Adaptive walks on time-dependent fitness landscapes

Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics

Volumn 60, Issue 2, 1999, Pages 2154-2159

  Wilke, Claus O ^a   Martinetz, Thomas ^a  

^a RUHR UNIVERSITY BOCHUM   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

BIOLOGICAL MODEL; COMPUTER SIMULATION; ENVIRONMENT; EVOLUTION; GENETIC SELECTION; GENETICS; MOLECULAR EVOLUTION; POPULATION GENETICS; TIME;

BIOLOGICAL EVOLUTION; COMPUTER SIMULATION; ENVIRONMENT; EVOLUTION, MOLECULAR; GENETICS, POPULATION; MODELS, GENETIC; PROTEINS; SELECTION, GENETIC; TIME FACTORS;

EID: 0033180715     PISSN: 1063651X     EISSN: None     Source Type: Journal    
DOI: 10.1103/PhysRevE.60.2154     Document Type: Article

References (35)

1. M. Kimura, The Neutral Theory of Molecular Evolution (Cambridge University Press, Cambridge, MA, 1984).
2. W. J. Ewens, Mathematical Population Genetics (Springer-Verlag, New York, 1979).
3. J. S. Gale, Theoretical Population Genetics (Unwin Hyman, London, 1990).
4. S. A. Kauffman, The Origins of Order (Oxford University Press, Oxford, 1992).
5. H. I. Freedman, Deterministic Mathematical Models in Population Ecology (Marcel Dekker, New York, 1980).
6. Mathematical Ecology. An Introduction, edited by T. G. Hallam and S. A. Levin (Springer-Verlag, New York, 1986).
7. W. D. Hillis, in Artificial Life II, edited by C. G. Langton, C. Taylor, J. D. Farmer, and S. Rasmussen (Addison-Wesley, Reading, MA, 1991), pp. 313–324.
8. S. A. Kauffman and S. Johnsen, J. Theor. Biol. 149, 467 (1991).
9. C. W. Reynolds, in Artificial Life IV, edited by R. A. Brooks and P. Maes (MIT Press, Cambridge, MA, 1994), pp. 59–69.
10. B. Charlesworth, Genet. Res. 61, 205 (1993).
11. R. Lande and S. Shannon, Evolution (Lawrence, Kans.) 50, 434 (1996).
12. K. Ishii, H. Matsuda, Y. Iwasa, and A. Sasaki, Genetics 121, 163 (1989).
13. T. Bäck, in Proceedings of the 1998 IEEE International Conference on Evolutionary Computation (IEEE Press, Piscataway, NJ, 1998), pp. 446–451.
14. A. J. Hirst and J. E. Rowe, J. Theor. Biol. (to be published).
15. C. V. Forst, C. Reidys, and J. Weber, in Advances in Artificial Life, Vol. 929 of Lecture Notes in Artificial Intelligence, ECAL ’95, edited by F. Morán, A. Moreno, J. Merelo, and P. Chacón (Springer, Berlin, New York, 1995), pp. 128–147, SFI Report No. 95-10-094.
16. M. A. Huynen, P. F. Stadler, and W. Fontana, Proc. Natl. Acad. Sci. USA 93, 397 (1996).
17. C. Reidys, P. F. Stadler, and P. Schuster, Bull. Math. Biol. 59, 339 (1997), SFI Report No. 95-07-058.
18. A. Babajide, I. L. Hofacker, M. J. Sippl, and P. F. Stadler, Folding Des. 2, 261 (1997), SFI Report No. 96-12-085.
19. C. V. Forst, J. Biotechnology 64, 101 (1998).
20. S. Benner and A. D. Ellington, Crit. Rev. Biochem. 23, 369 (1988).
21. M. Kreitman and H. Akashi, Annu. Rev. Ecol. Syst. 26, 403 (1995).
22. M. Kreitman, BioEssays 18, 678 (1996).
23. M. Kreitman, Nature (London) 304, 412 (1983).
24. A. Berry and M. Kreitman, Genetics 134, 869 (1993).
25. J. W. Thatcher, J. M. Shaw, and W. J. Dickinson, Proc. Natl. Acad. Sci. USA 95, 253 (1998).
26. J. H. Gillespie, Am. Nat. 121, 691 (1983).
27. C. Adami, Introduction to Artificial Life (Telos, Springer-Verlag Publishers, Santa Clara, 1998).
28. S. A. Kauffman and E. D. Weinberger, J. Theor. Biol. 141, 211 (1989).
29. B. Levitan and S. Kauffman, Molecular Diversity 1, 53 (1995).
30. B. Levitan, in Annual Reports in Combinatorial Chemistry and Molecular Diversity, edited by M. R. Pavia, W. H. Moos, A. D. Ellington, and B. K. Kay (ESCOM Publishers, Leiden, 1997), Vol. 1, pp. 95–152.
31. E. van Nimwegen, J. P. Crutchfield, and M. Mitchell, Phys. Lett. A 229, 144 (1997).
32. E. van Nimwegen, J. P. Crutchfield, and M. Mitchell, Theor. Comput. Sci. (to be published) (SFI Report No. 97-04-035).
33. J. P. Crutchfield and E. van Nimwegen, in Evolution as Computation, Lecture Notes in Computer Science, edited by L. F. Landweber, E. Winfree, R. Lipton, and S. Freeland (Springer-Verlag, New York, 1999).
34. D. Stauffer and A. Aharony, Introduction to Percolation Theory, 2nd ed. (Taylor & Francis, Basingstoke Hants, UK, 1992).
35. M. Eigen, J. McCaskill, and P. Schuster, Adv. Chem. Phys. 75, 149 (1989).