The DNA polymerase and helicase genes of a baculovirus of Orgyia pseudotsugata

Journal of General Virology

Volumn 77, Issue 5, 1996, Pages 825-837

  Ahrens, Christian H ^a   Rohrmann, George F ^a  

^a OREGON STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE; HELICASE; VIRUS DNA; VIRUS PROTEIN;

AMINO ACID SEQUENCE; ANIMAL CELL; ARTICLE; AUTOGRAPHA CALIFORNICA; BACULOVIRUS; CONTROLLED STUDY; DNA TRANSFECTION; GENE SEQUENCE; INSECT; LEPIDOPTERA; NONHUMAN; PLASMID; POLYHEDROSIS VIRUS; PRIORITY JOURNAL; REPORTER GENE; SEQUENCE HOMOLOGY; VIRUS GENE; VIRUS REPLICATION;

EID: 0029986078     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/0022-1317-77-5-825     Document Type: Article

References (50)

1. AHRENS, C. H. & ROHRMANN, G. F. (1995 a). Identification of essential trans-acting regions required for DNA replication of the Orgyia pseudotsugata multinucleocapsid nuclear polyhedrosis virus. lef-1 is an essential replication gene. Virology 207, 417-428.
2. AHRENS, C. H & ROHRMANN, G. F. (1995 b) Replication of Orgyia pseudotsugata baculovirus DNA: ie-1 and lef-2 are essential and ie-2. p34 and Op-iap are stimulatory genes. Virology 212, 650-662
3. AHRENS, C. H., CARLSON, C. & ROHRMANN, G F. (1995 a). Identification, sequence and transcriptional analysis of lef-3, a gene essential for Orgvia pseudotsugata baculovirus DNA replication. Virology 210, 372-382.
4. AHRENS. C. H., PEARSON. M. N. & ROHRMANN. G. F. (1995 a). Identification and characterization of a second putative origin of DNA replication in a baculovirus of Orgvia pseudotsugata. Virology 207, 572-576
5. ARGOS, P. (1988). A sequence motif in many polymerases. Nucleic Acids Research 16, 9909-9916.
6. AYRES, M. D., HOWARD, S. C., KUZIO, J., LOPEZ-FERBER, M & POSSEE, R. D. (1994). The complete DNA sequence of Autographa californica nuclear polyhedrosis virus. Virology 202, 586-605.
7. BIRNBAUM, M. J., CLEM, R. J. & MILLER, L. K. (1994). An apoptosis-inhibiting gene from a nuclear polyhedrosis virus encoding a polypeptide with Cys/His sequence motifs. Journal of Virology 68, 2521-2528.
8. BJORNSON, R. M., GLOCKER, B. & ROHRMANN, G. F. (1992). Characterization of the nucleotide sequence of the Lymantria dispar nuclear polyhedrosis virus DNA polymerase gene region. Journal of General Virology 73, 3177-3183.
9. BLISSARD, G. W. & ROHRMANN, G. F. (1990). Baculovirus diversity and molecular biology. Annual Review of Entomology 35, 127-155.
10. CHAEYCHOMSRI, S., IKEDA, M. & KOBAYASHI, M. (1995). Nucleotide sequence and transcriptional analysis of the DNA polymerase gene of Bombyx mori nuclear polyhedrosis virus. Virology 206, 435-447
11. CLEM, R. J., FECHHEIMER, M. & MILLER, L. K. (1991). Prevention of apoptosis by a baculovirus gene during infection of insect cells Science 254, 1388-1390.
12. COWAN, P., BULACH, D., GOODGE, K., ROBERTSON, A. & TRIBE, D. E. (1994). Nucleotide sequence of the polyhedrin gene region of Helicoverpa zea single nucleocapsid nuclear polyhedrosis virus: placement of the virus in lepidopteran nuclear polyhedrosis virus group II. Journal of General Virology 75, 3211-3218.
13. CROIZIER, G., CROIZIER, L., ARGAUD, O. & POUDEVIGNE, D. (1994). Extension of Autographa californica nuclear polyhedrosis virus host range by interspecific replacement of a short DNA sequence in the p143 helicase gene. Proceedings of the National Academy of Sciences, USA 91, 48-52.
