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Volumn 7, Issue 4, 1999, Pages 478-486

A comparison of genomic structures and expression patterns of two closely related flanking genes in a critical lung cancer region at 3p21.3

Author keywords

3p21 genes; Altercative splicing; DNA RNA binding proteins; Lung cancer; Tumour suppressor

Indexed keywords

AMINO ACID; ZINC FINGER PROTEIN;

EID: 0033050855     PISSN: 10184813     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.ejhg.5200334     Document Type: Article
Times cited : (47)

References (29)
  • 1
    • 0031004936 scopus 로고    scopus 로고
    • Deletions of the short arm of chromosome 3 in solid tumors and the search for suppressor genes
    • Kok K, Naylor SL, Buys CHCM: Deletions of the short arm of chromosome 3 in solid tumors and the search for suppressor genes. Adv Cancer Res 1997; 71: 27-92.
    • (1997) Adv Cancer Res , vol.71 , pp. 27-92
    • Kok, K.1    Naylor, S.L.2    Buys, C.H.C.M.3
  • 2
    • 0027981277 scopus 로고
    • A homozygous deletion in a small cell lung cancer cell line involving a 3p21 region with a marked instability in yeast artificial chromosomes
    • Kok K, Van den Berg A, Veldhuis PMJF et al. A homozygous deletion in a small cell lung cancer cell line involving a 3p21 region with a marked instability in yeast artificial chromosomes. Cancer Res 1994; 54: 4183-4187.
    • (1994) Cancer Res , vol.54 , pp. 4183-4187
    • Kok, K.1    Van Den Berg, A.2    Veldhuis, P.M.J.F.3
  • 3
    • 0027185801 scopus 로고
    • A homozygous deletion on chromosome 3 in a small cell lung cancer cell line correlates with a region of tumour suppressor activity
    • Daly MC, Xiang RH, Buchhagen D et al: A homozygous deletion on chromosome 3 in a small cell lung cancer cell line correlates with a region of tumour suppressor activity. Oncogene 1993; 8: 1721-1729.
    • (1993) Oncogene , vol.8 , pp. 1721-1729
    • Daly, M.C.1    Xiang, R.H.2    Buchhagen, D.3
  • 4
    • 9244251007 scopus 로고    scopus 로고
    • Distinct 3p21.3 deletions in lung cancer and identification of a new human semaphorin
    • Roche J, Boldog F, Robinson M et al: Distinct 3p21.3 deletions in lung cancer and identification of a new human semaphorin. Oncogene 1996; 12: 1289-1297.
    • (1996) Oncogene , vol.12 , pp. 1289-1297
    • Roche, J.1    Boldog, F.2    Robinson, M.3
  • 6
    • 0027864024 scopus 로고
    • A PCR-aided transcript titration assay revealing very low expression of a gene at band 3p21 in 33 cell lines derived from all types of lung cancer
    • Kok K, Van den berg A, Buchhagen DL, Carritt B, Buys CHCM: A PCR-aided transcript titration assay revealing very low expression of a gene at band 3p21 in 33 cell lines derived from all types of lung cancer. Eur J Hum Genet 1993; 1: 156-163.
    • (1993) Eur J Hum Genet , vol.1 , pp. 156-163
    • Kok, K.1    Van Den Berg, A.2    Buchhagen, D.L.3    Carritt, B.4    Buys, C.H.C.M.5
  • 7
    • 0025016822 scopus 로고
    • Systematic screening of yeast artificial-chromosome libraries by use of the polymerase chain reaction
    • Green ED, Olson MV: Systematic screening of yeast artificial-chromosome libraries by use of the polymerase chain reaction. Proc Natl Acad Sci USA 1990; 87: 1213-1217.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 1213-1217
    • Green, E.D.1    Olson, M.V.2
  • 8
    • 0021153574 scopus 로고
    • Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis
    • Schwartz DC, Cantor CR: Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis. Cell 1984; 37: 67-75.
    • (1984) Cell , vol.37 , pp. 67-75
    • Schwartz, D.C.1    Cantor, C.R.2
  • 9
    • 0029037112 scopus 로고
    • A provisional transcript map of the spinal muscular atrophy (SMA) critical region
    • Van der Steege G, Draaijers TG, Grootscholten PM et al: A provisional transcript map of the spinal muscular atrophy (SMA) critical region. Eur J Hum Genet 1995; 3: 87-95.
    • (1995) Eur J Hum Genet , vol.3 , pp. 87-95
    • Van Der Steege, G.1    Draaijers, T.G.2    Grootscholten, P.M.3
  • 10
