Perturbing the DNA sequence selectivity of metallointercalator-peptide conjugates by single amino acid modification

Biochemistry

Volumn 38, Issue 31, 1999, Pages 10042-10051

  Hastings, Curtis A ^a   Barton, Jacqueline K ^a  

^a California Institute of Technology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; ARGININE; DNA; DNA BINDING PROTEIN; GLUTAMIC ACID; INTERCALATING AGENT; METAL; NUCLEIC ACID; PEPTIDE; PHENANTHROLINE DERIVATIVE; QUINONE DERIVATIVE; RHODIUM;

ARTICLE; CATTLE; CHEMICAL STRUCTURE; CONJUGATE; CONTROLLED STUDY; DISSOCIATION CONSTANT; DNA BINDING; DNA SEQUENCE; NONHUMAN; PRIORITY JOURNAL; PROTEIN STRUCTURE; THERMODYNAMICS;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; BINDING SITES; CIRCULAR DICHROISM; DEOXYRIBONUCLEASE ECORI; DNA; ETHYLENEDIAMINES; GLUTAMIC ACID; INTERCALATING AGENTS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDES; ORGANOMETALLIC COMPOUNDS; PEPTIDES; PHOTOLYSIS; THERMODYNAMICS;

BOS TAURUS;

EID: 0033520082     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi982039a     Document Type: Article

References (34)

1. Pabo, C. O., and Sauer, R. T. (1992) Annu. Rev. Biochem. 61, 1053.
2. Rhodes, D., Schwabe, J. W. R., Chapman, L., and Fairall, L (1996) Philos. Trans. R. Soc. London B 351, 501.
3. Desjarlais, J. R., and Berg, J. M. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 7345.
4. Choo, Y., and Klug, A. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 11168.
5. Nardelli, J., Gibson, T., and Charnay, P. (1992) Nucleic Acids Res. 20, 4137.
6. Desjarlais, J. R., and Berg, J. M. (1992) Proteins: Struct., Funct., Genet. 12, 101.
7. Thukral, S. K., Morrison, M. L., and Young, E. T. (1992) Mol. Cell Biol. 12, 2784.
8. Choo, Y., Sánchez-García, I., and Klug, A. (1994) Nature 372, 642.
9. Sardesai, N. Y., Zimmerman, K., and Barton, J. K. (1994) J. Am. Chem. Soc. 116, 7502.
10. Sardesai, N. Y., Lin, S. C., Zimmermann, K., and Barton, J. K. (1995) Bioconjugate Chem. 6, 302.
11. Sardesai, N. Y., and Barton, J. K. (1997) J. Biol. Inorg. Chem. 2, 762.
12. Sitlani, A., Long, E. C., Pyle, A. M., and Barton, J. K. (1992) J. Am. Chem. Soc. 114, 2303.
13. Caruthers, M. H., Barone, A. D., Beaucage, S. L., Dodds, D. R., Fisher, E. F., McBride, L. J., Matteucci, M., Stabinsky, Z., and Tang, J.-Y. (1987) Methods Enzymol. 154, 287.
14. Maniatis, T., Fritsch, E. F., and Sambrook, J. (1982) Molecular Cloning, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
15. Maxam, A. M., and Gilbert, W. (1977) Proc. Natl. Acad. Sci. U.S.A. 74, 560.
16. Lohmann, T. M., and Mascotti, D. P. (1992) Methods Enzymol. 212, 400-424.
17. Winzor, D. J., and Sayer, W. H. (1995) Quantitative Characterization of Ligand Binding, Wiley-Liss, New York.
18. B. A. Jackson, C. A. Hastings, B. P. Hudson, T. Johann, and J. K. Barton, unpublished results.
19. Dauber-Osguthorpe, P., Roberts, V. A., Osguthorpe, D. J., Wolff, J., Genest, M., and Hagler, A. T. (1988) Proteins: Struct., Funct., Genet. 4, 31.
20. Talanian, R. V., McKnight, C. J., and Kim, P. S. (1990) Science 249, 769.
21. Talanian, R. V., McKnight, C. J., Rutkowski, R., and Kim, P. S. (1992) Biochemistry 31, 6871.
22. Cuenoud, B., and Schepartz, A. (1993) Science 259, 510.
23. Lündback, T., Zilliacus, J., Gustaffson, J.-Å., Carlstedt-Duke, J., and Härd, T. (1994) Biochemistry 33, 5955.
24. Lündback, T., and Härd, T. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 4754.
25. Schultz, S. C., Shields, G. C., and Steitz, T. A. (1991) Science 253, 1001.
26. Raskin, C. A., Diaz, G., Joho, K., and McAllister, W. T. (1992) J. Mol. Biol. 228, 506.
27. Pomerantz, J. L., Pabo, C. O., and Sharp, P. A. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 9752.
28. Hudson, B. P., Dupureur, C. M., and Barton, J. K. (1995) J. Am. Chem. Soc. 117, 9379.
29. Hudson, B. P., and Barton, J. K. (1998) J. Am. Chem. Soc. 120, 6877-6888.
30. Parkinson, G., Wilson, C., Gunasekera, A., Ebright, Y. W., Ebright, R. E., and Berman, H. M. (1996) J. Mol. Biol. 260, 395.
31. Luisi, B. F., Xu, W. X, Otwinowski, Z., Freedman, L. P., Yamamoto, K. R., and Sigler, P. B. (1991) Nature 352, 497.
32. Fitzsimons, M. P., and Barton, J. K. (1997) J. Am. Chem. Soc. 119, 3379.
33. Chen, Y. H., Yang, J. T., and Martinez, H. M. (1972) Biochemistry 11, 4120.
34. Lehrman, S. R., Tuls, J. L., and Lund, M. (1990) Biochemistry 29, 5590.