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Volumn 9, Issue 3, 1999, Pages 567-590

The ages of mutation in gene trees

(2)  Griffiths, R C a   Tavaré, Simon a  

a NONE

Author keywords

Ages of mutations; Ancestral inference; Coalescent process; Gene trees; Population genetics; Samples of DNA

Indexed keywords


EID: 0033249368     PISSN: 10505164     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (43)

References (33)
  • 2
    • 0029559462 scopus 로고
    • Coalescents and genealogical structure under neutrality
    • DONNELLY, P. and TAVARÉ, S. (1995). Coalescents and genealogical structure under neutrality. Ann. Rev. Genet. 29 401-421.
    • (1995) Ann. Rev. Genet. , vol.29 , pp. 401-421
    • Donnelly, P.1    Tavaré, S.2
  • 3
    • 0001551535 scopus 로고
    • The infinitely-many-sites-model as a measure valued diffusion
    • ETHIER, S. and GRIFFITHS, R. C. (1987). The infinitely-many-sites-model as a measure valued diffusion. Ann. Probab. 15 515-545.
    • (1987) Ann. Probab. , vol.15 , pp. 515-545
    • Ethier, S.1    Griffiths, R.C.2
  • 5
    • 0015310384 scopus 로고
    • The sampling theory of selectively neutral alleles
    • EWENS, W. J. (1972). The sampling theory of selectively neutral alleles. Theoret. Population Biol. 3 87-112.
    • (1972) Theoret. Population Biol. , vol.3 , pp. 87-112
    • Ewens, W.J.1
  • 6
    • 0008784062 scopus 로고
    • Matrix inversion by the Monte Carlo method
    • FORSYTHE, G. E. and LEIBLER, R. A. (1950). Matrix inversion by the Monte Carlo method. Math. Comp. 26 127-129.
    • (1950) Math. Comp. , vol.26 , pp. 127-129
    • Forsythe, G.E.1    Leibler, R.A.2
  • 7
    • 0031038941 scopus 로고    scopus 로고
    • Estimating the age of the common ancestor of a sample of DNA sequences
    • FU, Y.-X. and LI, W.-H. (1997). Estimating the age of the common ancestor of a sample of DNA sequences. Mol. Biol. Evol. 14 195-199.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 195-199
    • Fu, Y.-X.1    Li, W.-H.2
  • 8
    • 0028345409 scopus 로고
    • Molecular and population genetic analysis of allelic sequence diversity at the human β-globin locus
    • FULLERTON, S. M., HARDING, R. M., BOYCE, A. J. and CLEGG, J. B. (1994). Molecular and population genetic analysis of allelic sequence diversity at the human β-globin locus. Proc. Nat. Acad. Sci. U.S.A. 91 1805-1809.
    • (1994) Proc. Nat. Acad. Sci. U.S.A. , vol.91 , pp. 1805-1809
    • Fullerton, S.M.1    Harding, R.M.2    Boyce, A.J.3    Clegg, J.B.4
  • 9
    • 0024796326 scopus 로고
    • Genealogical-tree probabilities in the infinitely-many-site model
    • GRIFFITHS, R. C. (1989). Genealogical-tree probabilities in the infinitely-many-site model. J. Math. Biol. 27 667-680.
    • (1989) J. Math. Biol. , vol.27 , pp. 667-680
    • Griffiths, R.C.1
  • 10
    • 0030498194 scopus 로고    scopus 로고
    • Ancestral inference from samples of DNA sequences with recombination
    • GRIFFITHS, R. C. and MARJORAM, P. (1996). Ancestral inference from samples of DNA sequences with recombination. J. Comp. Biol. 3 479-502.
    • (1996) J. Comp. Biol. , vol.3 , pp. 479-502
    • Griffiths, R.C.1    Marjoram, P.2
  • 11
    • 34548452457 scopus 로고
    • Simulating probability distributions in the coalescent
