Site-directed mutagenesis of the AcMNPV p 143 gene: Effects on baculovirus DNA replication

Virology

Volumn 253, Issue 1, 1999, Pages 125-136

  Liu, Ge ^a,b   Carstens, Eric B ^a  

^a QUEEN S UNIVERSITY   (Canada)

^b NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

HELICASE; VIRUS DNA;

AMINO ACID SUBSTITUTION; ANIMAL CELL; ARTICLE; AUTOGRAPHA CALIFORNICA; BACULOVIRUS; DNA BINDING; DNA REPLICATION; DNA SYNTHESIS; GENE DELETION; GENE MUTATION; NONHUMAN; POLYHEDROSIS VIRUS; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN LOCALIZATION; SITE DIRECTED MUTAGENESIS; VIRUS GENE; VIRUS MUTANT;

EID: 0033524342     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1998.9485     Document Type: Article

References (52)

1. Ahrens, C. H., Leisy, D. J., and Rohrmann, G. F. (1996). "DNA Replication in Eukaryotic Cells" (M. L. DePamphilis, Ed.), pp. 855-872. Gold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
2. Ahrens, C. H., and Rohrmann, G. F. (1996). The DNA polymerase and helicase genes of a baculovirus of Orgyia pseudotsugata. J. Gen. Virol. 77, 825-837.
3. Brown, M., Crawford, A. M., and Faulkner, P. (1979). Genetic analysis of a baculovirus Autographs californica nuclear polyhedrosis virus. I. Isolation of temperature-sensitive mutants and assortment into complementation groups. J. Virol. 31, 190-198.
4. Carstens, E. B., Lu, A. L., and Chan, H. B. (1993). Sequence, transcriptional mapping, and overexpression of p47, a baculovirus gene regulating late gene expression. J. Virol. 67, 2513-2520.
5. 1-76. J. Virol. 68, 7728-7737.
6. Croizier, G., Croizier, L., Argaud, O., and Poudevigne, D. (1994). Extension of Autographs californica nuclear polyhedrosis virus host range by interspecific replacement of a short DNA sequence in the p143 helicase gene. Proc. Natl. Acad. Sci. USA 91, 48-52.
7. Deng, W. P., and Nickoloff, J. A. (1992). Site-directed mutagenesis of virtually any plasmid by eliminating a unique site. Anal. Biochem. 200, 81-88.
8. Erlandson, M. A., Skepasts, P., Kuzio, J., and Carstens, E. B. (1984). Genomic variants of a temperature-sensitive mutant of Autographs californica nuclear polyhedrosis virus containing specific reiterations of viral DNA. Virus Res. 1, 565-584.
9. Erlandson, M. A., Gordon, J., and Carstens, E. B. (1985). Size and map locations of early transcription products on the Autographa californica nuclear polyhedrosis virus genome. Virology 142, 12-23.
10. Feinberg, A. P., and Vogelstein, B. (1983). A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132, 6-13.
11. 1-ATPase, and other nucleotide-binding proteins. Proc. Natl. Acad. Sci. USA 83, 907-911.
12. George, J. W., Brosh, R. M., Jr., and Matson, S. W. (1994). A dominant negative allele of the Escherichia coll uvrD gene encoding DNA helicase II. A biochemical and genetic characterization. J. Mol. Biol. 235, 424-435.
13. Gorbalenya, A. E., Koonin, E. V., Donchenko, A. P., and Blinov, V. M. (1989). Two related superfamilies of putative helicases involved in replication, recombination, repair and expression of DNA and RNA genomes. Nucleic Acids Res. 17, 4713-4730.
14. Gorbalenya, A. F., and Koonin, E. V. (1993). Helicases: amino acid sequence comparisons and structure-function relationships. Curr. Opin. Struct. Biol. 3, 419-429.
15. Gordon, J. D., and Carstens, E. B. (1984). Phenotypic characterization and physical mapping of a temperature-sensitive mutant of Autographa californica nuclear polyhedrosis virus defective in DNA synthesis. Virology 138, 69-81.
16. Graves-Woodward, K. L., Gottlieb, J., Challberg, M. D., and Weller, S. K. (1997). Biochemical analyses of mutations in the HSV-1 helicase-primase that alter ATP hydrolysis, DNA unwinding, and coupling between hydrolysis and unwinding. J. Biol. Chem. 272, 4623-4630.