14. DEVEREUX, J., HAEBERLI, P. & SMITHIES, O. (1984). A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Research 12, 387-395.
15. FELSENSTEIN, J. (1989). PHYLIP - phylogeny inference package (version 3 2). Cladistics 5, 164-166.
16. GOMBART, A. F., BLISSARD, G. W. & ROHRMANN, G. F. (1989). Characterization of the genetic organization of the HindIII-M region of the multicapsid nuclear polyhedrosis virus of Orgyia pseudotsugata reveals major differences among baculoviruses. Journal of General Virology 70, 1815-1828.
17. GORBALENYA, A. E., KOONIN, E. V., DONCHENKO, A. P. & BLINOV, V. M. (1989 a). One more conserved sequence motif in helicases. Nucleic Acids Research 16, 7734.
18. GORBALENYA, A. E., KOONIN, E. V., DONCHENKO, A. P. & BLINOV, V. M. (1989 b). Two related superfamilies of putative helicases involved in replication, recombination, repair and expression of DNA and RNA genomes. Nucleic Acids Research 17, 4713-4730.
19. GROSS, C. H., WOLGAMOT, G. M., RUSSELL, R. L. Q., PEARSON, M. N. & ROHRMANN, G. F. (1993) A 37 kDa glycoprotein from a baculovirus of Orgyia pseudotsugata is localized to cytoplasmic inclusion bodies. Journal of Virology 61, 469-475.
20. HENIKOFF, S. (1987). Unidirectional digestion with exonuclease III in DNA sequence analysis. Methods in Enzymology 155, 156-165.
21. HENIKOFF, S. & HENIKOFF, J. G. (1991). Automated assembly of protein blocks for database searching. Nucleic Acids Research 19, 6565-6572
22. HODGMAN, T. C. (1988). A new superfamily of replicative proteins. Nature 333, 22-23. (Author's correction: Nature 333, 578.)
23. HWANG, C. B. C., RUFFNER, K. L. & COEN, D. M. (1992). A point mutation within a distinct conserved region of the herpes simplex virus DNA polymerase gene confers drug resistance. Journal of Virology 66, 1774-1776.
24. JEHLE, J. A. & BACKHAUS, H. (1994). Genome organization of the DNA-binding protein gene region of Cryptophlebia leucotreta granulosis virus is closely related to that of nuclear polyhedrosis viruses Journal of General Virology 75, 1815-1820.
25. KIMURA, M. (1983). The Neutral Theory of Molecular Evolution Cambridge: Cambridge University Press.
26. KOOL, M., VOETEN, J. T. M., GOLDBACH, R. W. TRAMPER, J. & VLAK, J. M. (1993) Identification of seven putative origins of Autographa californica MNPV DNA replication Journal of General Virology 74, 2661-2668.
27. KOOL, M , AHRENS, C , GOLDBACH, R. W., ROHRMANN, G. F. & VLAK, J. M. (1994). Identification of genes involved in DNA replication of the Autographa californica baculovirus. Proceedings of the National Academy of Sciences, USA 91, 11212-11236.
28. LEISY, D. J. & ROHRMANN, G. F. (1993). Characterization of the replication of plasmids containing hr sequences in baculovirus-infected Spodoptera frugiperda cells. Virology 196, 722-730.
29. LEISY, D. J., ROHRMANN, G F. & BEAUDREAU, G. S. (1984). Conservation of genome organization in two multicapsid nuclear polyhedrosis viruses. Journal of Virology 52, 699-702.
30. LINDER, P., LASKO, P. F., ASHBURNER, M., LEROY, P., NIELSEN, P. J., NISHI, K., SCHNIER, J. & SLONIMSKI, P. P. (1989). Birth of the D-E-A-D box. Nature 337, 121-122.
31. LIPMAN, D. J., ALTSCHUL, F. A. & KECECIOGLU, J D. (1989). A tool for multiple sequence alignment. Proceedings of the National Academy of Sciences, USA 86, 4412-4415.