    • GRIFFITHS, R. C. and TAVARÉ, S. (1994a). Simulating probability distributions in the coalescent. Theoret. Population Biol. 46 131-159.
    • (1994) Theoret. Population Biol. , vol.46 , pp. 131-159
    • Griffiths, R.C.1    Tavaré, S.2
  • 12
    • 84972539388 scopus 로고
    • Ancestral inference in population genetics
    • GRIFFITHS, R. C. and TAVARÉ, S. (1994b). Ancestral inference in population genetics. Statist. Sci. 9 307-319.
    • (1994) Statist. Sci. , vol.9 , pp. 307-319
    • Griffiths, R.C.1    Tavaré, S.2
  • 13
    • 0028782096 scopus 로고
    • Sampling theory for neutral alleles in a varying environment
    • GRIFFITHS, R. C. and TAVARÉ, S. (1994c). Sampling theory for neutral alleles in a varying environment. Proc. Roy. Soc. London Ser. B 344 403-410.
    • (1994) Proc. Roy. Soc. London Ser. B , vol.344 , pp. 403-410
    • Griffiths, R.C.1    Tavaré, S.2
  • 14
    • 0028905057 scopus 로고
    • Unrooted genealogical tree probabilities in the infinitely many-sites model
    • GRIFFITHS, R. C. and TAVARÉ, S. (1995). Unrooted genealogical tree probabilities in the infinitely many-sites model. Math. Biosci. 127 77-98.
    • (1995) Math. Biosci. , vol.127 , pp. 77-98
    • Griffiths, R.C.1    Tavaré, S.2
  • 15
    • 0001301442 scopus 로고    scopus 로고
    • The age of a mutation in a general coalescent tree
    • GRIFFITHS, R. C. and TAVARÉ, S. (1998). The age of a mutation in a general coalescent tree. Stoch. Models 14 273-295.
    • (1998) Stoch. Models , vol.14 , pp. 273-295
    • Griffiths, R.C.1    Tavaré, S.2
  • 16
    • 84987049379 scopus 로고
    • Efficient algorithms for inferring evolutionary trees
    • GUSFIELD, D. (1991). Efficient algorithms for inferring evolutionary trees. Networks 21 19-28.
    • (1991) Networks , vol.21 , pp. 19-28
    • Gusfield, D.1
  • 17
    • 0014705837 scopus 로고
    • A retrospective and prospective study of the Monte Carlo method
    • HALTON, J. H. (1970). A retrospective and prospective study of the Monte Carlo method. SIAM Rev. 12 1-63.
    • (1970) SIAM Rev. , vol.12 , pp. 1-63
    • Halton, J.H.1
  • 20
    • 0020744702 scopus 로고
    • Properties of a neutral allele model with intragenic recombination
    • HUDSON, R. R. (1983). Properties of a neutral allele model with intragenic recombination. Theoret. Population Biol. 23 183-201.
    • (1983) Theoret. Population Biol. , vol.23 , pp. 183-201
    • Hudson, R.R.1
  • 21
    • 0001935493 scopus 로고
    • Gene genealogies and the coalescent process
    • (D. Futuyma and J. Antonovics, eds.) Oxford Univ. Press
    • HUDSON, R. R. (1991). Gene genealogies and the coalescent process. In Oxford Surveys in Evolutionary Biology (D. Futuyma and J. Antonovics, eds.) 7 1-44. Oxford Univ. Press.
    • (1991) Oxford Surveys in Evolutionary Biology , vol.7 , pp. 1-44
    • Hudson, R.R.1
  • 22
    • 0015862142 scopus 로고
    • The age of a neutral mutant persisting in a finite population
    • KIMURA, M. and OHTA, T. (1973). The age of a neutral mutant persisting in a finite population. Genetics 75 199-212.
    • (1973) Genetics , vol.75 , pp. 199-212
    • Kimura, M.1    Ohta, T.2
  • 23
    • 0002556819 scopus 로고
    • On the genealogy of large populations
    • KINGMAN, J. F. C. (1982a). On the genealogy of large populations. J. Appl. Probab. 19A 27-43.