    • 0029023051 scopus 로고
    • A single residue in DNA polymerases of the Escherichia coli DNA polymerase I family is critical for distinguishing between deoxy-and dideoxyribonucleotides
    • Tabor S, Richardson CC: A single residue in DNA polymerases of the Escherichia coli DNA polymerase I family is critical for distinguishing between deoxy-and dideoxyribonucleotides. Proc Natl Acad Sci USA 1995; 92: 6339-6343.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 6339-6343
    • Tabor, S.1    Richardson, C.C.2
  • 11
    • 0039001059 scopus 로고
    • Improved double-stranded DNA sequencing using the linear polymerase chain reaction
    • Murray V: Improved double-stranded DNA sequencing using the linear polymerase chain reaction. Nucleic Acids Res 1989; 17: 8889.
    • (1989) Nucleic Acids Res , vol.17 , pp. 8889
    • Murray, V.1
  • 12
    • 0025269042 scopus 로고
    • A simplified protocol for fast plasmid DNA sequencing
    • Zimmermann J, Voss V, Schwager C et al: A simplified protocol for fast plasmid DNA sequencing. Nucleic Acids Res 1990; 18: 1067.
    • (1990) Nucleic Acids Res , vol.18 , pp. 1067
    • Zimmermann, J.1    Voss, V.2    Schwager, C.3
  • 13
    • 0025339588 scopus 로고
    • A novel, rapid method for the isolation of terminal sequences from yeast artificial chromosome (YAC) clones
    • Riley J, Butler R, Ogilvie D et al: A novel, rapid method for the isolation of terminal sequences from yeast artificial chromosome (YAC) clones. Nucleic Acids Res 1990; 18: 2887-2890.
    • (1990) Nucleic Acids Res , vol.18 , pp. 2887-2890
    • Riley, J.1    Butler, R.2    Ogilvie, D.3
  • 14
    • 0026531915 scopus 로고
    • A gene from human chromosome region 3p21 with reduced expression in small cell lung cancer
    • Carritt B, Kok K, Van den Berg A et al: A gene from human chromosome region 3p21 with reduced expression in small cell lung cancer. Cancer Res 1992; 52: 1536-1541.
    • (1992) Cancer Res , vol.52 , pp. 1536-1541
    • Carritt, B.1    Kok, K.2    Van Den Berg, A.3
  • 15
    • 0021760026 scopus 로고
    • Computer methods to locate signals in nucleic acid sequences
    • Staden R: Computer methods to locate signals in nucleic acid sequences. Nucleic Acids Res 1984; 12: 505-519.
    • (1984) Nucleic Acids Res , vol.12 , pp. 505-519
    • Staden, R.1
  • 16
    • 0029978835 scopus 로고    scopus 로고
    • Construction of a 600-kilobase cosmid clone contig and generation of a transcriptional map surrounding the lung cancer tumor suppressor gene (TSG) locus on human chromosome 3p21.3: Progress toward the isolation of a lung cancer TSG
    • Wei MH, Latif F, Bader S et al: Construction of a 600-kilobase cosmid clone contig and generation of a transcriptional map surrounding the lung cancer tumor suppressor gene (TSG) locus on human chromosome 3p21.3: Progress toward the isolation of a lung cancer TSG. Cancer Res 1996; 56: 1487-1492.
    • (1996) Cancer Res , vol.56 , pp. 1487-1492
    • Wei, M.H.1    Latif, F.2    Bader, S.3
  • 17
    • 0030046844 scopus 로고    scopus 로고
    • A novel gene, DXS8237E, lies within 20kb upstream of UBE1 in Xp11.23 and has a different X inactivation status
    • Coleman MP, Ambrose HJ, Carrel L, Németh AH, Willard HF, Davies KE: A novel gene, DXS8237E, lies within 20kb upstream of UBE1 in Xp11.23 and has a different X inactivation status. Genomics 1996; 31: 135-138.
    • (1996) Genomics , vol.31 , pp. 135-138
    • Coleman, M.P.1    Ambrose, H.J.2    Carrel, L.3    Németh, A.H.4    Willard, H.F.5    Davies, K.E.6
  • 18
    • 0030608273 scopus 로고    scopus 로고
    • Prediction of the coding sequences of unidentified human genes. VI. the coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain
    • Nagase T, Seki N, Ishikawa K et al: Prediction of the coding sequences of unidentified human genes. VI. The coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain. DNA Res 1996; 3: 321-329.
    • (1996) DNA Res , vol.3 , pp. 321-329
    • Nagase, T.1    Seki, N.2    Ishikawa, K.3
  • 20
    • 2642712493 scopus 로고    scopus 로고
