-
1
-
-
0021586472
-
Rapid calculation of first and second derivatives of conformational energy with respect to dihedral angles for proteins. General recurrent equations
-
Abe H, Braun W, Noguti T, Go N (1984) Rapid calculation of first and second derivatives of conformational energy with respect to dihedral angles for proteins. General recurrent equations. Comput Chem 8:239-247
-
(1984)
Comput Chem
, vol.8
, pp. 239-247
-
-
Abe, H.1
Braun, W.2
Noguti, T.3
Go, N.4
-
2
-
-
84986513563
-
Representation of the molecular electrostatic potential by a net atomic charge model
-
Cox SR, Williams DE (1981) Representation of the molecular electrostatic potential by a net atomic charge model. J Comput Chem 2:304-323
-
(1981)
J Comput Chem
, vol.2
, pp. 304-323
-
-
Cox, S.R.1
De Williams2
-
3
-
-
0026107642
-
Molecular dynamic simulations of small peptides: Dependence on dielectric model and pH
-
Daggett V, Kollman PA, Kuntz ID (1991) Molecular dynamic simulations of small peptides: dependence on dielectric model and pH. Biopolymers 31:285-304
-
(1991)
Biopolymers
, vol.31
, pp. 285-304
-
-
Daggett, V.1
Kollman, P.A.2
Kuntz, I.D.3
-
4
-
-
0024599312
-
Defintions and nomenclature of nucleic acids structure components
-
Dickerson RE, Bansal M, Calladine CR, Diekmann S, Hunter WN, Kennard O, Kitzing E von, Lavery R, Nelson HCM, Olson WK, Saenger W, Shakked Z, Sklenar H, Soumpasis DM, Tung CS, Wang AHJ, Zhurkin VB (1989) Defintions and nomenclature of nucleic acids structure components. Nuclejic Acids Res 17:1797-1803
-
(1989)
Nuclejic Acids Res
, vol.17
, pp. 1797-1803
-
-
Dickerson, R.E.1
Bansal, M.2
Calladine, C.R.3
Diekmann, S.4
Hunter, W.N.5
Kennard, O.6
Von Kitzing, E.7
Lavery, R.8
Nelson, H.C.M.9
Olson, W.K.10
Saenger, W.11
Shakked, Z.12
Sklenar, H.13
Soumpasis, D.M.14
Tung, C.S.15
Wang, A.H.J.16
Zhurkin, V.B.17
-
5
-
-
36149010019
-
Some studies concerning rotating axes and polyatomic molecules
-
Eckart C (1935) Some studies concerning rotating axes and polyatomic molecules. Phys Rev 47:552-558
-
(1935)
Phys Rev
, vol.47
, pp. 552-558
-
-
Eckart, C.1
-
6
-
-
0020771265
-
Dynamics of a small globular protein in terms of low-frequency vibrational modes
-
Go N, Noguti T, Nishikawa T (1983) Dynamics of a small globular protein in terms of low-frequency vibrational modes. Proc Natl Acad Sci USA 80:3696-3700
-
(1983)
Proc Natl Acad Sci USA
, vol.80
, pp. 3696-3700
-
-
Go, N.1
Noguti, T.2
Nishikawa, T.3
-
7
-
-
0019848366
-
Intramolecular flexibility in phenylalanine transfer RNA
-
Harvey SC, McCammon JA (1981) Intramolecular flexibility in phenylalanine transfer RNA. Nature 294:286-287
-
(1981)
Nature
, vol.294
, pp. 286-287
-
-
Harvey, S.C.1
McCammon, J.A.2
-
8
-
-
0027186150
-
Normal mode analysis of mouse epidermal growth factor: Characterization of the harmonic motion
-
Ikura T, Go N (1993) Normal mode analysis of mouse epidermal growth factor: characterization of the harmonic motion. Proteins 16:423-436
-
(1993)
Proteins
, vol.16
, pp. 423-436
-
-
Ikura, T.1
Go, N.2
-
9
-
-
0016911248
-
Three-dimensional structure of transfer RNA
-
Kim SH (1976) Three-dimensional structure of transfer RNA. Prog Nucleic Acid Res Mol Biol 17:181-216
-
(1976)
Prog Nucleic Acid Res Mol Biol
, vol.17
, pp. 181-216
-
-
Kim, S.H.1
-
10
-
-
0030901493
-
Mechanical property of a TIM-barrel protein
-
Kobayashi N, Yamato T, Go N (1997) Mechanical property of a TIM-barrel protein. Proteins 28:109-116
-
(1997)
Proteins
, vol.28
, pp. 109-116
-
-
Kobayashi, N.1
Yamato, T.2
Go, N.3
-
12
-
-
0032576192
-
