메뉴 건너뛰기




Volumn 48, Issue 3, 1999, Pages 665-674

Some limitations of ancestral character-state reconstruction when testing evolutionary hypotheses

Author keywords

[No Author keywords available]

Indexed keywords


EID: 0033442555     PISSN: 10635157     EISSN: None     Source Type: Journal    
DOI: 10.1080/106351599260238     Document Type: Article
Times cited : (154)

References (44)
  • 1
    • 0002421374 scopus 로고    scopus 로고
    • Classification and phylogeny in the Hydroidomedusae (Hydrozoa, Cnidaria)
    • BOERO, F., J. BOUILLON, AND S. PIRAINO. 1996. Classification and phylogeny in the Hydroidomedusae (Hydrozoa, Cnidaria). Sci. Marina 60:17-33.
    • (1996) Sci. Marina , vol.60 , pp. 17-33
    • Boero, F.1    Bouillon, J.2    Piraino, S.3
  • 3
    • 0001426873 scopus 로고
    • Irreversible evolution
    • BULL, J. J., AND E. L. CHARNOV. 1985. Irreversible evolution. Evolution 39:1149-1155.
    • (1985) Evolution , vol.39 , pp. 1149-1155
    • Bull, J.J.1    Charnov, E.L.2
  • 4
    • 12044252488 scopus 로고
    • Compositional bias, character-state bias, and character-state reconstruction using parsimony
    • COLLINS, T. M., P. H. WIMBERGER, AND G. J. P. NAYLOR. 1994. Compositional bias, character-state bias, and character-state reconstruction using parsimony. Syst. Biol. 43:482-496.
    • (1994) Syst. Biol. , vol.43 , pp. 482-496
    • Collins, T.M.1    Wimberger, P.H.2    Naylor, G.J.P.3
  • 5
    • 0031880429 scopus 로고    scopus 로고
    • Reconstructing ancestral character states: A critical reappraisal
    • CUNNINGHAM, C. W., K. E. OMLAND, AND T. H. OAKLEY. 1998. Reconstructing ancestral character states: a critical reappraisal. Trends Ecol. Evol. 13:361-366.
    • (1998) Trends Ecol. Evol. , vol.13 , pp. 361-366
    • Cunningham, C.W.1    Omland, K.E.2    Oakley, T.H.3
  • 7
    • 0000702318 scopus 로고
    • Facultative planktotrophy in the tropical echinoid Clypeaster rosaceus (Linnaeus) and a comparison with obligate planktotrophy in Clypeaster subdepressus (Gray) (Clypeasteroida: Echinoidea)
    • EMLET, R. B. 1986. Facultative planktotrophy in the tropical echinoid Clypeaster rosaceus (Linnaeus) and a comparison with obligate planktotrophy in Clypeaster subdepressus (Gray) (Clypeasteroida: Echinoidea). J. Exp. Mar. Biol. Ecol. 95:183-202.
    • (1986) J. Exp. Mar. Biol. Ecol. , vol.95 , pp. 183-202
    • Emlet, R.B.1
  • 8
    • 0025183043 scopus 로고
    • Correcting parsimonious trees for unseen nucleotide substitutions: The effect of dense branching as exemplified by RNAse
    • FITCH, W. M., AND J. J. BEINTEMA. 1990. Correcting parsimonious trees for unseen nucleotide substitutions: The effect of dense branching as exemplified by RNAse. Mol. Biol. Evol. 7:438-443.
    • (1990) Mol. Biol. Evol. , vol.7 , pp. 438-443
    • Fitch, W.M.1    Beintema, J.J.2
  • 9
    • 0028010308 scopus 로고
    • Using phylogenies to test hypotheses of adaptation: A critique of some current proposals
    • FRUMHOFF, P. C., AND H. H. REEVE. 1994. Using phylogenies to test hypotheses of adaptation: A critique of some current proposals. Evolution 48:172-180.
    • (1994) Evolution , vol.48 , pp. 172-180
    • Frumhoff, P.C.1    Reeve, H.H.2
  • 10
    • 12044254698 scopus 로고
    • Evaluating the phylogenetic utility of genes: A search for genes informative about deep divergences among vertebrates
    • GRAYBEAL, A. 1994. Evaluating the phylogenetic utility of genes: A search for genes informative about deep divergences among vertebrates. Syst. Biol. 43:174-193.
    • (1994) Syst. Biol. , vol.43 , pp. 174-193
    • Graybeal, A.1
