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Volumn 37, Issue 2, 1999, Pages 165-176

Evaluation of different methods for the extraction of DNA from fungal conidia by quantitative competitive PCR analysis

Author keywords

DNA extraction; Fungal conidia; Quantitative competitive PCR; Ribosomal DNA

Indexed keywords

DNA; RIBOSOME DNA;

EID: 0033045617     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0167-7012(99)00061-5     Document Type: Article
Times cited : (71)

References (36)
  • 2
    • 0028233953 scopus 로고
    • A cautionary note on reaction tubes for differential display and cDNA amplification in thermal cycling
    • Chen Z., Swisshelm K., Sager R. A cautionary note on reaction tubes for differential display and cDNA amplification in thermal cycling. BioTechniques. 16:1994;1002-1006.
    • (1994) BioTechniques , vol.16 , pp. 1002-1006
    • Chen, Z.1    Swisshelm, K.2    Sager, R.3
  • 3
    • 0022847331 scopus 로고
    • Cloning and characterization of the ribosomal RNA genes of the dimorphic yeast, Yarrowia lipolytica
    • Clare J.J., Davidow L.S., Gardner D.C., Oliver S.G. Cloning and characterization of the ribosomal RNA genes of the dimorphic yeast, Yarrowia lipolytica. Curr. Genet. 10:1986;449-452.
    • (1986) Curr. Genet. , vol.10 , pp. 449-452
    • Clare, J.J.1    Davidow, L.S.2    Gardner, D.C.3    Oliver, S.G.4
  • 4
    • 0028911129 scopus 로고
    • Quantitative PCR techniques and applications
    • Cross N.C.P. Quantitative PCR techniques and applications. Br. J. Haematol. 89:1995;693-697.
    • (1995) Br. J. Haematol. , vol.89 , pp. 693-697
    • Cross, N.C.P.1
  • 6
    • 0002230862 scopus 로고
    • Health implications of fungi in indoor environments - an overview
    • R.A. Samson, B. Flannigan, M.E. Flannigan, A.P. Verhoeff, O.C.G. Adan, Hoekstra E.S. Amsterdam: Elsevier
    • Flannigan B., Miller J.D. Health implications of fungi in indoor environments - an overview. Samson R.A., Flannigan B., Flannigan M.E., Verhoeff A.P., Adan O.C.G., Hoekstra E.S. Health Implications of Fungi in Indoor Environments. Air Quality Monographs. 2:1994;3-28 Elsevier, Amsterdam.
    • (1994) Health Implications of Fungi in Indoor Environments. Air Quality Monographs , vol.2 , pp. 3-28
    • Flannigan, B.1    Miller, J.D.2
  • 7
    • 0028819135 scopus 로고
    • Preparation of genomic DNA for RAPD analysis from thick-walled dormant teliospores of Tilletia species
    • Gang D.R., Weber D.J. Preparation of genomic DNA for RAPD analysis from thick-walled dormant teliospores of Tilletia species. BioTechniques. 19:1995;92-97.
    • (1995) BioTechniques , vol.19 , pp. 92-97
    • Gang, D.R.1    Weber, D.J.2
  • 8
    • 0024201013 scopus 로고
    • Organization of ribosomal RNA genes in the fungus Cochliobolus heterostrophus
    • Garber R.C., Turgeon B.G., Selker E.U., Yoder O.C. Organization of ribosomal RNA genes in the fungus Cochliobolus heterostrophus. Curr. Genet. 14:1988;573-582.
    • (1988) Curr. Genet. , vol.14 , pp. 573-582
    • Garber, R.C.1    Turgeon, B.G.2    Selker, E.U.3    Yoder, O.C.4
  • 9
    • 0001524736 scopus 로고
    • Identification of indigenous and introduced symbiotic fungi in ectomycorrhize by amplification of nuclear and mitochondrial ribosomal DNA
    • Gardes M., White T.J., Fortin J.A., Bruns T., Taylor J.W. Identification of indigenous and introduced symbiotic fungi in ectomycorrhize by amplification of nuclear and mitochondrial ribosomal DNA. Can. J. Bot. 69:1991;180-190.
    • (1991) Can. J. Bot. , vol.69 , pp. 180-190
    • Gardes, M.1    White, T.J.2    Fortin, J.A.3    Bruns, T.4    Taylor, J.W.5
  • 10
    • 0032420067 scopus 로고    scopus 로고
    • Identification of putative sequence specific PCR primers for detection of the toxigenic fungal species Stachybotrys chartarum