17. Heldens, J. G. M., Liu, Y., Zuidema, D., Goldbach, R. W., and Vlak, J. M. (1997). Characterization of a putative Spodoptera exigua multicapsid nucleopolyhedrovirus helicase gene. J. Gen. Virol. 78, 3101-3114.
18. Hodgman, T. C. (1988). A new superfamily of replicative proteins. Nature (London) 333, 22-23.
19. Jarvis, D. L., Fleming, J-A. G. W., Kovacs, G. R., Summers, M. D., and Guarino, L. A. (1990). Use of early baculovirus promoters for continuous expression and efficient processing of foreign gene products in stably transformed lepidopteran cells. Bio/Technol. 8, 950-955.
20. Jarvis, D. L., Weinkauf, C., and Guarino, L. A. (1996). Immediate-early baculovirus vectors for foreign gene expression in transformed or infected insect cells. Protein Expression Purification 8, 191-203.
21. Jindal, H. K., Yong, C. B., Wilson, G. M., Tam, P., and Astell, C. R. (1994). Mutations in the NTP-binding motif of minute virus of mice (MVM) NS-1 protein uncouple ATPase and DNA helicase functions. J. Biol. Chem. 269, 3283-3289.
22. Jurnak, F. (1985). Structure of the GDP domain of EF-Tu and location of the amino acids homologous to ras oncogene proteins. Science 230, 32-36.
23. Kamita, S. G., and Maeda, S. (1996). Abortive infection of the baculovirus Autographa californica nuclear polyhedrosis virus in Sf-9 cells after mutation of the putative DNA helicase gene. J. Virol. 70, 6244-6250.
24. Kamita, S. G., and Maeda, S. (1997). Sequencing of the putative DNA helicase-encoding gene of the Bombyx mon nuclear polyhedrosis virus and fine-mapping of a region involved in host range expansion. Gene 190, 173-179.
25. Koetsier, P. A., Schorr, J., and Doerfler, W. (1993). A rapid optimized protocol for downward alkaline Southern blotting of DNA. Bio/Techniques 15, 260-262.
26. Kool, M., Ahrens, C. H., Goldbach, R. W., Rohrmann, G. F., and Vlak, J. M. (1994). Identification of genes involved in DNA replication of the Autographs californica baculovirus. Proc. Natl. Acad. Sci. USA 91, 11212-11216.
27. Korolev, S., Hsieh, J., Gauss, G. H., Lohman, T. M., and Waksman, G. (1997). Major domain swiveling revealed by the crystal structures of complexes of E-coli Rep helicase bound to single-stranded DNA and ADP. Cell 90, 635-647.
28. Laufs, S., Lu, A., Arrell, L. K., and Carstens, E. B. (1997). Autographa californica nuclear polyhedrosis virus p143 gene product is a DNA-binding protein. Virology 228, 98-106.
29. Liu, Q., and Summers, W. C. (1988). Site-directed mutagenesis of a nucleotide-binding domain in HSV-1 thymidine kinase: Effects on catalytic activity. Virology 163, 638-642.
30. Lu, A. (1993). "Nucleotide Sequence, Transcriptional Mapping, Regulation, and Overexpression of an Essential Early Baculovirus Gene." Ph.D. thesis, Queen's University, Kingston, Ontario.
31. Lu, A., and Carstens, E. B. (1991). Nucleotide sequence of a gene essential for viral DNA replication in the baculovirus Autographa californica nuclear polyhedrosis virus. Virology 181, 336-347.
32. Lu, A., and Carstens, E. B. (1992). Transcription analysis of the EcoRI D region of the baculovirus Autographa californica nuclear polyhedrosis virus identifies an early 4-kilobase RNA encoding the essential p143 gene. J. Virol. 66, 655-663.
33. Lu, A., and Miller, L. K. (1995). The roles of eighteen baculovirus late expression factor genes in transcription and DNA replication. J. Virol. 69, 975-982.
34. Maeda, S., Kamita, S. G., and Kondo, A. (1993). Host range expansion of Autographa californica nuclear polyhedrosis virus (NPV) following recombination of a 0.6-kilobase-pair DNA fragment originating from Bombyx mon NPV. J. Virol. 67, 6234-6238.