Accurate DNA dynamics without accurate long-range electrostatics
-
Mazur AK (1998) Accurate DNA dynamics without accurate long-range electrostatics. J Am Chem Soc 120:10928-10937
-
(1998)
J am Chem Soc
, vol.120
, pp. 10928-10937
-
-
Mazur, A.K.1
-
13
-
-
0028359395
-
Dynamics of transfer RNAs analyzed by normal mode calculation
-
Nakamura S, Doi J (1994) Dynamics of transfer RNAs analyzed by normal mode calculation. Nucleic Acids Res 22:514-521
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 514-521
-
-
Nakamura, S.1
Doi, J.2
-
14
-
-
0023613529
-
Normal mode of vibration in bovine pancreatic trypsin inhibitor and its mechanical property
-
Nishikawa T, Go N (1987) Normal mode of vibration in bovine pancreatic trypsin inhibitor and its mechanical property. Proteins 2:308-329
-
(1987)
Proteins
, vol.2
, pp. 308-329
-
-
Nishikawa, T.1
Go, N.2
-
15
-
-
0020813608
-
Dynamics of native globular proteins in terms of dihedral angle
-
Noguti T, Go N (1983a) Dynamics of native globular proteins in terms of dihedral angle. J Phys Soc Jpn 52:3283-3288
-
(1983)
J Phys Soc Jpn
, vol.52
, pp. 3283-3288
-
-
Noguti, T.1
Go, N.2
-
16
-
-
0020831001
-
A method of rapid calculation of a second derivative matrix of conformational energy for large molecules
-
Noguti T, Go N (1983b) A method of rapid calculation of a second derivative matrix of conformational energy for large molecules. J Phys Soc Jpn 52:3685-3690
-
(1983)
J Phys Soc Jpn
, vol.52
, pp. 3685-3690
-
-
Noguti, T.1
Go, N.2
-
17
-
-
0000777707
-
Energetic coupling between DNA bending and base pair opening
-
Ramstein J, Lavery R (1988) Energetic coupling between DNA bending and base pair opening. Proc Natl Acad Sci USA 85:7231-7235
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 7231-7235
-
-
Ramstein, J.1
Lavery, R.2
-
18
-
-
84986468608
-
An approach to computing electrostatic charges for molecules
-
Singh UC, Kollman PA (1984) An approach to computing electrostatic charges for molecules. J Comput Chem 5:129-145
-
(1984)
J Comput Chem
, vol.5
, pp. 129-145
-
-
Singh, U.C.1
Kollman, P.A.2
-
20
-
-
0003118369
-
Analytic theory of pseudo-rotation in five-membered rings. Cyclopentane, tetrahydrofuran, ribose and deoxyribose
-
Tomimoto M, Go N (1995) Analytic theory of pseudo-rotation in five-membered rings. Cyclopentane, tetrahydrofuran, ribose and deoxyribose. J Phys Chem 99:563-577
-
(1995)
J Phys Chem
, vol.99
, pp. 563-577
-
-
Tomimoto, M.1
Go, N.2
-
21
-
-
0344453576
-
Conformational analysis of nucleic acid molecules with flexible furanose rings in dihedral angle space
-
Tomimoto M, Wako H, Go N (1996) Conformational analysis of nucleic acid molecules with flexible furanose rings in dihedral angle space. J Comput Chem 17:910-917
-
(1996)
J Comput Chem
, vol.17
, pp. 910-917
-
-
Tomimoto, M.1
Wako, H.2
Go, N.3
-
22
-
-
84988123096
-
Algorithm for rapid calculation of hessian of conformational energy function of proteins by supercomputer
-
Wako H, Go N (1987) Algorithm for rapid calculation of hessian of conformational energy function of proteins by supercomputer. J Comput Chem 8:625-635
-
(1987)
J Comput Chem
, vol.8
, pp. 625-635
-
-
Wako, H.1
Go, N.2
-
23
-
-
84988053694
-
An all atom force field for simulations of proteins and nucleic acids
-
Weiner SJ, Kollman PA, Nguyen DT, Case DA (1986) An all atom force field for simulations of proteins and nucleic acids. J Comput Chem 7:230-252
-
(1986)
J Comput Chem
, vol.7
, pp. 230-252
-
-
Weiner, S.J.1
Kollman, P.A.2
Nguyen, D.T.3
Case, D.A.4
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