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Volumn 13, Issue 15, 1999, Pages 2005-2016

A novel property of the RecA nucleoprotein filament: Activation of double-stranded DNA for strand exchange in trans

Author keywords

Genetic recombination; Homology recognition; Protein DNA interactions

Indexed keywords

DOUBLE STRANDED DNA; RECA PROTEIN;

EID: 0033180144     PISSN: 08909369     EISSN: None     Source Type: Journal    
DOI: 10.1101/gad.13.15.2005     Document Type: Article
Times cited : (20)

References (38)
  • 1
    • 0026751086 scopus 로고
    • Semi-dominant suppressors of Srs2 helicase mutations of Saccharomyces cerevisiae map in the RAD51 gene, whose sequence predicts a protein with similarities to procaryotic RecA proteins
    • Aboussekhra, A., R. Chanet, A. Adjiri, and F. Fabre. 1992. Semi-dominant suppressors of Srs2 helicase mutations of Saccharomyces cerevisiae map in the RAD51 gene, whose sequence predicts a protein with similarities to procaryotic RecA proteins. Mol. Cell. Biol. 12: 3224-3234.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 3224-3234
    • Aboussekhra, A.1    Chanet, R.2    Adjiri, A.3    Fabre, F.4
  • 2
    • 0022160321 scopus 로고
    • E. Coli recA protein possesses a strand separating actvity on short duplex DNAs
    • Bianchi, M., B. Riboli, and G. Magni. 1985. E. coli recA protein possesses a strand separating actvity on short duplex DNAs. EMBO J. 4: 3025-3030.
    • (1985) EMBO J. , vol.4 , pp. 3025-3030
    • Bianchi, M.1    Riboli, B.2    Magni, G.3
  • 3
    • 0001865832 scopus 로고    scopus 로고
    • DNA strand exchange proteins: A biochemical and physical comparison
    • Bianco, P.R., R.B. Tracy, and S.C. Kowalczykowski. 1998. DNA strand exchange proteins: A biochemical and physical comparison. Front. Biosci. 3: D570-D603.
    • (1998) Front. Biosci. , vol.3
    • Bianco, P.R.1    Tracy, R.B.2    Kowalczykowski, S.C.3
  • 4
    • 0026697166 scopus 로고
    • DMC1: A meiosis-specific yeast homolog of E. Coli recA required for recombination, synaptonemal complex formation, and cell cycle progression
    • Bishop, D.K., D. Park, L. Xu, and N. Kleckner. 1992. DMC1: A meiosis-specific yeast homolog of E. coli recA required for recombination, synaptonemal complex formation, and cell cycle progression. Cell 69: 439-456.
    • (1992) Cell , vol.69 , pp. 439-456
    • Bishop, D.K.1    Park, D.2    Xu, L.3    Kleckner, N.4
  • 5
    • 0030949953 scopus 로고    scopus 로고
    • Evolutionary comparisons of RecA-like proteins across all major kingdoms of living organisms
    • Brendel, V., L. Brocchieri, S.J. Sandler, A.J. Clark, and S. Karlin. 1997. Evolutionary comparisons of RecA-like proteins across all major kingdoms of living organisms. J. Mol. Evol. 44: 528-541.
    • (1997) J. Mol. Evol. , vol.44 , pp. 528-541
    • Brendel, V.1    Brocchieri, L.2    Sandler, S.J.3    Clark, A.J.4    Karlin, S.5
  • 6
    • 0004519761 scopus 로고
    • Ionic inhibition of formation of recA nucleoprotein networks blocks homologous pairing
    • Chow, S.A. and C.M. Radding. 1985. Ionic inhibition of formation of recA nucleoprotein networks blocks homologous pairing. Proc. Natl. Acad. Sci. 82: 5646-5650.
    • (1985) Proc. Natl. Acad. Sci. , vol.82 , pp. 5646-5650
    • Chow, S.A.1    Radding, C.M.2
  • 7
    • 0025290268 scopus 로고
    • Underwinding of DNA associated with duplex-duplex pairing by RecA protein
    • Conley, E.C. and S.C. West. 1990. Underwinding of DNA associated with duplex-duplex pairing by RecA protein. J. Biol. Chem. 265: 10156-10163.
    • (1990) J. Biol. Chem. , vol.265 , pp. 10156-10163
    • Conley, E.C.1    West, S.C.2
  • 8
    • 0019853508 scopus 로고
    • Directionality and polarity in recA protein-promoted branch migration
    • Cox, M.M. and I.R. Lehman. 1981. Directionality and polarity in recA protein-promoted branch migration. Proc. Natl. Acad. Sci. 78: 6018-6022.
    • (1981) Proc. Natl. Acad. Sci. , vol.78 , pp. 6018-6022
    • Cox, M.M.1    Lehman, I.R.2
  • 9
    • 0018736208 scopus 로고