    • Haugland R.A., Heckman J.L. Identification of putative sequence specific PCR primers for detection of the toxigenic fungal species Stachybotrys chartarum. Molec. Cell. Probes. 12:1998;387-396.
    • (1998) Molec. Cell. Probes , vol.12 , pp. 387-396
    • Haugland, R.A.1    Heckman, J.L.2
  • 13
    • 0031239524 scopus 로고    scopus 로고
    • Organization of ribosomal DNA in the ascomycete Leptosphaeria maculans
    • Howlett B.J., Rolls B.D., Cozijnsen A.J. Organization of ribosomal DNA in the ascomycete Leptosphaeria maculans. Microbiol. Res. 152:1997;261-267.
    • (1997) Microbiol. Res. , vol.152 , pp. 261-267
    • Howlett, B.J.1    Rolls, B.D.2    Cozijnsen, A.J.3
  • 15
    • 0029876285 scopus 로고    scopus 로고
    • Health effects of indoor air microorganisms
    • Husman T. Health effects of indoor air microorganisms. Scand. J. Work. Environ. Health. 22:1996;5-13.
    • (1996) Scand. J. Work. Environ. Health. , vol.22 , pp. 5-13
    • Husman, T.1
  • 16
  • 17
    • 0031917054 scopus 로고    scopus 로고
    • Small-scale isolation of genomic DNA from Streptomyces mycelia or spores
    • Kutchma A.J., Roberts M.A., Knabel D.B., Crawford D.L. Small-scale isolation of genomic DNA from Streptomyces mycelia or spores. BioTechniques. 24:1998;452-456.
    • (1998) BioTechniques , vol.24 , pp. 452-456
    • Kutchma, A.J.1    Roberts, M.A.2    Knabel, D.B.3    Crawford, D.L.4
  • 18
    • 0001616718 scopus 로고
    • Detection of Phytophthora species by oligonucleotide hybridization to amplified ribosomal DNA spacers
    • Lee S.B., White T.J., Taylor J.W. Detection of Phytophthora species by oligonucleotide hybridization to amplified ribosomal DNA spacers. Phytopathology. 83:1993;177-181.
    • (1993) Phytopathology , vol.83 , pp. 177-181
    • Lee, S.B.1    White, T.J.2    Taylor, J.W.3
  • 19
    • 0000856986 scopus 로고
    • Isolation of DNA from fungal mycelia and single spores
    • M.A. Innis, D.H. Gelfand, J.J. Sninsky, & T.J. White. San Diego: Academic Press
    • Lee S.B., Taylor J.W. Isolation of DNA from fungal mycelia and single spores. Innis M.A., Gelfand D.H., Sninsky J.J., White T.J. PCR Protocols: A Guide to Methods and Applications. 1990;282-287 Academic Press, San Diego.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 282-287
    • Lee, S.B.1    Taylor, J.W.2
  • 20
    • 0028834086 scopus 로고
    • Oligonucleotides with fluorescent dyes at opposite ends provide a quenched probe system useful for detecting PCR product and nucleic acid hybridization
    • Livak K.J., Flood S.J., Marmaro J., Giusti W., Deetz K. Oligonucleotides with fluorescent dyes at opposite ends provide a quenched probe system useful for detecting PCR product and nucleic acid hybridization. PCR Methods Appl. 4:1995;357-362.
    • (1995) PCR Methods Appl. , vol.4 , pp. 357-362
    • Livak, K.J.1    Flood, S.J.2    Marmaro, J.3    Giusti, W.4    Deetz, K.5
  • 22
    • 84869038370 scopus 로고
    • Microbial activity in relation to soil humic formation
    • Martin J.P., Haider K. Microbial activity in relation to soil humic formation. Soil Sci. 111:1971;54-63.
    • (1971) Soil Sci. , vol.111 , pp. 54-63
    • Martin, J.P.1    Haider, K.2
  • 23
    • 0026495490 scopus 로고
    • A simple and efficient protocol for isolation of high molecular weight DNA from filamentous fungi, fruit bodies, and infected plant tissues
    • Moller E.M., Bahnweg G., Sandermann H., Geiger H.H. A simple and efficient protocol for isolation of high molecular weight DNA from filamentous fungi, fruit bodies, and infected plant tissues. Nucleic Acids Res. 20:1992;6115-6116.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 6115-6116
    • Moller, E.M.1    Bahnweg, G.2    Sandermann, H.3    Geiger, H.H.4
  • 24
    • 2642626628 scopus 로고    scopus 로고
