-
1
-
-
0021760859
-
A fast method of comparing protein structures
-
Murthy MRN. A fast method of comparing protein structures. FEBS Lett 1984;168:151-166.
-
(1984)
FEBS Lett
, vol.168
, pp. 151-166
-
-
Murthy, M.R.N.1
-
3
-
-
0024020848
-
A simple qualitative representation of polypeptide chain folds: Comparison of protein tertiary structures
-
Abagyan RA, Maiorov VN. A simple qualitative representation of polypeptide chain folds: Comparison of protein tertiary structures. J Biomol Struct Dyn 1988;5:1267-1279.
-
(1988)
J Biomol Struct Dyn
, vol.5
, pp. 1267-1279
-
-
Abagyan, R.A.1
Maiorov, V.N.2
-
4
-
-
0023927904
-
Identification of structural motifs from protein coordinate data: Secondary structure and first-level super-secondary structure
-
Richards FM, Kundrot CE. Identification of structural motifs from protein coordinate data: Secondary structure and first-level super-secondary structure. Proteins 1988;3:71-81.
-
(1988)
Proteins
, vol.3
, pp. 71-81
-
-
Richards, F.M.1
Kundrot, C.E.2
-
5
-
-
0024557588
-
The alignment of protein structures in three dimensions
-
Zuker M, Somorjai RL. The alignment of protein structures in three dimensions. Bull Math Biol 1989;51:55-78.
-
(1989)
Bull Math Biol
, vol.51
, pp. 55-78
-
-
Zuker, M.1
Somorjai, R.L.2
-
6
-
-
0024349252
-
Protein structure alignment
-
Taylor WR, Orengo CA. Protein structure alignment. J Mol Biol 1989;208:1-22.
-
(1989)
J Mol Biol
, vol.208
, pp. 1-22
-
-
Taylor, W.R.1
Orengo, C.A.2
-
7
-
-
0025317502
-
Definition of general topological equivalence in protein structures, a procedure involving comparison of properties and relationships through simulated annealing and dynamic programming
-
Sali TL, Blundell A. Definition of general topological equivalence in protein structures, a procedure involving comparison of properties and relationships through simulated annealing and dynamic programming. J Mol Biol 1990;212:403-428.
-
(1990)
J Mol Biol
, vol.212
, pp. 403-428
-
-
Sali, T.L.1
Blundell, A.2
-
8
-
-
0025275776
-
Techniques derived from graph theory to compare secondary structure motifs in proteins
-
Mitchell EM, Artymiuk PJ, Rice DW, Willet P. Techniques derived from graph theory to compare secondary structure motifs in proteins. J Mol Biol 1990;212:151-166.
-
(1990)
J Mol Biol
, vol.212
, pp. 151-166
-
-
Mitchell, E.M.1
Artymiuk, P.J.2
Rice, D.W.3
Willet, P.4
-
9
-
-
0025744920
-
Detection of common three-dimensional substructures in proteins
-
Vriend G, Sander C. Detection of common three-dimensional substructures in proteins. Proteins 1991;11:52-58.
-
(1991)
Proteins
, vol.11
, pp. 52-58
-
-
Vriend, G.1
Sander, C.2
-
10
-
-
0026587854
-
Common spatial arrangements of backbone fragments in homologous and non-homologous proteins
-
Alexandrove NN, Takahashi K, Go N. Common spatial arrangements of backbone fragments in homologous and non-homologous proteins. J Mol Biol 1992;225:5-9.
-
(1992)
J Mol Biol
, vol.225
, pp. 5-9
-
-
Alexandrove, N.N.1
Takahashi, K.2
Go, N.3
-
11
-
-
0026686241
-
Analysis of protein sheet topologies by graph theoretical methods
-
Koch I, Kaden F, Selbig J. Analysis of protein sheet topologies by graph theoretical methods. Proteins 1992;12:314-323.
