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Volumn 39, Issue 2, 1999, Pages 413-419

Modeling of the interaction between new ethidium derivatives and TAR RNA of HIV-1

Author keywords

[No Author keywords available]

Indexed keywords

DRUG DERIVATIVE; ETHIDIUM; RNA BINDING PROTEIN; TRANS ACTIVATION RESPONSIVE RNA BINDING PROTEIN; TRANS-ACTIVATION RESPONSIVE RNA-BINDING PROTEIN; VIRUS RNA;

EID: 0033091309     PISSN: 00952338     EISSN: None     Source Type: Journal    
DOI: 10.1021/ci980094k     Document Type: Article
Times cited : (3)

References (21)
  • 1
    • 0026712514 scopus 로고
    • New insights into the mecanism of HIV-1 trans-activation
    • Karn, J.; Graeble, M. A. New insights into the mecanism of HIV-1 trans-activation. Trends Genet. 1992, 8, 365-368.
    • (1992) Trends Genet. , vol.8 , pp. 365-368
    • Karn, J.1    Graeble, M.A.2
  • 2
    • 0028002972 scopus 로고
    • Regulation of human immunodeficiency virus infection: Implications for pathogenesis
    • Antoni, B. A.; Stein, S. B.; Rabson, A. B. Regulation of human immunodeficiency virus infection: Implications for pathogenesis. Adv. Virus Res. 1994, 43, 53-145.
    • (1994) Adv. Virus Res. , vol.43 , pp. 53-145
    • Antoni, B.A.1    Stein, S.B.2    Rabson, A.B.3
  • 3
    • 0029852357 scopus 로고    scopus 로고
    • Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge
    • About-ela, F., Karn, J.; Varani, G. Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge. Nucleic Acids Res. 1996, 24, 3974-3981.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3974-3981
    • About-Ela, F.1    Karn, J.2    Varani, G.3
  • 4
    • 0025039326 scopus 로고
    • HIV-1 tat protein stimulates transcription by binding to a U-rich bulge in the stem of the TAR RNA structure
    • Dingwall, C.; Ernberg, I.; Gait, M. J.; Green, S. M.; Heaphy, S.; Karn, J.; Lowe, A. D.; Singh, M.; Skinner, M. A. HIV-1 tat protein stimulates transcription by binding to a U-rich bulge in the stem of the TAR RNA structure. Embo J. 1990, 9, 4125-4153.
    • (1990) Embo J. , vol.9 , pp. 4125-4153
    • Dingwall, C.1    Ernberg, I.2    Gait, M.J.3    Green, S.M.4    Heaphy, S.5    Karn, J.6    Lowe, A.D.7    Singh, M.8    Skinner, M.A.9
  • 5
    • 0029741456 scopus 로고    scopus 로고
    • The regulation of human immunodeficiency virus type-1 gene expression
    • Kingsman, S. M.; Kingsman, A. J. The regulation of human immunodeficiency virus type-1 gene expression. Eur. J. Biochem. 1996, 240, 491-507.
    • (1996) Eur. J. Biochem. , vol.240 , pp. 491-507
    • Kingsman, S.M.1    Kingsman, A.J.2
  • 6
    • 0027193751 scopus 로고
    • Human immunodficiency virus type 1 transactivator protein, tat, stimulates transcriptional real-through of distal terminator sequences in vitro
    • Graeble, M. A.; Churcher, M. J.; Lowe, A. D.; Gait, M. J.; Karn, J. Human immunodficiency virus type 1 transactivator protein, tat, stimulates transcriptional real-through of distal terminator sequences in vitro. Proc. Natl. Acad. Sci. U.S.A. 1993, 90, 6184-6188.
    • (1993) Proc. Natl. Acad. Sci. U.S.A. , vol.90 , pp. 6184-6188
    • Graeble, M.A.1    Churcher, M.J.2    Lowe, A.D.3    Gait, M.J.4    Karn, J.5
  • 7
    • 0024414213 scopus 로고
    • HIV-1 Tat protein increases transcriptional initiation and stabilizes elongation
    • Laspia, M. F.; Rice, A.; Mathews, M. B. HIV-1 Tat protein increases transcriptional initiation and stabilizes elongation. Cell 1989, 59, 283-292.
    • (1989) Cell , vol.59 , pp. 283-292
    • Laspia, M.F.1    Rice, A.2    Mathews, M.B.3
  • 8
    • 0028290825 scopus 로고
    • Control of RNA initiation and elongation at the HIV-1 promoter
    • Jones, K. A.; Peterlin, B. M. Control of RNA initiation and elongation at the HIV-1 promoter. Annu. Rev. Biochem. 1994, 63, 717-743.
    • (1994) Annu. Rev. Biochem. , vol.63 , pp. 717-743
    • Jones, K.A.1    Peterlin, B.M.2
  • 9
    • 0027260617 scopus 로고
    • In vitro and in vivo binding of human immunodeficiency virus type-1 Tat protein and Sp1 transcription factor
    • Jeang, K. T.; Chun, R.; Lin, N. H.; Gatignol, A.; Glabe, C. G.; Fan, H. In vitro and In vivo binding of human immunodeficiency virus type-1 Tat protein and Sp1 transcription factor. J. Virol. 1993, 67, 6224-6233.
    • (1993) J. Virol. , vol.67 , pp. 6224-6233
    • Jeang, K.T.1    Chun, R.2    Lin, N.H.3    Gatignol, A.4    Glabe, C.G.5    Fan, H.6
  • 10
    • 0027770008 scopus 로고
    • The protein Tat of HIV-potential target in antiretroviral chemotherapy