  • 11
    • 0029661476 scopus 로고    scopus 로고
    • Evolutionary loss of larval feeding: Development, form and function in a facultatively feeding larva, Brisaster latifrons
    • HART, M.W. 1996. Evolutionary loss of larval feeding: Development, form and function in a facultatively feeding larva, Brisaster latifrons. Evolution 50:174-187.
    • (1996) Evolution , vol.50 , pp. 174-187
    • Hart, M.W.1
  • 12
    • 0031427432 scopus 로고    scopus 로고
    • Molecular phylogenetic analysis of life-history evolution in asterinid starfish
    • HART, M. W., M. BYRNE, AND M. J. SMITH. 1997. Molecular phylogenetic analysis of life-history evolution in asterinid starfish. Evolution 51:1848-1861.
    • (1997) Evolution , vol.51 , pp. 1848-1861
    • Hart, M.W.1    Byrne, M.2    Smith, M.J.3
  • 15
    • 11944267432 scopus 로고
    • Phylogenetic relationships and orthogenetic evolution of coat color among Tamarins (Genus Saguinus)
    • JACOBS, S. C., A. LARSON, AND J. M. CHEVERUD. 1995. Phylogenetic relationships and orthogenetic evolution of coat color among Tamarins (Genus Saguinus). Syst. Biol. 44:515-532.
    • (1995) Syst. Biol. , vol.44 , pp. 515-532
    • Jacobs, S.C.1    Larson, A.2    Cheverud, J.M.3
  • 16
    • 0029881442 scopus 로고    scopus 로고
    • Probabilistic reconstruction of ancestral protein sequences
    • KOSHI, J. M., AND R. A. GOLDSTEIN. 1996. Probabilistic reconstruction of ancestral protein sequences. J. Mol. Evol. 42:313-320.
    • (1996) J. Mol. Evol. , vol.42 , pp. 313-320
    • Koshi, J.M.1    Goldstein, R.A.2
  • 17
    • 0021277009 scopus 로고
    • A new method for calculating evolutionary substitution rates
    • LANAVE, C., G. PREPARATA, C. SACCONE, AND G. SERIO. 1984. A new method for calculating evolutionary substitution rates. J. Mol. Evol. 20:86-93.
    • (1984) J. Mol. Evol. , vol.20 , pp. 86-93
    • Lanave, C.1    Preparata, G.2    Saccone, C.3    Serio, G.4
  • 18
    • 0001934652 scopus 로고
    • Evolutionary mechanisms of limbloss in tetrapods
    • LANDE, R. 1978. Evolutionary mechanisms of limbloss in tetrapods. Evolution 32:73-92.
    • (1978) Evolution , vol.32 , pp. 73-92
    • Lande, R.1
  • 19
    • 0028094163 scopus 로고
    • Phylogenetic methods for inferring the evolutionary history and processes of change in discretely valued characters
    • MADDISON, D. R. 1994. Phylogenetic methods for inferring the evolutionary history and processes of change in discretely valued characters. Annu. Rev. Entomol. 267-292.
    • (1994) Annu. Rev. Entomol. , pp. 267-292
    • Maddison, D.R.1
  • 20
    • 0029468058 scopus 로고
    • Calculating the probability distributions of ancestral states reconstructed by parsimony on phylogenetic trees
    • MADDISON, W.P. 1995. Calculating the probability distributions of ancestral states reconstructed by parsimony on phylogenetic trees. Syst. Biol. 44:474-481.
    • (1995) Syst. Biol. , vol.44 , pp. 474-481
    • Maddison, W.P.1
  • 23
    • 0030727017 scopus 로고    scopus 로고
    • Examining two standard assumptions of ancestral reconstructions: Repeated loss of dichromatism in dabbling ducks (Anatini)
    • OMLAND, K. E. 1997. Examining two standard assumptions of ancestral reconstructions: Repeated loss of dichromatism in dabbling ducks (Anatini). Evolution 51:1636-1646.
    • (1997) Evolution , vol.51 , pp. 1636-1646
    • Omland, K.E.1
  • 24
    • 0031421806 scopus 로고    scopus 로고
    • Inferring evolutionary processes from phylogenies
    • PAGEL, M. 1998. Inferring evolutionary processes from phylogenies. Zool. Scr. 26:331-348.
    • (1998) Zool. Scr. , vol.26 , pp. 331-348
