DNA methyltransferases as probes of chromatin structure in vivo

Methods in Enzymology

Volumn 304, Issue , 1999, Pages 431-447

  Kladde, Michael P ^a   Xu, M ^a   Simpson, Robert T ^a  

^a NONE

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; CYTOSINE; DNA; ENDONUCLEASE;

ANIMAL CELL; ARTICLE; BACILLUS SUBTILIS; CHROMATIN STRUCTURE; CHROMOSOME STRUCTURE; DEAMINATION; DNA FOOTPRINTING; DNA MODIFICATION; DNA PROBE; ESCHERICHIA COLI; GENE EXPRESSION; MUTAGENESIS; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN METHYLATION; SACCHAROMYCES CEREVISIAE; YEAST;

ANIMALIA; BACILLUS SUBTILIS; ESCHERICHIA COLI; SACCHAROMYCES CEREVISIAE;

EID: 0033000672     PISSN: 00766879     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S0076-6879(99)04026-4     Document Type: Article

References (36)

1. S. Hattman, C. Kenny, L. Berger, and K. Pratt, J. Bacteriol. 135, 1156 (1978).
2. J. H. Proffitt, J. R. Davie, D. Swinton, and S. Hattman, Mol. Cell. Biol. 4, 985 (1984).
3. J. E. Brooks, R. M. Blumenthal, and T. R. Gingeras, Nucleic Acids Res. 11, 837 (1983).
4. Z. Fehér, A. Kiss, and P. Venetianer, Nature 302, 266 (1983).
5. M. F. Hoekstra and R. E. Malone, Mol. Cell. Biol. 5, 610 (1985).
6. Z. Fehér, S. L. Schlagman, Z. Miner, and S. Hattman, Gene 74, 193 (1988).
7. M. F. Hoekstra and R. E. Malone, Mol. Cell. Biol. 6, 3555 (1986).
8. D. E. Gottschling, Proc. Natl. Acad. Sci. U.S.A. 89, 4062 (1992).
9. M. P. Kladde and R. T. Simpson, Nucleic Acids Res. 26, 1354 (1998).
10. J. Singh and A. J. S. Klar, Genes Dev. 6, 186 (1992).
11. M. P. Kladde and R. T. Simpson, Proc. Natl. Acad. Sci. U.S.A. 91, 1361 (1994).
12. S. Y. Roth, A. Dean, and R. T. Simpson, Mol. Cell. Biol. 10, 2247 (1990).
13. M. Shimizu, S. Y. Roth, C. Szent-Gyorgyi, and R. T. Simpson, EMBO J. 10, 3033 (1991).
14. M. P. Kladde and R. T. Simpson, Methods Enzymol. 274, 214 (1996).
15. K. I. Pratt and S. Hattman, Mol. Cell. Biol. 1, 600 (1981).
16. J. L. Campbell and N. Kleckner, Cell 62, 967 (1990).
17. M. X. Wang and G. M. Church, Nature 360, 606 (1992).
18. S. Lacks and B. Greenburg, J. Biol. Chem. 250, 4060 (1975).
19. S. Lacks and B. Greenburg, J. Mol. Biol. 114, 153 (1977).
20. M. Frommer, L. E. MacDonald, D. S. Millar, C. M. Collis, F. Watt, G. W. Grigg, P. L. Molloy, and C. L. Paul, Proc. Natl. Acad. Sci. U.S.A. 89, 1827 (1992).
21. S. J. Clark, J. Harrison, C. L. Paul, and M. Frommer, Nucleic Acids Res. 22, 2990 (1994).
22. H. Hayatsu, Y. Wataya, K. Kai, and S. Iida, Biochemistry 9, 2858 (1970).
23. H. Hayatsu, Prog. Nucleic Acids Res. 16, 75 (1976).
24. P. Renbaum, D. Abrahamove, A. Fainsod, G. Wilson, S. Rottem, and A. Razin, Nucleic Acids Res. 18, 1145 (1990).
25. M. P. Kladde, M. Xu, and R. T. Simpson, EMBO J. 15, 6290 (1996).
26. M. D. Rose, F. Winston, and P. Hieter, "Methods in Yeast Genetics: A Laboratory Course Manual." Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1990.
27. Q. Chou, M. Russell, D. Birch, J. Raymond, and W. Bloch, Nucleic Acids Res. 20, 1717 (1992).
28. K. J. Breslauer, R. Frank, H. Blocker, and L. A. Markey, Proc. Natl. Acad. Sci. U.S.A. 83, 3746 (1986).
29. M. Xu, R. T. Simpson, and M. P. Kladde, Mol. Cell. Biol. 18, 1201 (1998).
30. R. T. Simpson, Nature 343, 387 (1990).
31. K. J. Polach and J. Widom, J. Mol. Biol. 254, 130 (1995).
32. K. J. Polach and J. Widom, J. Mol. Biol. 258, 800 (1996).
33. M. R. Murphy, M. Shimizu, S. Y. Roth, A. M. Dranginis, and R. T. Simpson, Nucleic Acids. Res. 21, 3295 (1993).
34. M. Hochstrasser, M. J. Ellison, V. Chau, and A. Varshavsky, Proc. Natl. Acad. Sci. U.S.A. 88, 4606 (1991).
35. M. Nelson, Y. Zhang, and J. L. Van Etten, in "DNA Methylation: Molecular Biology and Biological Significance" (J. P. Jost and H. P. Saluz, eds.), p. 186. Birkhäuser Verlag, Basel, 1993.
36. S. L. Shields, D. E. Burbank, R. Grabherr, and J. L. Van Etten, Virology 176, 16 (1990).