-
(1992)
Proteins
, vol.12
, pp. 314-323
-
-
Koch, I.1
Kaden, F.2
Selbig, J.3
-
12
-
-
0027511808
-
Identification of tertiary structure resemblance in proteins using a maximal common subgraph isomorphism algorithm
-
Grindley HM, Artymiuk PJ, Rice W, Willett P. Identification of tertiary structure resemblance in proteins using a maximal common subgraph isomorphism algorithm. J Mol Biol 1993;229: 707-721.
-
(1993)
J Mol Biol
, vol.229
, pp. 707-721
-
-
Grindley, H.M.1
Artymiuk, P.J.2
Rice, W.3
Willett, P.4
-
13
-
-
0027967593
-
A graph-theoretic approach to the identification of three-dimensional patterns of amino acid side-chains in protein structures
-
Artymiuk PJ, Poirrette AR, Grindley HM, Rice DW, Willet P. A graph-theoretic approach to the identification of three-dimensional patterns of amino acid side-chains in protein structures. J Mol Biol 1994;243:327-344.
-
(1994)
J Mol Biol
, vol.243
, pp. 327-344
-
-
Artymiuk, P.J.1
Poirrette, A.R.2
Grindley, H.M.3
Rice, D.W.4
Willet, P.5
-
14
-
-
0028230909
-
Three-dimensional, sequence order-independent structural comparison of a serine protease against the crystallographic database reveals active site similarities: Potential implications to evolution and to protein folding
-
Fischer D, Wolfson H, Lin SL, Nussinov R. Three-dimensional, sequence order-independent structural comparison of a serine protease against the crystallographic database reveals active site similarities: Potential implications to evolution and to protein folding. Protein Sci 1994;3:769-778.
-
(1994)
Protein Sci
, vol.3
, pp. 769-778
-
-
Fischer, D.1
Wolfson, H.2
Lin, S.L.3
Nussinov, R.4
-
15
-
-
0030602896
-
A dataset of protein-protein interfaces generated with a sequence-order-independent comparison technique
-
Tsai C-J, Lin SL, Wolfson H, Nussinov R. A dataset of protein-protein interfaces generated with a sequence-order-independent comparison technique. J Mol Biol 1996;260:604-620.
-
(1996)
J Mol Biol
, vol.260
, pp. 604-620
-
-
Tsai, C.-J.1
Lin, S.L.2
Wolfson, H.3
Nussinov, R.4
-
16
-
-
0030464952
-
Detection of non-topological motifs in protein structures
-
Alesker V, Nussinov R, Wolfson H. Detection of non-topological motifs in protein structures. Protein Eng 1996;9:1103-1119.
-
(1996)
Protein Eng
, vol.9
, pp. 1103-1119
-
-
Alesker, V.1
Nussinov, R.2
Wolfson, H.3
-
17
-
-
0025047629
-
A mutant T4 lysozyme displays five different crystal conformations
-
Faber HR, Matthews BW. A mutant T4 lysozyme displays five different crystal conformations. Nature 1990;348:263-266.
-
(1990)
Nature
, vol.348
, pp. 263-266
-
-
Faber, H.R.1
Matthews, B.W.2
-
18
-
-
0026802277
-
Structure of a hinge-bending bacteriophage T4 lysozyme mutant, Ile3Pro
-
Dixon MM, Nicholson H, Shewchuk L, Baase WA, Matthews BW. Structure of a Hinge-Bending Bacteriophage T4 Lysozyme Mutant, Ile3Pro. J Mol Biol 1992;227:917-933.
-
(1992)
J Mol Biol
, vol.227
, pp. 917-933
-
-
Dixon, M.M.1
Nicholson, H.2
Shewchuk, L.3
Baase, W.A.4
Matthews, B.W.5
-
19
-
-
0028335096
-
Structural mechanism for domain movements in proteins
-
Gerstein M, Lesk AM, Chothia C. Structural mechanism for domain movements in proteins. Biochemistry 1994;33:6739-6749.