    • Pagel, M.1
  • 25
    • 0033422611 scopus 로고    scopus 로고
    • The maximum likelihood approach to reconstructing ancestral character states of discrete characters on phylogenies
    • PAGEL, M. 1999. The maximum likelihood approach to reconstructing ancestral character states of discrete characters on phylogenies. Syst. Biol. 48:612-622.
    • (1999) Syst. Biol. , vol.48 , pp. 612-622
    • Pagel, M.1
  • 26
    • 0002062890 scopus 로고
    • The adaptationist wager
    • (P. Eggleton and R. I. Vane-Wright, eds.). Academic Press, London
    • PAGEL, M. 1994a. The adaptationist wager. Pages 29-52 in Phylogenetics and ecology (P. Eggleton and R. I. Vane-Wright, eds.). Academic Press, London.
    • (1994) Phylogenetics and Ecology , pp. 29-52
    • Pagel, M.1
  • 27
    • 0028097770 scopus 로고
    • Detecting correlated evolution on phylogenies: A general method for the comparative analysis of discrete characters
    • PAGEL, M. 1994b. Detecting correlated evolution on phylogenies: A general method for the comparative analysis of discrete characters. Proc. R. Soc. Lond. Ser. B 255:37-45.
    • (1994) Proc. R. Soc. Lond. Ser. B , vol.255 , pp. 37-45
    • Pagel, M.1
  • 28
    • 0009068406 scopus 로고
    • Implications of radical evolutionary changes in early development for concepts of development constraint
    • (L. A. H. K. Warren, ed.). University of Chicago Press, Chicago, Illinois
    • RAFF, R. A., G. A. WRAY, AND J. J. HENRY. 1990. Implications of radical evolutionary changes in early development for concepts of development constraint. Pages 189-208 in Evolutionary innovations (L. A. H. K. Warren, ed.). University of Chicago Press, Chicago, Illinois.
    • (1990) Evolutionary Innovations , pp. 189-208
    • Raff, R.A.1    Wray, G.A.2    Henry, J.J.3
  • 29
    • 0033413219 scopus 로고    scopus 로고
    • Inferring rates of change in flower symmetry in asterid angiosperms
    • In press
    • REE, R. H., AND M. J. DONOGHUE. In press. Inferring rates of change in flower symmetry in asterid angiosperms. Syst. Biol. 48:633-641.
    • Syst. Biol. , vol.48 , pp. 633-641
    • Ree, R.H.1    Donoghue, M.J.2
  • 30
    • 0001201079 scopus 로고
    • Reversibility in evolution: A maximum likelihood approach to character gain-loss bias in phylogenies
    • SANDERSON, M. J. 1993. Reversibility in evolution: A maximum likelihood approach to character gain-loss bias in phylogenies. Evolution 47:236-252.
    • (1993) Evolution , vol.47 , pp. 236-252
    • Sanderson, M.J.1
  • 31
    • 0029149610 scopus 로고
    • Uncertainty in ancient phylogenies
    • SCHLUTER, D. 1995. Uncertainty in ancient phylogenies. Nature 377:108-109.
    • (1995) Nature , vol.377 , pp. 108-109
    • Schluter, D.1
  • 32
    • 0031417707 scopus 로고    scopus 로고
    • Likelihood of ancestor states in adaptive radiation
    • SCHLUTER, D., T. PRICE, A. Ø. MOOERS, AND D. LUDWIG. 1997. Likelihood of ancestor states in adaptive radiation. Evolution 51:1699-1711.
    • (1997) Evolution , vol.51 , pp. 1699-1711
    • Schluter, D.1    Price, T.2    Mooers, A.Ø.3    Ludwig, D.4
  • 33
    • 0029731915 scopus 로고    scopus 로고
    • The reconstruction of ancestral character states
    • SCHULTZ, T. R., R. B. COCROFT, AND G. A. CHURCHILL. 1996. The reconstruction of ancestral character states. Evolution 50:504-511.
    • (1996) Evolution , vol.50 , pp. 504-511
    • Schultz, T.R.1    Cocroft, R.B.2    Churchill, G.A.3
  • 35
    • 0001095073 scopus 로고
    • The evolution and loss of feeding larval stages of marine invertebrates
