Genotypic variations among isolates of Marasmius quercophilus, a white-rot fungus isolated from evergreen oak litter

Canadian Journal of Botany

Volumn 77, Issue 6, 1999, Pages 884-890

  Farnet, A M ^a   Roux, M ^a   Le Petit, J ^a  

^a CNRS   (France)

Author keywords

Intraspecific variability; ITS; Marasmius quercophilus; RAPD

Indexed keywords

GENE SEQUENCING; GENETIC VARIANCE; GENOTYPIC VARIATION; INTERNAL TRANSCRIBED SPACER; LITTER; MICROBIAL DEGRADATION; RANDOM AMPLIFIED POLYMORPHIC DNA; RIBOSOMAL RNA;

MARASMIUS QUERCOPHILUS;

EID: 0033495986     PISSN: 00084026     EISSN: None     Source Type: Journal    
DOI: 10.1139/b99-051     Document Type: Article

References (25)

1. Armstrong, J., Gibbs, A., Peakall, R., and, Weiller, G. 1997. RAPDistance programs, version 1.04 edition. Computer program distributed by the authors. Research School of Biological Sciences, Institute of Advanced Studies, Canberra, Australia.
2. Assigbetse, K.B., Fernandez, D., Dubois, M.P., and Geiger, J.P. 1994. Differentiation of Fusarium oxysporum f. sp. races on cotton by random amplified polymorphic DNA (RAPD) analysis. Phytopathology, 84: 622-626.
3. Barbero, M., and Loisel, R. 1983. Les chênaies vertes du sud-est de la France méditerranéenne: valeurs phytosociologiques, dynamiques et potentielles. Phytocoenologia, 11: 225-244.
4. Bidochka, M.J., McDonald, M.A, St. Leger, R.J., and Roberts, D.W. 1994. Differentiation of species and isolates of entomopathogenic fungi by random amplification of polymorphic DNA (RAPD). Curr. Genet. 25: 107-113.
5. Brunei, B., Périssol, C., Fernandez, M., Boeufgras, J.M., and Le Petit, J. 1994. Occurrence of Bacillus species on evergreen oak leaves. FEMS Microbiol. Ecol. 4: 331-342.
6. Chabert A., Le Petit, J., Loisel, R., Matheron, R., and Tagger, S. 1984. Dégradation biologique de la litière de chêne vert dans deux forêts de la région provençale (Var, France), Ecol. Mediterr. 1-2: 171-181.
7. Cooke, R.C., and Rayner, A.D.M. 1984. Ecology of saprotrophic fungi. Longman, London, U.K.
8. De la Bastide, P.Y., Kropp, B.R., and Piché, Y. 1994. Spatial distribution and temporal persistence of discrete genotypes of the ectomycorrhizal fungus Laccaria bicolor (Maire) Orton. New Phytol. 127: 547-556.
9. Demeke, T., Adams, R.P., and Chibbar, R. 1992. Potential taxonomic use random amplified polymorphic DNA (RAPD): a case study in Brassica. Theor. Appl. Genet. 84 : 990-994.
10. Edel, V., Steinberg, C., Gautheron, N., and Alabouvette, C. 1996. Evaluation of restriction analysis of polymerase chain reaction (PCR)-amplified ribosomal DNA for the identification of Fusarium species. Mycol. Res. 101: 179-187.
11. Fegan, M., Manners, J.M., Maclean, D.J., Irwin, J.A.G., Samuels, K.D.Z., Holdom, D.G., and Li, D.P. 1993. Random amplified polymorphic DNA markers reveal a high degree of genetic diversity in the entomopathogenic fungus Metarhizium anisopliae var. anisopliae, J. Gen. Microbiol. 139: 2075-2081.
12. Kirk, T.K., Schultz, E., Connors, W.J., Lorenz, L.F., and Zeikus J. 1978. Influence of culture parameters on lignin metabolism by Phanerochaete chrysosporium. Arch. Microbiol. 11: 277-285.
13. Kumeda, Y., and Asao, T. 1996. Single-strand conformation polymorphism analysis of PCR-amplified ribosomal DNA internal transcribed spacers to differentiate species of Aspergillus section Flavi. Appl. Environ. Microbiol. 62: 2947-2952.
14. Nei, M., and Li, W.H. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. U.S.A. 76: 5269-5273.
15. Overmeyer, C., Lünneman, S., Von Wallbrunn, C., and Meinhardt, F. 1996. Genetic variability among isolates and sexual offspring of the plant pathogenic fungus Calonectria morganii on the basis of random amplification of polymorphic DNA (RAPD) and restriction fragment length polymorphism (RFLP). Curr. Microbiol. 33: 249-255.
16. Périssol, C., Roux, M., and Le Petit, J. 1993. Succession of bacteria attached to evergreen oak leaf surfaces. Eur. J. Soil Biol. 29: 167-176.
17. Racon, L., Sadaka, N., Gil, G., Le Petit, J., Matheron, R., Poinsot-Balaguer, N., Sigoillot, J.C., and Woltz, P. 1987. Histological and chemical changes in tannic compounds of evergreen oak leaf litter. Can. J. Bot. 66: 663-667.
18. Rohel, E., Couteaudier, Y., Papierok, B., Cavelier, N., and Dedryver, C.A. 1997. Ribosomal internal transcribed spacer size variation correlated with RAPD-PCR pattern polymorphisms in the entomopathogenic fungus Erynia neoaphidis and some closely related species. Mycol. Res. 101: 573-579.
19. Saitou, N., and Nei, M. 1987. The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Ecol. 4: 406-425.
20. Tagger, S., Périssol, C., Gil, G., Vogt, G., and Le Petit J. 1998. Phenoloxidases of the white-rot fungus Marasmius quercophilus isolated from an evergreen oak litter (Quercus ilex, L.). Enzyme Microb. Technol. 23: 372-379.
21. Turner, D., Kovacs, W., Lieckfeld, E., Peter, B., Arisan-Atac, I., Strauss, J., Samuels, G.J., Borner, T., and Kubicek, C.P. 1997. Biogeography and phenotypic variation in Trichoderma sect. Longibrachiatum and associated Hypocrea species. Mycol. Res. 4: 449-459.
22. White, T.J., Bruns, T., Lee, S., and Taylor, J. 1990. PCR protocols: a guide to methods and applications. Academic Press, Inc.
23. Wildman, H.G. 1995. Influence of habitat on the physiological and metabolic diversity of fungi. Can. J. Bot. 73: 907-916.
24. Williams, J.G.K., Kubelik, A.R., Livak, K.J., Rafalski, J.A., and Tingey, S.V. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetics markers. Nucleic Acids Res. 18: 6531-6535.
25. Zimand, G., Valinsky, L., Elad, Y., Chet, I., and Manulis, S. 1994. Use of the RAPD procedure for the identification of Trichoderma isolates. Mycol. Res. 98: 531-534.