The cytochrome bc1 complex from Rhodovulum sulfidophilum is a dimer with six quinones per monomer and an additional 6-kDa component

European Journal of Biochemistry

Volumn 259, Issue 3, 1999, Pages 709-718

  Montoya, Guillermo ^a   Kaat, Kai Te ^a   Rodgers, Simon ^a   Nitschke, Wolfgang ^b   Sinning, Irmgard ^a  

^a EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

^b CNRS and Aix Marseille University   (France)

Author keywords

[No Author keywords available]

Indexed keywords

QUINONE DERIVATIVE; UBIQUINOL CYTOCHROME C REDUCTASE; BACTERIAL PROTEIN; DETERGENT; IRON SULFUR PROTEIN; LIPID; RIESKE IRON-SULFUR PROTEIN;

ARTICLE; BINDING SITE; COMPLEX FORMATION; ENZYME PURIFICATION; ENZYME SUBSTRATE; ENZYME SYNTHESIS; INHIBITION KINETICS; LIPID ANALYSIS; MASS SPECTROMETRY; NONHUMAN; OXIDATION REDUCTION REACTION; PHOTOTROPHIC BACTERIUM; PRIORITY JOURNAL; RHODOVULUM SULFIDOPHILUM; AMINO ACID SEQUENCE; CHEMISTRY; DIMERIZATION; DRUG ANTAGONISM; ELECTROCHEMISTRY; ELECTRON SPIN RESONANCE; ENZYME STABILITY; ENZYMOLOGY; MOLECULAR GENETICS; PROTEIN BINDING; PROTEIN CONFORMATION; RHODOBACTER; ULTRAVIOLET SPECTROPHOTOMETRY;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; DETERGENTS; DIMERIZATION; ELECTROCHEMISTRY; ELECTRON SPIN RESONANCE SPECTROSCOPY; ELECTRON TRANSPORT COMPLEX III; ENZYME STABILITY; IRON-SULFUR PROTEINS; LIPIDS; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; PROTEIN CONFORMATION; QUINONES; RHODOBACTER; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; SPECTROPHOTOMETRY, ULTRAVIOLET;

EID: 0033068165     PISSN: 00142956     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1432-1327.1999.00094.x     Document Type: Article

References (64)

