-
1
-
-
0026587854
-
Common spatial arrangements of back-bone fragments in homologous and non-homologous proteins
-
Alexandrov, N. N., Takahashi, K. & Go, N. (1992). Common spatial arrangements of back-bone fragments in homologous and non-homologous proteins. J. Mol. Biol. 225, 5-9.
-
(1992)
J. Mol. Biol.
, vol.225
, pp. 5-9
-
-
Alexandrov, N.N.1
Takahashi, K.2
Go, N.3
-
2
-
-
0024046505
-
An investigation of protein subunit and domain interfaces
-
Argos, P. (1988). An investigation of protein subunit and domain interfaces. Protein Eng. 2, 101-113.
-
(1988)
Protein Eng.
, vol.2
, pp. 101-113
-
-
Argos, P.1
-
3
-
-
0027238108
-
A computer vision based technique for 3-D sequence independent structural comparison of proteins
-
Bachar, O., Fischer, D., Nussinov, R. & Wolfson. H. (1993). A computer vision based technique for 3-D sequence independent structural comparison of proteins. Protein Eng. 6, 279-288.
-
(1993)
Protein Eng.
, vol.6
, pp. 279-288
-
-
Bachar, O.1
Fischer, D.2
Nussinov, R.3
Wolfson, H.4
-
4
-
-
0017411710
-
The Protein Databank: A computer-based archival file for macromolecular structures
-
Bernstein, F. C., Koetzle, T. F., Williams, G. J. B., Meyer, E. F., Jr, Brice, M. D., Rodgers, J. R., Kennard O., Shimanouchi, T. & Tasumi, M. (1977). The Protein Databank: A computer-based archival file for macromolecular structures. J. Mol. Biol. 112, 535-542.
-
(1977)
J. Mol. Biol.
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.J.B.3
Meyer E.F., Jr.4
Brice, M.D.5
Rodgers, J.R.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
5
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimization and dynamics calculations
-
Brooks, B. R., Bruccoleri, R. E., Olafson, B. D., States, D. J., Swaminathan S. & Karplus M. (1983). CHARMM: a program for macromolecular energy, minimization and dynamics calculations. J. Comp. Chem. 4, 187-217.
-
(1983)
J. Comp. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
6
-
-
0028124665
-
High-resolution structure of the oligomerization domain of p53 by multidimensional NMR
-
Clore, G. M., Omichinski, J. G., Sakaguchi, K., Zambrano, N., Sakamoto, H., Appella, E. & Gronenborn, A. M. (1994). High-resolution structure of the oligomerization domain of p53 by multidimensional NMR. Science, 265, 386-391.
-
(1994)
Science
, vol.265
, pp. 386-391
-
-
Clore, G.M.1
Omichinski, J.G.2
Sakaguchi, K.3
Zambrano, N.4
Sakamoto, H.5
Appella, E.6
Gronenborn, A.M.7
-
7
-
-
0028582135
-
Analysis of hydrophobicity in the α and β chemokine families and its relevance to dimerization
-
Covell, D. G., Smythers, G. W., Gronenborn, A. M. & Clore, G. M. (1995). Analysis of hydrophobicity in the α and β chemokine families and its relevance to dimerization. Protein Sci. 3, 2064-2072.
-
(1995)
Protein Sci.
, vol.3
, pp. 2064-2072
-
-
Covell, D.G.1
Smythers, G.W.2
Gronenborn, A.M.3
Clore, G.M.4
-
8
-
-
0026802451
-
Crystal structure of a streptococcal protein G domain bound to a Fab fragment
-
Derrick, J. P. & Wigley, D. B. (1992). Crystal structure of a streptococcal protein G domain bound to a Fab fragment. Nature, 359, 752-754.
-
(1992)
Nature
, vol.359
, pp. 752-754
-
-
Derrick, J.P.1
Wigley, D.B.2
-
9
-
-
0027983037
-
Convergent evolution: The need to be explicit
-
Doolittle, R. F. (1994). Convergent evolution: the need to be explicit. Trends Biochem. Sci. 19, 15-18.