    • Single strands induce recA protein to unwind duplex DNA for homologous pairing
    • Cunningham, R.P., T. Shibata, C. DasGupta, and C.M. Radding. 1979. Single strands induce recA protein to unwind duplex DNA for homologous pairing. Nature 281: 191-195.
    • (1979) Nature , vol.281 , pp. 191-195
    • Cunningham, R.P.1    Shibata, T.2    DasGupta, C.3    Radding, C.M.4
  • 10
    • 0031470610 scopus 로고    scopus 로고
    • Recombination initiation: Easy as A, B, C, D... chi?
    • Eggleston, A.K. and S.C. West. 1997. Recombination initiation: Easy as A, B, C, D... chi? Curr. Biol. 7: R745-R749.
    • (1997) Curr. Biol. , vol.7
    • Eggleston, A.K.1    West, S.C.2
  • 11
    • 0020567929 scopus 로고
    • Indirect stimulation of genetic recombination
    • Golub, E.I. and K.B. Low. 1983. Indirect stimulation of genetic recombination. Proc. Natl. Acad. Sci. 80: 1401-1405.
    • (1983) Proc. Natl. Acad. Sci. , vol.80 , pp. 1401-1405
    • Golub, E.I.1    Low, K.B.2
  • 12
    • 0021944555 scopus 로고
    • RecA protein rapidly crystallizes in the presence of spermidine: A valuable step in its purification and physical characterization
    • Griffith, J. and C.G. Shores. 1985. RecA protein rapidly crystallizes in the presence of spermidine: A valuable step in its purification and physical characterization. Biochemistry 24: 158-162.
    • (1985) Biochemistry , vol.24 , pp. 158-162
    • Griffith, J.1    Shores, C.G.2
  • 13
    • 0021337860 scopus 로고
    • Role of recA protein spiral filaments in genetic recombinations
    • Howard-Flanders, P., S.C. West, and A. Stasiak. 1984. Role of recA protein spiral filaments in genetic recombinations. Nature 309: 215-220.
    • (1984) Nature , vol.309 , pp. 215-220
    • Howard-Flanders, P.1    West, S.C.2    Stasiak, A.3
  • 14
    • 0344911487 scopus 로고
    • Reconstitution of homologous pairing activity dependent upon the combined activities of purified E. Coli RecA, RecBCD, and SSB proteins
    • ed. C.C. Richardson and I.R. Lehman Wiley-Liss, New York
    • Kowalczykowski, S.C. and L.J. Roman. 1990. Reconstitution of homologous pairing activity dependent upon the combined activities of purified E. coli RecA, RecBCD, and SSB proteins. In Molecular mechanisms in DNA replication and recombination, (ed. C.C. Richardson and I.R. Lehman), pp. 357-373. Wiley-Liss, New York.
    • (1990) Molecular Mechanisms in DNA Replication and Recombination , pp. 357-373
    • Kowalczykowski, S.C.1    Roman, L.J.2
  • 15
    • 0028308710 scopus 로고
    • Homologous pairing and DNA strand-exchange proteins
    • Kowalczykowski, S.C. and A.K. Eggleston. 1994. Homologous pairing and DNA strand-exchange proteins. Anna. Rev. Biochem. 63: 991-1043.
    • (1994) Anna. Rev. Biochem. , vol.63 , pp. 991-1043
    • Kowalczykowski, S.C.1    Eggleston, A.K.2
  • 16
    • 0028967415 scopus 로고
    • DNA-strand exchange promoted by RecA protein in the absence of ATP: Implications for the mechanism of energy transduction in protein-promoted nucleic acid transactions
    • Kowalczykowski, S.C. and R.A. Krupp. 1995. DNA-strand exchange promoted by RecA protein in the absence of ATP: Implications for the mechanism of energy transduction in protein-promoted nucleic acid transactions. Proc. Natl. Acad. Sci. 92: 3478-3482.
    • (1995) Proc. Natl. Acad. Sci. , vol.92 , pp. 3478-3482
    • Kowalczykowski, S.C.1    Krupp, R.A.2
  • 18
    • 0027379579 scopus 로고
    • Negative co-dominant inhibition of recA protein function. Biochemical properties of the recA1, recA13 and recA56 proteins and the effect of recA56 protein on the activities of the wild-type recA protein function in vitro
    • Lauder, S.D. and S.C. Kowalczykowski. 1993. Negative co-dominant inhibition of recA protein function. Biochemical properties of the recA1, recA13 and recA56 proteins and the effect of recA56 protein on the activities of the wild-type recA protein function in vitro. J. Mol. Biol. 234: 72-86.
    • (1993) J. Mol. Biol. , vol.234 , pp. 72-86
    • Lauder, S.D.1    Kowalczykowski, S.C.2
  • 19
    • 0018846636 scopus 로고