    • Human lung cancer antigens recognised by autologous antibodies: Definition of a novel cDNa derived from the tumour suppressor gene locus on chromosome 3p21.3
    • Güre AO, Altorki NK, Stockert E, Scanlan MJ, Old LJ, Chen YT: Human lung cancer antigens recognised by autologous antibodies: definition of a novel cDNA derived from the tumour suppressor gene locus on chromosome 3p21.3. Cancer Res 1998; 58: 1034-1041.
    • (1998) Cancer Res , vol.58 , pp. 1034-1041
    • Güre, A.O.1    Altorki, N.K.2    Stockert, E.3    Scanlan, M.J.4    Old, L.J.5    Chen, Y.T.6
  • 21
    • 0028990057 scopus 로고
    • The RNP domain: A sequence-specific RNA-binding domain involved in processing and transport of RNA
    • Nagai K, Oubridge C, Ito N, Avis J, Evans P: The RNP domain: a sequence-specific RNA-binding domain involved in processing and transport of RNA. Trends Biochem Sci 1995; 20: 235-240.
    • (1995) Trends Biochem Sci , vol.20 , pp. 235-240
    • Nagai, K.1    Oubridge, C.2    Ito, N.3    Avis, J.4    Evans, P.5
  • 22
    • 0026078249 scopus 로고
    • Two interdependent basic domains in nucleoplasmin nuclear targeting sequence: Identification of a class of bipartite nuclear targeting sequence
    • Robbins J, Dilworth SM, Laskey RA, Dingwall C: Two interdependent basic domains in nucleoplasmin nuclear targeting sequence: identification of a class of bipartite nuclear targeting sequence. Cell 1991; 64: 615-623.
    • (1991) Cell , vol.64 , pp. 615-623
    • Robbins, J.1    Dilworth, S.M.2    Laskey, R.A.3    Dingwall, C.4
  • 23
    • 0030013633 scopus 로고    scopus 로고
    • A major tyrosine-phosphorylated protein of Trypanosoma brucei is a nucleolar RNA-binding protein
    • Das A, Peterson GC, Kanner SB, Frevert U, Parsons M: A major tyrosine-phosphorylated protein of Trypanosoma brucei is a nucleolar RNA-binding protein. J Biol Chem 1996; 271: 15675-15681.
    • (1996) J Biol Chem , vol.271 , pp. 15675-15681
    • Das, A.1    Peterson, G.C.2    Kanner, S.B.3    Frevert, U.4    Parsons, M.5
  • 24
    • 0024829844 scopus 로고
    • Alternative splicing in the control of gene expression
    • Smith CW, Patton JG, Nadal Ginard B: Alternative splicing in the control of gene expression. Annu Rev Genet 1989; 23: 527-577.
    • (1989) Annu Rev Genet , vol.23 , pp. 527-577
    • Smith, C.W.1    Patton, J.G.2    Nadal Ginard, B.3
  • 25
    • 0028139772 scopus 로고
    • Genetic and biochemical analysis of alternative RNA splicing
    • Hodges D, Bernstein SI: Genetic and biochemical analysis of alternative RNA splicing. Adv Genet 1994; 31: 207-281.
    • (1994) Adv Genet , vol.31 , pp. 207-281
    • Hodges, D.1    Bernstein, S.I.2
  • 26
    • 0025048608 scopus 로고
    • Cell-type-specific splicing factors and the regulation of alternative RNA splicing
    • Latchman DS: Cell-type-specific splicing factors and the regulation of alternative RNA splicing. New Biol 1990; 2: 297-303.
    • (1990) New Biol , vol.2 , pp. 297-303
    • Latchman, D.S.1
  • 27
    • 0345432039 scopus 로고    scopus 로고
    • Homology in the human genome between a 3p21.3 region and a region of Xp11.23
    • Timmer T, Van den Berg A, Terpstra P et al: Homology in the human genome between a 3p21.3 region and a region of Xp11.23 [Abstract]. Med Genet 1997; 9: 94-95.
    • (1997) Med Genet , vol.9 , pp. 94-95
    • Timmer, T.1    Van Den Berg, A.2    Terpstra, P.3
  • 28
    • 0030332781 scopus 로고    scopus 로고
    • A probabilistic classification system for predicting the cellular localisation sites of proteins
    • Horton P, Nakai K: A probabilistic classification system for predicting the cellular localisation sites of proteins. ISMB 1996; 4: 109-115.
    • (1996) ISMB , vol.4 , pp. 109-115
    • Horton, P.1    Nakai, K.2
  • 29
    • 0028111863 scopus 로고
    • PROSITE: Recent developments
    • Bairoch A, Bucher P: PROSITE: recent developments. Nucleic Acids Res 1994; 22: 3583-3589.
    • (1994) Nucleic Acids Res , vol.22 , pp. 3583-3589
    • Bairoch, A.1    Bucher, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.