    • STRATHMANN, R. R. 1978. The evolution and loss of feeding larval stages of marine invertebrates. Evolution 32:894-906.
    • (1978) Evolution , vol.32 , pp. 894-906
    • Strathmann, R.R.1
  • 36
    • 0022167566 scopus 로고
    • Feeding and nonfeeding larval development and life-history evolution in marine invertebrates
    • STRATHMANN, R. R. 1985. Feeding and nonfeeding larval development and life-history evolution in marine invertebrates. Ann. Rev. Ecol. Syst. 16:339-362.
    • (1985) Ann. Rev. Ecol. Syst. , vol.16 , pp. 339-362
    • Strathmann, R.R.1
  • 37
    • 0027333469 scopus 로고
    • Hypotheses on the origins of marine larvae
    • STRATHMANN, R. R. 1993. Hypotheses on the origins of marine larvae. Ann. Rev. Ecol. Syst. 24:89-117.
    • (1993) Ann. Rev. Ecol. Syst. , vol.24 , pp. 89-117
    • Strathmann, R.R.1
  • 38
    • 0000142497 scopus 로고
    • Reconstructing ancestral character states under Wagner parsimony
    • SWOFFORD, D. L., AND W. P. MADDISON. 1987. Reconstructing ancestral character states under Wagner parsimony. Math. Biosci. 87:199-229.
    • (1987) Math. Biosci. , vol.87 , pp. 199-229
    • Swofford, D.L.1    Maddison, W.P.2
  • 39
    • 0001056906 scopus 로고
    • Parsimony, character-state reconstructions, and evolutionary inferences
    • (R. L. Mayden, ed.). Stanford University Press, Stanford, California
    • SWOFFORD, D. L., AND W. P. MADDISON. 1992. Parsimony, character-state reconstructions, and evolutionary inferences. Pages 186-223 in Systematics, historical ecology, and North American freshwater fishes (R. L. Mayden, ed.). Stanford University Press, Stanford, California.
    • (1992) Systematics, Historical Ecology, and North American Freshwater Fishes , pp. 186-223
    • Swofford, D.L.1    Maddison, W.P.2
  • 40
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • (D. M. Hillis, C. Moritz, and B. K. Mable, eds.). Sinauer Associates, Sunderland, Massachusetts
    • SWOFFORD, D. L., G. J. OLSEN, P. J. WADDELL, AND D. M. HILLIS. 1996. Phylogenetic inference. Pages 407-514 in Molecular systematics, 2nd edition (D. M. Hillis, C. Moritz, and B. K. Mable, eds.). Sinauer Associates, Sunderland, Massachusetts.
    • (1996) Molecular Systematics, 2nd Edition , pp. 407-514
    • Swofford, D.L.1    Olsen, G.J.2    Waddell, P.J.3    Hillis, D.M.4
  • 41
    • 0030313331 scopus 로고    scopus 로고
    • Parallel evolution of nonfeeding larvae in echinoids
    • WRAY, G. A. 1996. Parallel evolution of nonfeeding larvae in echinoids. Syst. Biol. 45:308-322.
    • (1996) Syst. Biol. , vol.45 , pp. 308-322
    • Wray, G.A.1
  • 42
    • 0026049889 scopus 로고
    • The evolution of developmental strategy in marine invertebrates
    • WRAY, G. A., AND R. A. RAFF. 1991. The evolution of developmental strategy in marine invertebrates. Trends Ecol. Evol. 6:45-50.
    • (1991) Trends Ecol. Evol. , vol.6 , pp. 45-50
    • Wray, G.A.1    Raff, R.A.2
  • 43
    • 0030451420 scopus 로고    scopus 로고
    • Among-site rate variation and its impact on phylogenetic analyses
    • YANG, Z. 1996. Among-site rate variation and its impact on phylogenetic analyses. Trends Ecol. Evol. 11:367-372.
    • (1996) Trends Ecol. Evol. , vol.11 , pp. 367-372
    • Yang, Z.1
  • 44
    • 0028820333 scopus 로고
    • A new method of inference of ancestral nucleotide and amino acid sequences
    • YANG, Z., S. KUMAR, AND M. NEI. 1995. A new method of inference of ancestral nucleotide and amino acid sequences. Genetics 141:1641-1650.
    • (1995) Genetics , vol.141 , pp. 1641-1650
    • Yang, Z.1    Kumar, S.2    Nei, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.