    • Sequencing end-labeled DNA with base-specific chemical cleavages
    • Maxam, A.M. and W. Gilbert. 1980. Sequencing end-labeled DNA with base-specific chemical cleavages. Methods Enzymol. 65: 499-560.
    • (1980) Methods Enzymol. , vol.65 , pp. 499-560
    • Maxam, A.M.1    Gilbert, W.2
  • 20
    • 0029762349 scopus 로고    scopus 로고
    • The specificity of the secondary DNA binding site of RecA protein defines its role in DNA strand exchange
    • Mazin, A.V. and S.C. Kowalczykowski. 1996. The specificity of the secondary DNA binding site of RecA protein defines its role in DNA strand exchange. Proc. Natl. Acad. Sci. 93: 10673-10678.
    • (1996) Proc. Natl. Acad. Sci. , vol.93 , pp. 10673-10678
    • Mazin, A.V.1    Kowalczykowski, S.C.2
  • 21
    • 0032481374 scopus 로고    scopus 로고
    • The function of the secondary DNA-binding site of RecA protein during DNA strand exchange
    • _. 1998. The function of the secondary DNA-binding site of RecA protein during DNA strand exchange. EMBO J. 17: 1161-1168.
    • (1998) EMBO J. , vol.17 , pp. 1161-1168
  • 22
    • 0022429092 scopus 로고
    • Interaction of recA protein with single-stranded DNA. Quantitative aspects of binding affinity modulation by nucleotide cofactors
    • Menetski, J.P. and S.C. Kowalczykowski. 1985. Interaction of recA protein with single-stranded DNA. Quantitative aspects of binding affinity modulation by nucleotide cofactors. J. Mol. Biol. 181: 281-295.
    • (1985) J. Mol. Biol. , vol.181 , pp. 281-295
    • Menetski, J.P.1    Kowalczykowski, S.C.2
  • 23
    • 0023654075 scopus 로고
    • Transfer of recA protein from one polynucleotide to another: Kinetic evidence for a ternary intermediate during the transfer reaction
    • _. 1987. Transfer of recA protein from one polynucleotide to another: Kinetic evidence for a ternary intermediate during the transfer reaction. J. Biol. Chem. 262: 2085-2092.
    • (1987) J. Biol. Chem. , vol.262 , pp. 2085-2092
  • 24
    • 0024508327 scopus 로고
    • RecA protein-promoted cleavage of LexA repressor in the presence of ADP and structural analogues of inorganic phosphate, the fluoride complexes of aluminum and beryllium
    • Moreau, P.L. and M.F. Carlier. 1989. RecA protein-promoted cleavage of LexA repressor in the presence of ADP and structural analogues of inorganic phosphate, the fluoride complexes of aluminum and beryllium. J. Biol. Chem. 264: 2302-2306.
    • (1989) J. Biol. Chem. , vol.264 , pp. 2302-2306
    • Moreau, P.L.1    Carlier, M.F.2
  • 25
    • 0025344113 scopus 로고
    • Characterization of the DNA binding activity of stable RecA-DNA complexes. Interaction between the two DNA binding sites within RecA helical filaments
    • Muller, B., T. Koller, and A. Stasiak. 1990. Characterization of the DNA binding activity of stable RecA-DNA complexes. Interaction between the two DNA binding sites within RecA helical filaments. J. Mol. Biol. 212: 97-112.
    • (1990) J. Mol. Biol. , vol.212 , pp. 97-112
    • Muller, B.1    Koller, T.2    Stasiak, A.3
  • 27
    • 0026634975 scopus 로고
    • Unwinding of heterologous DNA by RecA protein during the search for homologous sequences
    • Rould, E., K. Muniyappa, and C.M. Radding. 1992. Unwinding of heterologous DNA by RecA protein during the search for homologous sequences. J. Mol. Biol. 226: 127-139.
    • (1992) J. Mol. Biol. , vol.226 , pp. 127-139
    • Rould, E.1    Muniyappa, K.2    Radding, C.M.3
  • 28
    • 0026043556 scopus 로고
    • Indirect stimulation of recombination in Escherichia coli K-12: Dependence on recJ, uvrA, and uvrD
    • Schellhorn, H.E. and K.B. Low. 1991. Indirect stimulation of recombination in Escherichia coli K-12: Dependence on recJ, uvrA, and uvrD. J. Bacteriol 173: 6192-6198.
    • (1991) J. Bacteriol , vol.173 , pp. 6192-6198
    • Schellhorn, H.E.1    Low, K.B.2
  • 29
    • 0032079749 scopus 로고    scopus 로고
    • RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange
    • Seitz, E.M., J.P. Brockman, S.J. Sandler, A.J. Clark, and S.C. Kowalczykowski. 1998. RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange. Genes & Dev. 12: 1248-1253.
    • (1998) Genes & Dev. , vol.12 , pp. 1248-1253
    • Seitz, E.M.1    Brockman, J.P.2    Sandler, S.J.3    Clark, A.J.4    Kowalczykowski, S.C.5
  • 30
    • 0000133316 scopus 로고
    • Purified Escherichia coli recA protein catalyzes homologous pairing of superhelical DNA and single-stranded fragments
    • Shibata, T., C. DasGupta, R.P. Cunningham, and C.M. Radding. 1979. Purified Escherichia coli recA protein catalyzes homologous pairing of superhelical DNA and single-stranded fragments. Proc. Natl. Acad. Sci. 76: 1638-1642.
    • (1979) Proc. Natl. Acad. Sci. , vol.76 , pp. 1638-1642
    • Shibata, T.1    DasGupta, C.2    Cunningham, R.P.3    Radding, C.M.4
  • 31
    • 0026751113 scopus 로고
    • Rad51 protein involved in repair and recombination in S. Cerevisiae is a RecA-like protein
    • Shinohara, A., H. Ogawa, and T. Ogawa. 1992. Rad51 protein involved in repair and recombination in S. cerevisiae is a RecA-like protein. Cell 69: 457-470.
    • (1992) Cell , vol.69 , pp. 457-470
    • Shinohara, A.1    Ogawa, H.2    Ogawa, T.3
  • 32
    • 0021646247 scopus 로고
    • Visualization of recA-DNA complexes involved in consecutive stages of an in vitro strand exchange reaction
    • Stasiak, A., A.Z. Stasiak, and T. Koller. 1984. Visualization of recA-DNA complexes involved in consecutive stages of an in vitro strand exchange reaction. Cold Spring Harbor Symp. Quant. Biol. 49: 561-570.
    • (1984) Cold Spring Harbor Symp. Quant. Biol. , vol.49 , pp. 561-570
    • Stasiak, A.1    Stasiak, A.Z.2    Koller, T.3
  • 33
    • 0027978039 scopus 로고
    • Catalysis of ATP-dependent homologous DNA pairing and strand exchange by yeast RAD51 protein
    • Sung, P. 1994. Catalysis of ATP-dependent homologous DNA pairing and strand exchange by yeast RAD51 protein. Science 265: 1241-1243.
    • (1994) Science , vol.265 , pp. 1241-1243
    • Sung, P.1
  • 34
    • 0029953512 scopus 로고    scopus 로고
    • Yeast Rad51 recombinase mediates polar DNA strand exchange in the absence of ATP hydrolysis
    • Sung, P. and S.A. Stratton. 1996. Yeast Rad51 recombinase mediates polar DNA strand exchange in the absence of ATP hydrolysis. J. Biol. Chem. 271: 27983-27986.
    • (1996) J. Biol. Chem. , vol.271 , pp. 27983-27986
    • Sung, P.1    Stratton, S.A.2
  • 35
    • 0021813201 scopus 로고
    • Networks of DNA and recA protein are intermediates in homologous pairing
    • Tsang, S.S., S.A. Chow, and C.M. Radding. 1985. Networks of DNA and recA protein are intermediates in homologous pairing. Biochemistry 24: 3226-3232.
    • (1985) Biochemistry , vol.24 , pp. 3226-3232
    • Tsang, S.S.1    Chow, S.A.2    Radding, C.M.3
  • 36
    • 0029120319 scopus 로고
    • Quantitative RecA protein binding to the hybrid duplex product of DNA strand exchange
    • Ullsperger, C.J. and M.M. Cox. 1995. Quantitative RecA protein binding to the hybrid duplex product of DNA strand exchange. Biochemistry 34: 10859-10866.
    • (1995) Biochemistry , vol.34 , pp. 10859-10866
    • Ullsperger, C.J.1    Cox, M.M.2
  • 37
    • 0027363992 scopus 로고
    • Effects of a single intrastrand d(GpG) platinum adduct on the strand separating activity of the Escherichia coli proteins RecB and RecA
    • Villani, G., C. Cazaux, M.J. Pillaire, and P. Boehmer. 1993. Effects of a single intrastrand d(GpG) platinum adduct on the strand separating activity of the Escherichia coli proteins RecB and RecA. FEBS Lett. 333: 89-95.
    • (1993) FEBS Lett. , vol.333 , pp. 89-95
    • Villani, G.1    Cazaux, C.2    Pillaire, M.J.3    Boehmer, P.4
  • 38
    • 0025273606 scopus 로고
    • Image analysis reveals that Escherichia coli RecA protein consists of two domains
    • Yu, X. and E.H. Egelman. 1990. Image analysis reveals that Escherichia coli RecA protein consists of two domains. Biophys. J. 57: 555-566.
    • (1990) Biophys. J. , vol.57 , pp. 555-566
    • Yu, X.1    Egelman, E.H.2


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