    • (1982) J. Appl. Probab. , vol.19 A , pp. 27-43
    • Kingman, J.F.C.1
  • 25
    • 0002743467 scopus 로고
    • Exchangeability and the evolution of large populations
    • (G. Koch and F. Spizzichino, eds.) North-Holland, Amsterdam
    • KINGMAN, J. F. C. (1982c). Exchangeability and the evolution of large populations. In Exchangeability in Probability and Statistics (G. Koch and F. Spizzichino, eds.) 97-112. North-Holland, Amsterdam.
    • (1982) Exchangeability in Probability and Statistics , pp. 97-112
    • Kingman, J.F.C.1
  • 26
    • 0029027992 scopus 로고
    • Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling
    • KUHNER, M. K., YAMATO, J. and FELSENSTEIN, J. (1995). Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling. Genetics 140 1421-1430.
    • (1995) Genetics , vol.140 , pp. 1421-1430
    • Kuhner, M.K.1    Yamato, J.2    Felsenstein, J.3
  • 27
    • 0001085724 scopus 로고
    • On the genealogy of nested subsamples from a haploid population
    • SAUNDERS, I. W., TAVARÉ, S. and WATTERSON, G. A. (1984). On the genealogy of nested subsamples from a haploid population. Adv. in Appl. Probab. 16 471-491.
    • (1984) Adv. in Appl. Probab. , vol.16 , pp. 471-491
    • Saunders, I.W.1    Tavaré, S.2    Watterson, G.A.3
  • 28
    • 0025951996 scopus 로고
    • Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations
    • SLATKIN, M. and HUDSON, R. R. (1991). Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations. Genetics 129 555-562.
    • (1991) Genetics , vol.129 , pp. 555-562
    • Slatkin, M.1    Hudson, R.R.2
  • 29
    • 0021066244 scopus 로고
    • Evolutionary relationships of DNA sequences in finite populations
    • TAJIMA, F. (1983). Evolutionary relationships of DNA sequences in finite populations. Genetics 105 437-460.
    • (1983) Genetics , vol.105 , pp. 437-460
    • Tajima, F.1
  • 30
    • 0031014291 scopus 로고    scopus 로고
    • Inferring coalescence times from DNA sequence data
    • TAVARÉ, S., BALDING, D., GRIFFITHS R. C. and DONNELLY, P. (1997). Inferring coalescence times from DNA sequence data. Genetics 145 505-518.
    • (1997) Genetics , vol.145 , pp. 505-518
    • Tavaré, S.1    Balding, D.2    Griffiths, R.C.3    Donnelly, P.4
  • 31
    • 0016491430 scopus 로고
    • On the number of segregating sites in genetical models without recombination
    • WATTERSON, G. A. (1975). On the number of segregating sites in genetical models without recombination. Theoret. Population Biol. 7 256-276.
    • (1975) Theoret. Population Biol. , vol.7 , pp. 256-276
    • Watterson, G.A.1
  • 32
    • 0009385574 scopus 로고    scopus 로고
    • Motoo Kimura's use of diffusion theory in population genetics
    • WATTERSON, G. A. (1996). Motoo Kimura's use of diffusion theory in population genetics. Theoret. Population Biol. 49 154-188.
    • (1996) Theoret. Population Biol. , vol.49 , pp. 154-188
    • Watterson, G.A.1
  • 33
    • 0028805878 scopus 로고
    • Sequence variation of the human Y chromosome
    • WHITFIELD, L. S., SULSTON, J. E. AND GOODFELLOW, P. N. (1995). Sequence variation of the human Y chromosome. Nature 378 379-380.
    • (1995) Nature , vol.378 , pp. 379-380
    • Whitfield, L.S.1    Sulston, J.E.2    Goodfellow, P.N.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.