1. 6f complexes. In Origin and Evolution of Biological Energy Conversion (Baltscheffsky, H., ed.), pp. 221-253. VCH Publishers Inc, New York.
2. 2. Schütz, M., Xie, D.L., Nelson, N. & Hauska, G. (1994) Transcription units for the Rieske iron-sulfur protein and cytochrome b in Chlorobium limicola. Photosynth. Res. 39, 163-174.
3. 3. Schäfer, G. (1996) Bioenergetics of the archaebacterium Sulfolobus. Biochim. Biophys. Acta 1277, 163-200.
4. 1 of quinol-cytochrome c reductase. J. Biol. Chem. 271, 12457-12462.
5. 5. Nitschke, W., Kramer, D.M., Riedel, A. & Liebl, U. (1995) From naptho-to benzo-quinones (r)evolutionary reorganizations of electron transfer chains. In Photosynthesis. From Light to Biosphere (Mathis, P., ed.), Vol. I, pp. 945-950. Kluwer Academic Publishers, Dordrecht, the Netherlands.
6. 2) cytochrome c reductase. J. Biol. Chem. 237, 1681-1685.
7. 1 subcomplex and the 'Rieske' iron-sulfur protein isolated by a new method. Eur. J. Biochem. 132, 395-407.
8. 8. Siedow, J.N., de Power, S., la Rosa, F.F. & Palmer, G. (1978) The preparation and characterization of highly purified, enzymically active complex III from baker's yeast. J. Biol. Chem. 253, 2392-2399.
9. 2 oxidoreductase activity from Rhodopseudomonas sphaeroides GA. Eur. J. Biochem. 126, 105-111.
10. 1 and b type cytochrome 2 with heme centres in the photosynthetic membranes from Rps. palustris. Biochim. Biophys. Acta 852, 198-202.
11. 11. Yu, L. & Yu, C.A. (1982) Isolation and properties of the cytochrome bel complex from Rhodopseudomonas sphaeroides. Biochem. Biophys. Res. Commun. 108, 1285-1292.
12. 1 complex from Rps. viridis. In Techniques and New Developments in Photosynthesis Research (Barber, J. & Malkin, J., eds), pp. 287-289. Plenum Press, New York.
13. 1 complexes of photosynthetic bacteria. Photosynth. Res. 35, 117-133.
14. 14. Yang, X.H. & Trumpower, B.L. (1986) Purification of a three-subunit ubiquinol-cytochrome c oxidoreductase complex from Paracoccus. J. Biol Chem. 261, 12282-12289.
15. 15. Esposti, M.D., De Vries, S., Crimi, M., Ghelli, A., Patarnello, T. & Meyer, A. (1993) Mitochondrial cytochrome b: evolution and structure of the protein. Biochim. Biophys. Acta 1143, 243-271.
16. 1 complex from bovine heart mitochondria. Science 277, 60-66.
17. 1. Nature 392, 677-684.
18. 1 complex. Science 281, 64-71.
19. 19. Martinez, S.E., Huang, D., Ponomarev, M., Cramer, W.A. & Smith, J.L. (1996) The heme redox center of chloroplast cytochrome f is linked to a buried five-water chain. Protein Sci. 5, 1081-1092.
20. 1 complexes from Rhodobacter capsulatus. Biochemistry 35, 12812-12819.
21. 1 complexes of mitochondrial and photosynthetic membranes. A near-infrared magnetic circular dichroism and electron paramagnetic resonance study. Biochim. Biophys. Acta 1274, 9-20.
22. 1 subunits. Biochemistry 32, 628-636.
23. 1 complex determined by MAD phasing at 1.5 A resolution. Structure 4, 567-579.
24. 1 complex from bovine heart. Proc. Natl Acad. Sci. USA 95, 8026-8033.
25. 25. Reference withdrawn.
26. 1 complex: isolation of active monomers. Arch. Biochem. Biophys. 236, 619-628.
27. 1 isolated from bovine heart. Biochemistry 33, 13005-13012.
28. 28. Montoya, G., Cyrklaff, M. & Sinning, I. (1995) Two-dimensional crystallization and preliminary structure analysis of light harvesting II (B800-850) complex from the purple bacterium Rhodovulum sulfidophilum. J. Mol Biol. 250, 1-10.
29. 1 complex from Rhodobacter sphaeroides. Biochemistry 29, 2645-2651.
30. 30. Doi, M., Shioi, Y., Gadon, N., Golecki, J. & Drews, G. (1991) Spectroscopic studies on the light-harvesting pigment-protein complexII from dark-aerobic and light-aerobic grown cells of Rhodobacter sulfidophilus. Biochim. Biophys. Acta 1058, 235-241.
31. 31. Markwell, M.A., Haas, S.M., Tolbert, N.E. & Bieber, L.L. (1981) Protein determination in membrane and lipoprotein samples: manual and automated procedures. Methods Enzymol, 72, 296-303.
32. 32. Christie, W.W. (1982) Lipid Analysis. Pergamon Press, Oxford.
33. 33. Cartwright, I.J. (1993) Separation and analysis of phospholipids by thin-layer chromatography. In Biomembrane Protocols: I. Isolation and Analysis. Methods in Molecular Biology (Graham, J.M. & Higgins, J.A., eds), Vol. 19, pp. 153-167. Humana Press, Totowa, NJ.