35. Martinez, R., Shao, L., and Weller, S. K. (1992). The conserved helicase motifs of the herpes simplex virus type 1 origin-binding protein UL9 are important for function. J. Virol. 66, 6735-6746.
36. Naumovski, L., and Friedberg, E. C. (1986). Analysis of the essential and excision repair functions of the RAD3 gene of Saccheromyces cerevisiae by mutagenesis. Mol. Cell. Biol. 6, 1218-1227.
37. Pai, E. F., Krengel, U., Petsko, G. A., Goody, R. S., Kabsch, W., and Wittinghofer, A. (1990). Refined crystal structure of the triphosphate conformation of H-ras p21 at 1.25 Å resolution: Implications for the mechanism of GTP hydrolysis. EMBO J. 9, 2351-2359.
38. Pakula, A. A., and Sauer, R. T. (1989). Genetic analysis of protein stability and function. Annu. Rev. Genet 23, 289-310.
39. Partington, S., Yu, H., Lu, A., and Carstens, E. B. (1990). Isolation of temperature sensitive mutants of Autographa californica nuclear polyhedrosis virus: Phenotype characterization of mutants defective in very late gene expression. Virology 175, 91-102.
40. Passarelli, A. L., and Miller, L. K. (1993). Identification of genes encoding late expression factors located between 56.0 and 65.4 map units of the Autographa californica nuclear polyhedrosis virus genome. Virology 197, 704-714.
41. Pearson, M., Bjornson, R., Pearson, G., and Rohrmann, G. (1992). The Autographa californica baculovirus genome: Evidence for multiple replication origins. Science 257, 1382-1384.
42. Schlichting, I., Almo, S. C., Rapp, G., Wilson, K., Petratos, K., Lentfer, A., Wittinghofer, A., Kabsch, W., Pai, E. F., Petsko, G. A., and Goody, R. S. (1990). Time-resolved x-ray crystal log raphic study of the conformational change in Ha-Ras p21 protein on GTP hydrolysis. Nature (London) 345, 309-315.
43. Shrimankar, P., Stordal, L., and Maurer, R. (1992). Purification and characterization of a mutant DnaB protein specifically defective in ATP hydrolysis. J. Bacteriol. 174, 7689-7696.
44. Story, R. M., and Steitz, T. A. (1992). Structure of the recA protein-ADP complex. Nature 355, 374-376.
45. Subramanya, H. S., Bird, L. E., Brannigan, J. A., and Wigley, D. B. (1996). Crystal structure of a DExx box DNA helicase. Nature 384, 379-383.
46. Sung, P., Higgins, D., Prakash, L., and Prakash, S. (1988). Mutation of lysine-48 to arginine in the yeast RAD3 protein abolishes its ATPase and DNA helicase activities but not the ability to bind ATP. EMBO J. 7, 3263-3269.
47. Vaughn, J. L., Goodwin, R. H., Tompkin, G. L., and McCawley, P. (1977). The establishment of two insect cell lines from the insect Spodoptera frugiperda (Lepidoptera:Noctuidae). In Vitro 13, 213-217.
48. Walker, J. E., Saraste, M., Runswick, M. J., and Gay, N. J. (1982). Distantly related sequences in the alpha and beta subunits of ATP synthase, myosin, kinases, and other ATP-requiring enzymes and a common nucleotide binding fold. EMBO J. 1, 945-951.
49. Weiner, B. M., and Bradley, M. K. (1991). Specific mutation of a regulatory site within the ATP-binding region of simian virus 40 large T antigen. J. Virol. 65, 4973-4984.
50. Wu, Y., and Carstens, E. B. (1996). Initiation of baculovirus DNA replication: Early promoter regions can function as infection-dependent replicating sequences in a plasmid-based replication assay. J. Virol. 70, 6967-6972.
51. Wu, Y., and Carstens, E. B. (1998). A baculovirus single-stranded DNA binding protein, LEF-3, mediates the nuclear localization of the putative helicase P143. Virology 247, 32-40.
52. Zhu, L., and Weller, S. K. (1992). The six conserved helicase motifs of the UL5 gene product, a component of the herpes simplex virus type 1 helicase-primase, are essential for its function. J. Virol. 66, 469-479.