The membrane affinities of the aliphatic amino acid side chains in an α-helical context are independent of membrane immersion depth

Biochemistry

Volumn 38, Issue 1, 1999, Pages 337-346

  Russell, Charles J ^a,b   Thorgeirsson, Thorgeir Elís ^a,c   Shin, Yeon Kyun ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b NORTHWESTERN UNIVERSITY   (United States)

^c DECODE GENETICS   (Iceland)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BILAYER MEMBRANE; CIRCULAR DICHROISM; ELECTRON SPIN RESONANCE; HYDROPHOBICITY; PARTITION COEFFICIENT; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE;

AMINO ACID SEQUENCE; AMINO ACIDS; CIRCULAR DICHROISM; ELECTRON SPIN RESONANCE SPECTROSCOPY; LIPID BILAYERS; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; OCTANOLS; PEPTIDE FRAGMENTS; PHOSPHATIDYLCHOLINES; PHOSPHATIDYLGLYCEROLS; PROTEIN BINDING; PROTEIN STRUCTURE, SECONDARY; THERMODYNAMICS; WATER;

EID: 0033524405     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi981179h     Document Type: Article

References (56)

1. Richards, F. M. (1977) Annu. Rev. Biophys. Bioeng. 6, 151-176.
2. Engelman, D. M. (1996) Science 274, 1850-1851.
3. Engelman, D. M., and Steitz, T. A. (1981) Cell 23, 411-422.
4. von Heijne, G. (1995) Bioessays 17, 25-30.
5. Bark, I. C., and Wilson, M. C. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 4621-4624.
6. Rothman, J. E. (1996) Protein Sci. 5, 185-194.
7. Hernandez, L. D., Hoffman, L. R., Wolfsberg, T. G., and White, J. E. (1996) Ann. Rev. Cell Dev. Biol. 12, 627-661.
8. Hughson, F. M. (1997) Curr. Biol. 7, R565-R569.
9. Stegmann, T. (1994) Curr. Biol. 4, 551-554.
10. Myles, D. G., and Primakoff, P. (1997) Biol. Reprod. 56, 320-327.
11. Wassarman, P. M. (1995) Curr. Opin. Cell Biol. 7, 658-664.
12. Ganz, T., and Lehrer, R. I. (1994) Curr. Opin. Immunol. 6, 584-589.
13. Jack, R. W., Tagg, J. R., and Ray, B. (1995) Microbiol. Rev. 59, 171-200.
14. Nicolas, P., Mor, A. (1995) Annu. Rev. Microbiol. 49, 277-304.
15. Lesieur, C., et al. (1997) Mol. Membr. Biol. 14, 45-64.
16. Martoglio, B., Hofmann, M. W., Brunner, J., and Dobberstein, B. (1995) Cell 81, 207-214.
17. Randall, L. L., Hardy, S. J., and Thom, J. R. (1987) Annu. Rev. Microbiol. 41, 507-541.
18. Pfanner, N., and Neupert, W. (1990) Annu. Rev. Biochem. 59, 331-353.
19. von Heijne, G. (1988) Biochim. Biophys. Acta 947, 307-333.
20. Tanford, C. (1980) The Hydrophobic Effect: Formation of Micelles and Biological Membranes, 2nd ed., John Wiley & Sons, New York.
21. Nakai, K., Kidera, A., and Kanehisa, M. (1988) Protein Eng. 2, 93-100.
22. Marqusee, J. A., and Dill, K. A. (1986) J. Chem. Phys. 85, 434-444.
23. Seelig, A., and Seelig, J. (1977) Biochemistry 16, 45-50.
24. Wiener, M. C., and White, S. H. (1992) Biophys. J. 61, 437-447.
25. Flewelling, R. F., and Hubbell, W. L. (1986) Biophys. J. 49, 541-552.
26. Ben-Tal, N., Ben, S. A., Nicholls, A., and Honig, B. (1996) Biophys. J. 70, 1803-1812.
27. Jacobs, R. E., and White, S. H. (1989) Biochemistry 28, 3421-3437.
28. Jähnig, F. (1983) Proc. Natl. Acad. Sci. U.S.A. 80, 3691-3695.
29. Russell, C. J., Thorgeirsson, T. E., and Shin, Y. K. (1996) Biochemistry 35, 9526-9532.
30. Jain, M. K., Rogers, J., Simpson, L., and Gierasch, L. M. (1985) Biochim. Biophys. Acta 816, 153-162.
31. Thorgeirsson, T. E., Russell, C. J., King, D. S., and Shin, Y.-K. (1996) Biochemistry 35, 1803-1809.
32. Wimley, W. C., and White, S. H. (1996) Nat. Struct. Biol. 3, 842-848.
33. Russell, C. J., King, D. S., Thorgeirrson, T. E., and Shin, Y.-K. (1998) Protein Eng. 11, 539-547.
34. Eisenberg, D., and McLachlan, A. D. (1991) Biochim. Biophys. Acta 1061, 297-303.
35. Fauchere, J.-L., and Pliska, V. (1983) Eur. J. Med. Chem.-Chim. Ther. 18, 369-375.
36. King, D. S., Fields, C. G., and Fields, G. B. (1990) Int. J. Pept. Protein Res. 36, 255-266.
37. Edelhoch, H. (1967) Biochemistry 6, 1948-1954.
38. Chakrabartty, A., Kortemme, T., Padmanabhan, S., and Baldwin, R. L. (1993) Biochemistry 32, 5560-5565.
39. Altenbach, C., Greenhalgh, D. A., Khorana, H. G., and Hubbell, W. L. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 1667-1671.
40. Kauzmann, W. (1959) Adv. Protein Chem. 14, 1-57.
41. Thorgeirsson, T. E., Yu, Y. G., and Shin, Y. K. (1995) Biochemistry 34, 5518-5522.
42. Baldwin, R. L. (1995) Biophys. Chem. 55, 127-135.
43. Muñoz, V., and Serrano, L. (1995) J. Mol. Biol. 245, 275-296.
44. O'Neil, K. T., and DeGrado, W. F. (1990) Science 250, 646-651.
45. Segrest, J. P., Jackson, R. L., Morrisett, J. D., and Gotto, A. J. (1974) FEBS Lett. 38, 247-258.
46. Anantharamaiah, G. M., et al. (1988) J. Lipid Res. 29, 309-318.
47. Fukushima, D., Yokoyama, S., Kroon, D. J., Kezdy, F. J., and Kaiser, E. T. (1980) J. Biol. Chem. 255, 10651-10657.
48. Kanellis, P., et al. (1980) J. Biol. Chem. 255, 11464-11472.
49. Rabenstein, M., and Shin, Y. K. (1995) Biochemistry 34, 13390-13397.
50. Chan, D. C., Fass, D., Berger, J. M., and Kim, P. S. (1997) Cell 89, 263-273.
51. Weissenhorn, W., Dessen, A., Harrison, S. C., Skehel, J. J., and Wiley, D. C. (1997) Nature 387, 426-430.
52. Rabenstein, M. D. (1996) Ph.D. Thesis, University of California, Berkeley.
53. Richards, F. M., and Richmond, T. (1977) Ciba Found. Symp. 1977, 23-45.
54. Wimley, W. C., Creamer, T. P., and White, S. H. (1996) Biochemistry 35, 5109-5124.
55. White, S. H., and Wimley, W. C. (1994) Curr. Opin. Struct. Biol. 4, 79-86.
56. Eisenberg, D. M., McLachlan, A. (1986) Nature 319, 199-203.