34. 34. Gast, P., Michalski, T.J., Hunt, J.E. & Norris, J.R. (1985) Determination of the amount and the type of quinones present in single crystals from reaction center protein from the photosynthetic bacterium Rhodopseudomonas viridis, FEBS Letters 179, 325-329.
35. 35. Andersson, S. (1992) Determination of coenzyme Q by non-aqueous reversed-phase liquid chromatography. J. Chrom. 606, 272-276.
36. 36. Dutton, P.L. (1971) Oxidation-reduction potential dependence of the interaction of cytochromes, bacteriochlorophyll and carotenoids at 77 K in chromatophores of Chromatium D and Rhodopseudomonas gelatinosa. Biochim. Biophys. Acta 226, 63-80.
37. 1 complexes from phylogenetically diverse species by a single chromatographic procedure. Biochim. Biophys. Acta 891, 227-241.
38. 2 oxidoreductase from Rhodobacter capsulatus: definition of a minimal, functional isolated preparation. Biochemistry 32, 1310-1317.
39. 1 by reverse-phase HPLC and determination of the subunit molecular masses by electrospray ionization mass spectrometry. Biochemistry 33, 10561-10567.
40. 40. Genetics Computer Group, Aug. (1994) Program Manual for the Wisconsin Package, 575 Science Drive, Madison, WI, USA.
41. 41. Linke, P., Bechmann, G., Gothe, A. & Weiss, H. (1986) Dimeric ubiquinol: cytochrome c reductase of Neurospora mitochondria contains one cooperative ubiquinone-reduction centre. Eur. J. Biochem. 158, 615-621.
42. 6f complex as a structural and functional dimer. Biochemistry 33, 4401-4409.
43. 6f complex at 8 Å resolution. J. Biol. Chem. 272, 20263-20268.
44. 6f complex: causes and consequences. J. Biol. Chem. 272, 21892-21900.
45. 45. Brandt, U. & Trumpower, B. (1994) The protonmotive Q cycle in mitochondria and bacteria. Crit. Rev. Biochem. Mol. Biol. 29, 165-197.
46. 46. Yu, C.A. & Yu, L. (1993) Mitochondrial ubiquinol-cytochromc c reduclase complex: crystallization and protein: ubiquinone interaction. J. Bioenerg. Biomembr. 25, 259-273.
47. 1 complex. Eur. J. Biochem. 197, 555-561.
48. 1 complex by blocking a protonatable group. J. Biol. Chem. 270, 25001-25006.
49. 1 complex of a photosynthetic bacterium Rhodobacter sphaeroides R-26. Biochemistry 26, 3658-3664.
50. 1 complex from Rhodobacter sphaeroides. Biochemistry 33, 10207-10214.
51. 1 complex. Eur. J. Biochem. 190, 123-130.
52. 1 complex in mammals and retained as a subunit in the complex. J. Biol. Chem. 268, 8387-8390.
53. 53. Witt, H. & Ludwig, B. (1997) Isolation, analysis, and deletion of the gene coding for subunit IV of cytochrome c oxidase in Paracoccus denitrificans. J. Biol. Chem. 272, 5514-5517.
54. 54. Iwata, S., Ostermeier, C., Ludwig, B. & Michel, H. (1995) Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans. Nature 376, 660-669.
55. 6f complex. In The Molecular Biology of Cyanobacteria (Bryant, D., ed.), pp. 259-317. Kluwer Academic Publishers, Dordrecht, the Netherlands.
56. 56. Migita, C.T., Migita, K. & Iwaizumi, M. (1983) Electron paramagnetic resonance studies of highly anisotropic low-spin states of ferrimyo-globin derivatives. Biochim. Biophys. Acta 743, 290-298.
57. 57. Salerno, J.C. (1984) Cytochrome electron spin resonance line shapes, ligand fields, and components stoichiometry in ubiquinol-cytochrome c oxidoreductase. J. Biol. Chem. 259, 2331-2336.
58. 58. de Vries, S., Albracht, S.P. & Leeuwerik, F.J. (1979) The multiplicity and stoichiometry of the prosthetic groups in QH2: cytochrome c oxidoreductase as studied by EPR. Biochim. Biophys. Acta 546, 316-333.
59. 59. Matsuura, K., Bowyer, J.R., Ohnishi, T. & Dutton, P.L. (1983) Inhibition of electron transfer by 3-alkyl-2-hydroxy-I,4-naphthoqui-nones in the ubiquinol-cytochrome c oxidoreductases of Rhodopseudomonas sphaeroides and mammalian mitochondria. Interaction with a ubiquinone-binding site and the Rieske iron-sulfur cluster. J. Biol. Chem. 258, 1571-1579.
60. 60. Liebl, U., Pezennec, S., Riedel, A., Kellner, E. & Nitschke, W. (1992) The Rieske FeS center from the Gram-positive bacterium PS3 and its interaction with the menaquinone pool studied by EPR. J. Biol. Chem. 267, 14068-14072.
61. 1 complex from potato tuber mitochondria. J. Biol. Chem. 266, 9064-9077.
62. 2+-ATPase/lipid interaction. Biochemistry 28, 2558-2567.
63. 63. Bechmann, G., Weiss, H. & Rich, P.R. (1992) Non-linear inhibition curves for tight-binding inhibitors of dimeric ubiquinol-cytochrome c oxidoreductases. Evidence for rapid inhibitor mobility. Eur. J. Biochem. 208, 315-325.
64. 1 complex in Saccharomyces cerevisiae. J. Biol. Chem. 265, 17005-17011.