4443
15. Kneale, G. G. (1994) J. Mol. Biol. 243, 1-5
16. Taylor, I., Watts, D. and Kneale, G. (1993) Nucleic Acids Res. 21, 4929-4935
17. Powell, L. M. and Murray, N. E. (1995) Nucleic Acids Res. 23, 967-974
18. Dryden, D. T. F., Cooper, L. P. and Murray, N. E. (1993) J. Biol. Chem. 268, 13228-13236
19. Webb, M., Taylor, I. A., Firman, K. and Kneale, G. G. (1995) J. Mol. Biol. 250, 181-190
20. Glover, S. W. (1970) Genet. Res. 15, 237-250
21. Kusiak, M., Price, C., Rice, D. and Hornby, D. P. (1992) Mol. Microbiol. 6, 3251-3256
22. Mernagh, D. R., Reynolds, L. A. and Kneale, G. G. (1997) Nucleic Acids Res. 25, 987-991
23. Taylor, I. A., Webb, M. and Kneale, G. G. (1996) J. Mol. Biol. 258, 62-73
24. Taylor, I. A., Davis, K. G., Watts, D. and Kneale, G. G. (1994) EMBO J. 13, 5772-5778
25. Mernagh, D. R. and Kneale, G. G. (1996) Nucleic Acids Res. 24, 4853-4858
26. Patel, J., Taylor, I., Dutta, C. F., Kneale, G. and Firman, K. (1992) Gene 112, 21-27
27. Devchand, P. R., McGhee, J. D. and van de Sande, J. (1993) Nucleic Acids Res. 21, 3437-3443
28. Maniatis, T., Fritsch, E. F. and Sambrook, J. (1982) Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
29. Shaw, P. E. and Stewart, A. F. (1995) in Methods in Molecular Biology, vol. 30 (Kneale, G. G., ed.), pp. 79-87, Humana Press, Totowa, NJ
30. Klimasauskas, S. and Roberts, R. J. (1995) Nucleic Acids Res. 23, 1388-1395
31. Nikiforov, T. T. and Connolly, B. A. (1992) Nucleic Acids Res. 20, 1209-1214
32. Chen, A., Powell, L. M., Dryden, D. T. F., Murray, N. E. and Brown, T. (1995) Nucleic Acids Res. 23, 1177-1183
33. Reinisch, K. M., Chen, L., Verdine, G. L. and Lipscomb, W. N. (1995) Cell 82, 143-153
34. Cal, S. and Connolly, B. A. (1997) J. Biol. Chem. 272, 490-496