-
(1994)
Trends Biochem. Sci.
, vol.19
, pp. 15-18
-
-
Doolittle, R.F.1
-
10
-
-
0028230909
-
3-D, sequence-order independent structural comparison of trypsin against the crystallographic database reveals active site similarities to subtilisin-like and sulfhydryl proteases: Potential implications
-
Fischer, D., Wolfson, H., Lin, S. L. & Nussinov, R. (1994). 3-D, sequence-order independent structural comparison of trypsin against the crystallographic database reveals active site similarities to subtilisin-like and sulfhydryl proteases: potential implications. Protein Sci. 3, 769-778.
-
(1994)
Protein Sci.
, vol.3
, pp. 769-778
-
-
Fischer, D.1
Wolfson, H.2
Lin, S.L.3
Nussinov, R.4
-
11
-
-
0029564871
-
A 3-D sequence-independent representation of the protein data bank
-
Fischer, D., Tsai, C. J., Nussinov, R. & Wolfson, H. (1995). A 3-D sequence-independent representation of the protein data bank. Protein Eng. 8, 981-997.
-
(1995)
Protein Eng.
, vol.8
, pp. 981-997
-
-
Fischer, D.1
Tsai, C.J.2
Nussinov, R.3
Wolfson, H.4
-
12
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
Holm, L. & Sander, C. (1993). Protein structure comparison by alignment of distance matrices. J. Mol. Biol. 233, 123-138.
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
14
-
-
0028773905
-
The molecular structure of the complex of Ascaris chymotrypsin/ elastase inhibitor with porcine elastase
-
Huang, K., Strynadka, N. C. J., Bernard, V. D., Peanasky, R. J. & James, M. N. G. (1994). The molecular structure of the complex of Ascaris chymotrypsin/ elastase inhibitor with porcine elastase. Structure, 2, 679-689.
-
(1994)
Structure
, vol.2
, pp. 679-689
-
-
Huang, K.1
Strynadka, N.C.J.2
Bernard, V.D.3
Peanasky, R.J.4
James, M.N.G.5
-
15
-
-
0025123333
-
The structure of protein-protein recognition sites
-
Janin, J. & Chothia, C. (1990). The structure of protein-protein recognition sites. J. Biol. Chem. 265, 16027-16030.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 16027-16030
-
-
Janin, J.1
Chothia, C.2
-
16
-
-
0024246956
-
Surface, subunit interfaces and interior of oligomeric proteins
-
Janin, J., Miller, S. & Chothia, C. (1988). Surface, subunit interfaces and interior of oligomeric proteins. J. Mol. Biol. 204, 155-164.
-
(1988)
J. Mol. Biol.
, vol.204
, pp. 155-164
-
-
Janin, J.1
Miller, S.2
Chothia, C.3
-
17
-
-
0028318094
-
Factors influencing the ability of knowledge-based potentials to identify native sequence-structure motifs
-
Kocher, J.-P. A., Rooman, M. J. & Wodak, S. J. (1994). Factors influencing the ability of knowledge-based potentials to identify native sequence-structure motifs. J. Mol. Biol. 235, 1598-1613.
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 1598-1613
-
-
Kocher, J.-P.A.1
Rooman, M.J.2
Wodak, S.J.3
-
18
-
-
0012083240
-
A study of four-helix bundles: Investigating protein folding via similar architechtural motifs in protein cores and in subunit interfaces
-
Lin, S. L., Tsai, C.-J. & Nussinov, R. (1995). A study of four-helix bundles: Investigating protein folding via similar architechtural motifs in protein cores and in subunit interfaces. J. Mol. Biol. 112, 535-542.
-
(1995)
J. Mol. Biol.
, vol.112
, pp. 535-542
-
-
Lin, S.L.1
Tsai, C.-J.2
Nussinov, R.3
-
19
-
-
0028324332
-
High-resolution solution structure of the β chemokine hMIP-1β by multi-dimensional NMR
-
Lodi, P. J., Garrett, D. S., Kuszewski, J., Tsang, M. L.-S., Weatherbee, J. A., Leonard, W. J., Gronenborn A. M. & Clore G. M. (1994). High-resolution solution structure of the β chemokine hMIP-1β by multi-dimensional NMR. Science, 263, 1762-1767.