-
(1994)
Biochemistry
, vol.33
, pp. 6739-6749
-
-
Gerstein, M.1
Lesk, A.M.2
Chothia, C.3
-
21
-
-
0025719208
-
Efficient detection of motifs in biological macromolecules by computer vision techniques
-
Nussinov R, Wolfson H. Efficient detection of motifs in biological macromolecules by computer vision techniques. Proc Natl Acad Sci USA 1991;88:10495-10499.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 10495-10499
-
-
Nussinov, R.1
Wolfson, H.2
-
22
-
-
0026301147
-
Generalizing the generalized Hough transform
-
Wolfson HJ. Generalizing the generalized Hough transform. Pattern Recog Lett 1991;12:565-573.
-
(1991)
Pattern Recog Lett
, vol.12
, pp. 565-573
-
-
Wolfson, H.J.1
-
23
-
-
0019397313
-
Generalizing the Hough transform to detect arbitrary shapes
-
Ballard DH. Generalizing the Hough transform to detect arbitrary shapes. Pattern Recognition 1981;13:111-122.
-
(1981)
Pattern Recognition
, vol.13
, pp. 111-122
-
-
Ballard, D.H.1
-
24
-
-
0024177564
-
Geometric hashing: A general and efficient model-based recognition scheme
-
Bajcy, Ullman, editors. Washington, D.C.: IEEE Computer Society Press
-
Lamdan Y, Wolfson HJ. Geometric hashing: A general and efficient model-based recognition scheme. In: Bajcy, Ullman, editors. Proceedings of the IEEE International Conference on Computer Vision. Washington, D.C.: IEEE Computer Society Press; 1988. p 238-249.
-
(1988)
Proceedings of the IEEE International Conference on Computer Vision
, pp. 238-249
-
-
Lamdan, Y.1
Wolfson, H.J.2
-
25
-
-
0017411710
-
The protein data bank: A computer-based archival file for macromolecular structures
-
Bernstein FC, Koetzle TF, Williams GJB, et al. The protein data bank: A computer-based archival file for macromolecular structures. J Mol Biol 1977;112:535-542.
-
(1977)
J Mol Biol
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.J.B.3
-
27
-
-
0032147007
-
Flexible docking allowing induced fit in proteins: Insights from an open to closed conformational isomers
-
Sandak B, Wolfson HJ, Nussinov R. Flexible docking allowing induced fit in proteins: Insights from an open to closed conformational isomers. Proteins 1998;32:159-174.
-
(1998)
Proteins
, vol.32
, pp. 159-174
-
-
Sandak, B.1
Wolfson, H.J.2
Nussinov, R.3
-
28
-
-
0030883755
-
Protein domain movements: Detection of rigid domains and visualization of hinges in comparisons of atomic coordinates
-
Wriggers W, Schulten K. Protein domain movements: Detection of rigid domains and visualization of hinges in comparisons of atomic coordinates. Proteins 1997;29:1-14.
-
(1997)
Proteins
, vol.29
, pp. 1-14
-
-
Wriggers, W.1
Schulten, K.2
-
30
-
-
0027238108
-
A computer vision based technique for 3-D sequence independent structural comparison of proteins
-
Bachar O, Fischer D, Nussinov R, Wolfson HJ. A computer vision based technique for 3-D sequence independent structural comparison of proteins. Protein Eng 1993;6:279-288.
-
(1993)
Protein Eng
, vol.6
, pp. 279-288
-
-
Bachar, O.1
Fischer, D.2
Nussinov, R.3
Wolfson, H.J.4
-
31
-
-
0026536335
-
Solution structure of a calmodulin-target peptide complex by multidimensional NMR
-
Ikura M, Clore GM, Gronenborn AM, Zhu G, Klee CB, Bax A. Solution structure of a calmodulin-target peptide complex by multidimensional NMR. Science 1992;256:632-644.
-
(1992)
Science
, vol.256
, pp. 632-644
-
-
Ikura, M.1
Clore, G.M.2
Gronenborn, A.M.3
Zhu, G.4
Klee, C.B.5
Bax, A.6
|