    • Sinet, M.; Kubar, J.; Condom, R.; Patino, N.; Guedj, R. The protein Tat of HIV-Potential target in antiretroviral chemotherapy. MS, Méd. Sci. 1993, 9, 1342-1351.
    • (1993) MS, Méd. Sci. , vol.9 , pp. 1342-1351
    • Sinet, M.1    Kubar, J.2    Condom, R.3    Patino, N.4    Guedj, R.5
  • 11
    • 0029811876 scopus 로고    scopus 로고
    • Conformational heterogeneity in two regions of Tat results in structural variations of this protein as a function of HIV-1 isolates
    • Gregoire, J. C.; Loret, E. P. Conformational heterogeneity in two regions of Tat results in structural variations of this protein as a function of HIV-1 isolates. J. Biol. Chem. 1996, 271, 22641-22646.
    • (1996) J. Biol. Chem. , vol.271 , pp. 22641-22646
    • Gregoire, J.C.1    Loret, E.P.2
  • 13
    • 0026651395 scopus 로고
    • Conformation of the TAR-RNA-arginine complex by NMR spectroscopy
    • Puglisi, J. D.; Tan, R.; Calnan, B. J.; Frankel, A. D.; Williamson, J. R. Conformation of the TAR-RNA-arginine complex by NMR spectroscopy. Science 1992, 257, 76-80.
    • (1992) Science , vol.257 , pp. 76-80
    • Puglisi, J.D.1    Tan, R.2    Calnan, B.J.3    Frankel, A.D.4    Williamson, J.R.5
  • 14
    • 0026666239 scopus 로고
    • Circular dichroism and molecular modeling yield a structure for the complex of human immunodeficiency virus type I trans-activation response RNA and the binding region of Tat, the trans-acting transcriptional activator
    • Loret, E. P.; Georgel, P.; Johnson, W. C., Jr.; Ho, P. S. Circular dichroism and molecular modeling yield a structure for the complex of human immunodeficiency virus type I trans-activation response RNA and the binding region of Tat, the trans-acting transcriptional activator. Proc. Natl. Acad. Sci. U.S.A. 1992, 89, 9734-9738.
    • (1992) Proc. Natl. Acad. Sci. U.S.A. , vol.89 , pp. 9734-9738
    • Loret, E.P.1    Georgel, P.2    Johnson W.C., Jr.3    Ho, P.S.4
  • 15
    • 0027476547 scopus 로고
    • Electrostatic interaction modulate the RNA-binding and trans-activation specificities of the HIV and SIV Tat proteins
    • Tao, J.; Frankel, A. D. Electrostatic interaction modulate the RNA-binding and trans-activation specificities of the HIV and SIV Tat proteins. Proc. Natl. Acad. Sci. U.S.A. 1993, 90, 1571-1575.
    • (1993) Proc. Natl. Acad. Sci. U.S.A. , vol.90 , pp. 1571-1575
    • Tao, J.1    Frankel, A.D.2
  • 16
    • 0028864394 scopus 로고
    • The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein
    • Aboul-ela, F.; Karn, J.; Varani, G. The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein. J. Mol. Biol. 1995, 253, 313-332.
    • (1995) J. Mol. Biol. , vol.253 , pp. 313-332
    • Aboul-Ela, F.1    Karn, J.2    Varani, G.3
  • 18
    • 0028858599 scopus 로고
    • Solution structure of a bovine immunodeficiency virus Tat-TAR peptide-RNA complex
    • Puglisi, J. D.; Chen, L.; Blanchard, S.; Frankel, A. D. Solution structure of a bovine immunodeficiency virus Tat-TAR peptide-RNA complex. Science 1995, 270, 1200-1203.
    • (1995) Science , vol.270 , pp. 1200-1203
    • Puglisi, J.D.1    Chen, L.2    Blanchard, S.3    Frankel, A.D.4
  • 19
    • 0026493730 scopus 로고
    • A molecular mechanics investigation of RNA complexes. I. Ethidium intercalation in an HIV-1 TAR RNA sequence with an unpaired adenosine
    • Yao, S.; Wilson, W. D. A molecular mechanics investigation of RNA complexes. I. Ethidium intercalation in an HIV-1 TAR RNA sequence with an unpaired adenosine. J. Biomol. Struct. Dyn. 1992, 10, 367-387.
    • (1992) J. Biomol. Struct. Dyn. , vol.10 , pp. 367-387
    • Yao, S.1    Wilson, W.D.2
  • 20
    • 0023665601 scopus 로고
    • Single base bulges in small RNA hairpins enhance binding and promote an allosteric transition
    • White, S. A.; Draper, D. E. Single base bulges in small RNA hairpins enhance binding and promote an allosteric transition. Nucleic Acid Res. 1987, 4049-4064.
    • (1987) Nucleic Acid Res. , pp. 4049-4064
    • White, S.A.1    Draper, D.E.2
  • 21
    • 0024580995 scopus 로고
    • Effects of single-base bulges on intercalator binding to small RNA and DNA hairpins and a ribosomal RNA fragment
    • White, S. A.; Draper, D. E. Effects of single-base bulges on intercalator binding to small RNA and DNA hairpins and a ribosomal RNA fragment. Biochemistry 1989, 28, 1892-1897.
    • (1989) Biochemistry , vol.28 , pp. 1892-1897
    • White, S.A.1    Draper, D.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.