-
(1994)
Science
, vol.263
, pp. 1762-1767
-
-
Lodi, P.J.1
Garrett, D.S.2
Kuszewski, J.3
Tsang, M.L.-S.4
Weatherbee, J.A.5
Leonard, W.J.6
Gronenborn, A.M.7
Clore, G.M.8
-
20
-
-
0027155448
-
A novel dimer configuration revealed by the crystal structure at 2.4 Å resolution of human interleukin-5
-
Milburn, M. V., Hassell, A. M., Lambert, M. H., Jordan, S. R., Proudfoot, A. E. I., Graber, P. & Wells, T. N. C. (1993). A novel dimer configuration revealed by the crystal structure at 2.4 Å resolution of human interleukin-5. Nature, 363, 172-176.
-
(1993)
Nature
, vol.363
, pp. 172-176
-
-
Milburn, M.V.1
Hassell, A.M.2
Lambert, M.H.3
Jordan, S.R.4
Proudfoot, A.E.I.5
Graber, P.6
Wells, T.N.C.7
-
21
-
-
0025719208
-
Efficient detection of three-dimensional structural motifs in biological macromolecules by computer vision techniques
-
Nussinov, R. & Wolfson, H. J. (1991). Efficient detection of three-dimensional structural motifs in biological macromolecules by computer vision techniques. Proc. Natl Acad. Sci. USA, 88, 10495-10499.
-
(1991)
Proc. Natl Acad. Sci. USA
, vol.88
, pp. 10495-10499
-
-
Nussinov, R.1
Wolfson, H.J.2
-
22
-
-
0027220647
-
Identifying and classifying protein fold families
-
Orengo, C. A., Flores, T. P., Taylor, W. R. & Thornton, J. M. (1993). Identifying and classifying protein fold families. Protein Eng. 6, 485-500.
-
(1993)
Protein Eng.
, vol.6
, pp. 485-500
-
-
Orengo, C.A.1
Flores, T.P.2
Taylor, W.R.3
Thornton, J.M.4
-
23
-
-
0028914722
-
Structural basis of substrate specificity in the serine proteases
-
Perona, J. J. & Craik, C. S. (1995). Structural basis of substrate specificity in the serine proteases. Protein Sci. 4, 337-360.
-
(1995)
Protein Sci.
, vol.4
, pp. 337-360
-
-
Perona, J.J.1
Craik, C.S.2
-
24
-
-
0029119320
-
A preference-based free-energy parameterization of enzyme-inhibitor binding. Applications to HIV-1-protease inhibitor design
-
Wallqvist, A., Jernigan, R. L. & Covell, D. G. (1995). A preference-based free-energy parameterization of enzyme-inhibitor binding. Applications to HIV-1-protease inhibitor design. Protein Sci. 9, 1881-1903.
-
(1995)
Protein Sci.
, vol.9
, pp. 1881-1903
-
-
Wallqvist, A.1
Jernigan, R.L.2
Covell, D.G.3
-
25
-
-
0026464639
-
New algorithm to model protein-protein recognition based on surface complementarity; Application to antibody-antigen docking
-
Walls, P. H. & Sternberg, M. J. E. (1992). New algorithm to model protein-protein recognition based on surface complementarity; Application to antibody-antigen docking. J. Mol. Biol. 228, 277-297.
-
(1992)
J. Mol. Biol.
, vol.228
, pp. 277-297
-
-
Walls, P.H.1
Sternberg, M.J.E.2
-
26
-
-
0028332007
-
A role for surface hydrophobicity in protein-protein recognition
-
Young, L., Jernigan, R. L. & Covell, D. G. (1994). A role for surface hydrophobicity in protein-protein recognition. Protein Sci. 3, 717-729.
-
(1994)
Protein Sci.
, vol.3
, pp. 717-729
-
-
Young, L.1
Jernigan, R.L.2
Covell, D.G.3
|