32. LIU, J.J. & CARSTENS, E. B. (1995). Identification, localization, transcription, and sequence analysis of the Choristoneura fumiferana nuclear polyhedrosis virus DNA polymerase gene. Virology 209, 538-549.
33. LU, A. & CARSTENS, E. B. (1991). Nucleotide sequence of a gene essential for viral DNA replication in the baculovirus Autographa californica nuclear polyhedrosis virus. Virology 181, 336-347.
34. LU, A. & MILLER, L. K. (1995). The roles of eighteen baculovirus late expression factor genes in transcription and DMA replication. Journal of Virology 69, 975-982.
35. MAEDA, S., KAMITA, S. G. & KONDO, A. (1993). Host range expansion of Autographa californica nuclear polyhedrosis virus (NPV) following recombination of a 0-6-kilobase-pair DNA fragment originating from Bombyx mori NPV. Journal of Virology 67, 6234-6238.
36. MATSON, S. & KAISER-ROGERS, A. (1990). DNA helicases. Annual Review of Biochemistry 59, 289-329.
37. MORRISON, A., BELL, J. B., KUNKEL, T. A. & SUGINO, A. (1991). Eukaryotic DNA polymerase amino acid sequence required for 3′ → 5′ exonuclease activity. Proceedings of the National Academy of Sciences, USA 88, 9473-9477.
38. OHRESSER, M., MORIN, N., CERUTTI, M. & DELSERT, C. (1994). Temporal regulation of a complex and unconventional promoter by viral products. Journal of Virology 68, 2589-2597.
39. OLSEN, S (1990). Phylogeny reconstruction. In Molecular Systematics, Chapter 11. Edited by D. M. Hillis & C. Moritz. Sunderland, Mass.: Sinauer Associates.
40. PEARSON, M N. & ROHRMANN, G. F. (1995). Lymantria dispar nuclear polyhedrosis virus homologous regions: characterization of their ability to function as replication origins. Journal of Virology 69, 213 221.
41. PEARSON, M. N., BJORNSON, R. M., PEARSON, G. D. & ROHRMANN, G. F. (1992). The Autographa californica baculovirus genome: evidence for multiple replication origins. Science 257, 1382-1384.
42. PEARSON, M. N., BJORNSON, R M., AHRENS, C. & ROHRMANN, G. F. (1993). Identification and characterization of a putative origin of DNA replication in the genome of a baculovirus pathogenic for Orgyia pseudotsugata. Virology 197, 715-725.
43. RUSSELL, R. L. Q. & ROHRMANN, G F. (1993). A 25 kilodalton protein is associated with the envelopes of occluded baculovirus virions. Virology 195, 532-540.
44. SARASTE, M , SIBBALD, P. R. & WITTTNGHOFER, A. (1990). The P-loop - a common motif in ATP- and GTP-binding proteins. Trends in Biological Sciences 15, 430-434.
45. SUMMERS. M. D. & SMITH, G. E. (1987). A Manual of Methods for Baculovirus Vectors and Insect Cell Culture Procedures. Texas Agricultural Experiment Station Bulletin no. 1555.
46. THEILMANN, D. A. & STEWART, S. (1991). Identification and characterization of the IE-1 gene of Orgyia pseudotsugata multicapsid nuclear polyhedrosis virus. Virology 180, 492-508.
47. TOMALSKI, M. D., WU, J. & MILLER, L. K. (1988). The location, sequence, transcription, and regulation of a baculovirus DNA polymerase gene. Virology 167, 591-600.
48. WALKER, J. E , SARASTE, M., RUSHWICK, M. J. & GAY, N. J. (1982). Distantly related sequences in the a- and b-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold. EMBO Journal 1, 945-951.
49. WANG, T S.-F. (1991). Eukaryotic DNA polymerases. Annual Review of Biochemistry 60, 513-552.
50. ZHU, L. & WELLER, S. K. (1992). The six conserved helicase motifs of the UL5 gene product, a component of the herpes simplex virus type 1 helicase-primase, are essential for its function. Journal of Virology 66, 469-479.