    • Rapid extraction of genomic DNA from medically important yeasts and filamentous fungi by high-speed cell disruption
    • Muller F.-M.C., Werner K.E., Kasai M., Francesconi A., Chanock S.J., Walsh T.J. Rapid extraction of genomic DNA from medically important yeasts and filamentous fungi by high-speed cell disruption. J. Clin. Microbiol. 36:1998;1625-1629.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 1625-1629
    • Muller, F.-M.C.1    Werner, K.E.2    Kasai, M.3    Francesconi, A.4    Chanock, S.J.5    Walsh, T.J.6
  • 26
    • 0031304806 scopus 로고    scopus 로고
    • Rapid molecular detection of microbial pathogens: Breakthroughs and challenges
    • Pillai S.D. Rapid molecular detection of microbial pathogens: breakthroughs and challenges. Arch. Virol. Suppl. 13:1997;67-82.
    • (1997) Arch. Virol. Suppl. , vol.13 , pp. 67-82
    • Pillai, S.D.1
  • 27
    • 0015663835 scopus 로고
    • An appraisal of identification methods for Penicillium species: Novel taxonomic criteria based on temperature and water relations
    • Pitt J.I. An appraisal of identification methods for Penicillium species: novel taxonomic criteria based on temperature and water relations. Mycologia. 65:1973;1135-1157.
    • (1973) Mycologia , vol.65 , pp. 1135-1157
    • Pitt, J.I.1
  • 28
    • 0001654377 scopus 로고
    • The joint assessment of normality of several independent samples
    • Shapiro S.S., Wilk M.B. The joint assessment of normality of several independent samples. Technometrics. 10:1968;825-839.
    • (1968) Technometrics , vol.10 , pp. 825-839
    • Shapiro, S.S.1    Wilk, M.B.2
  • 30
    • 0017283726 scopus 로고
    • A volumetric study of winter fungus prevalence in the air of midwestern homes
    • Solomon W.R. A volumetric study of winter fungus prevalence in the air of midwestern homes. J. Allergy Clin. Immunol. 57:1976;46-55.
    • (1976) J. Allergy Clin. Immunol. , vol.57 , pp. 46-55
    • Solomon, W.R.1
  • 32
    • 0030940288 scopus 로고    scopus 로고
    • Health risk assessment of fungi in home environments
    • Verhoeff A.P., Burge H.A. Health risk assessment of fungi in home environments. Ann. Allergy Asthma Immunol. 78:1997;544-554.
    • (1997) Ann. Allergy Asthma Immunol. , vol.78 , pp. 544-554
    • Verhoeff, A.P.1    Burge, H.A.2
  • 33
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • M.A. Innis, D.H. Gelfand, T.J. Sninsky, & T.J. White. San Diego: Academic Press
    • White T.J., Bruns T., Lee S., Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Innis M.A., Gelfand D.H., Sninsky T.J., White T.J. PCR Protocols: A Guide to Methods and Applications. 1990;315-322 Academic Press, San Diego.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4
  • 34
    • 0030748867 scopus 로고    scopus 로고
    • Inhibition and facilitation of nucleic acid amplification
    • Wilson I.G. Inhibition and facilitation of nucleic acid amplification. Appl. Environ. Microbiol. 63:1997;3741-3751.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3741-3751
    • Wilson, I.G.1
  • 35
    • 1442320908 scopus 로고
    • Airborne fungal populations in non-residential buildings in the United States
    • Yang C.S., Hung L.-L., Lewis F.A., Zamppiello F.A. Airborne fungal populations in non-residential buildings in the United States. Proc. Indoor Air. 4:1993;219-224.
    • (1993) Proc. Indoor Air. , vol.4 , pp. 219-224
    • Yang, C.S.1    Hung, L.-L.2    Lewis, F.A.3    Zamppiello, F.A.4
  • 36
    • 0029778731 scopus 로고    scopus 로고
    • Technical aspects of quantitative competetive PCR
    • Zimmermann K., Mannhalter J.W. Technical aspects of quantitative competetive PCR. Biotechniques. 21:1996;268-279.
    • (1996) Biotechniques , vol.21 , pp. 268-279
    • Zimmermann, K.1    Mannhalter, J.W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.